Array 1 395051-395318 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGQU01000002.1 Moraxella lacunata strain NCTC10359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 395051 28 100.0 32 ............................ AAGCACACCTGCGATGATAGCTATCCACATGA 395111 28 100.0 32 ............................ CAAATTTGTTTGTTGCCATGCAAGGCAATCAT 395171 28 100.0 32 ............................ TCCTGATGGTTATATTTGGCTCGACCACCATC 395231 28 100.0 32 ............................ GAGCAAATCTACAACAGCATAACCAAGGGCAA 395291 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 ATTCCACATCGCATAGATGACTTAGAAA # Left flank : TGAAAGCGATAGCGGATGTTGGCGAGCGAGCGACAGGCTATGTGGTGGTGGAGCGTTATCGCCATTATGACTTGGGCAAGCAGGTGGAGCGGTTTGCTGATTTTAAAAATTTGACAGTGGAGCAGGCGTTGGAGCATTGCCTTGCCCACAAGAAAAAAGCCAAAAATTACCCCTTTGTCCGCCTAAAAAGCGAGACCAACCAACGGCAGTATCATCTGCATATCCGCCAATATACGGTCGCCAAGCCACAAACGGGGGTGTTTAACACCTATGGCATTACTAACATTAATGACGAGACCAAGGCAAGCGTTCCGCATTGGTGATTGGGGTTGGTTGTGCCAAAATAAGGGGCATGATACAGGTTTACACTCTTTATTTTTTGACTATTTAAAAACTTGATAAAAATCAAACACTTATAAAAAGGCGAAAAAACATTGGGTAAACGCCCAAAATATGGCTGTAAGCCTTGATATAAGTGGGTTTTATGTTGTATAATTCTT # Right flank : ATTTGGTAGTGGTCTAAAAAGTATGCTGAACTAGGTTTTCCGTTCGCCCTGAGCCTGCCTGCGGGTAGGAAAACCGTTAGGTTTCCCAAGCTCACCACGAACGGTTTTCTTTGTAGCATACTTTTTGAACCAGAGCCTTATTTTTTACATGAAAAATGACTATCCGACCACTTATTTTAAAAAATTACACCCAACAAACTTGATGTTTACTACGGGTTTGTAAAGGTATGCTAGCCTTGTAGAGTGCATACCACACCACTCAAACCCACGCCCATTCATTGCATTTTTCAGATAATCACGCTACAATCATCATACTGCCAGTCCCAAAATCAAGCATAAGCCCAAACCCAAACCGCCATGAAAAAATTCTACCTAATCCGCCACGCCCAATCCGAATCCAACGCAGGACACGCCATTCGTCCAAACCATAAGATTGCCATTACCAAGCTCGGACAAGCCCAAGCGACAGACGTGGCGGACTGGCTCATCACACACGCCCC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCACATCGCATAGATGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 1056928-1056635 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGQU01000001.1 Moraxella lacunata strain NCTC10359, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =========================== ================== 1056927 38 100.0 27 ...................................... TAAGTACGGCAAGGTATTAATACCCTT 1056862 38 100.0 25 ...................................... GAATACTTAAAGAGAGTTGCAACAC 1056799 38 97.4 27 .A.................................... TTACACTCAAATGCAGAACTTTTTACA 1056734 38 97.4 24 C..................................... TTGATAGGGGTGGTGCATGGCTTG 1056672 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== =========================== ================== 5 38 99.0 26 ATATCTACAAACAGTAGAAATTTAAAAGGTCGTTAGAC # Left flank : GGATATTGATGTGACCAGCACTGATGAACAGCGTGCAACCGAGTGGATGAATTATCAGTCATTGGCGGACTTTTTGGACAAAGACGATAAGACCAAAACCGCCGAAGGTTATCCTGCCCCCAAACGGGCGGTCATGATTGCCAAAAAGCCTTAATGTAATTCCAAAAATTGGTATTGTTAAATAAAGATAGATTTTAAGGTTTTCCGTTCGGACTGAGCTTGTCGAAGTCTAGGAAAACCGTTATGGTTCGACAAGCTCACCACGAACGGCTTTCTAGAAAAGTATACTCAATTAACAATACCCAAAAATTTAATAGACTTCTTTCCAACCCCCGATTTTTATAGATTTTTAAAAACTTCAGCCCCAGTGTTTATTTTTAGTTTGGAAAGAGGTTTAATGTTTTTATAAAGATACCCTTAATTTTGAAATGGATTACAATTATTGCGCCTAGAAGTTTAAAAAAATCGTTAGACTTCCAACCAATACGAGAAAATTTGTG # Right flank : CCATTTTGGGGCATTTTTAATGATTTTTTGAGAAATTAGAAGTTTTTTGTACAAAAAATCATCATTTTTACCGCCAAAACATGATAAATCACACATTAAGACTTAGATTTGCAAAGCAAACATTTTTGGGTGTAATTCAAGATTTTTTTATTATAACAAAATTCATTATTTTTTCCAAGGCTTTTTATAAAATCAACAAATCCTCATTGCGATGTTTGGCATGACCAAACCTTAATACTTCACGTTCTGTAAATCGAAAGATAATGACACTGTCCGCCCCTGTAAATAAAGGCTCAAATTCTGCTTTTATTTTTTCGGTGATGATATTTAAAATACGTTCGCTGTTTTGGATTTCATAGACCGAATATTGCAATCTGTCGCCATATTGCATTAGAAATTTGGCAAATCGCCCACGCACTTTATTATCACTGATATCATAACTGACGATTATCATACATCTTCTCCATTTGCTTGCATGTCAAAGTTTGGCAACATCAAAG # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.30, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATCTACAAACAGTAGAAATTTAAAAGGTCGTTAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //