Array 1 1405-114 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTF010000054.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 702468 NCIMB702468-i1-1_scf54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1404 36 100.0 30 .................................... ACAATGACTAGAACATATGGCGTAGACGTA 1338 36 100.0 30 .................................... CATATACTGGAAACTTCCGCGATGCGCTGT 1272 36 100.0 31 .................................... TACGAGCGACGAACTCGATCAGGACATAACA 1205 36 100.0 30 .................................... TAATCCATGGAAATTGTGACATCCATGCAT 1139 36 100.0 30 .................................... GCACTGGACCAAATAAGCTCTGGACAGACG 1073 36 100.0 30 .................................... AAGGGCGATGCTCCCTGTGCTGTCCGGCGT 1007 36 100.0 30 .................................... CCGTGGCAATGCAGGAATCGTCTGGCGTCA 941 36 100.0 30 .................................... TGGCGGCTTTGTCTGGCAATCACAAGCAAT 875 36 100.0 30 .................................... ACGAACAGGTTCAAGCGCTTAAAGACACTT 809 36 100.0 30 .................................... TAGTGTCTTTCAAACTAGCGGCCTGATTAC 743 36 100.0 30 .................................... CCGCGGTCAAAGTGCTCTGTGATCGTCTTT 677 36 100.0 30 .................................... TAGAGACACGTATGTACTGTACTCGCAGTA 611 36 100.0 31 .................................... CCGTTTTGGGTAGATCTTGCGCTTTTGAGAG 544 36 100.0 30 .................................... GAACAGCAATGCTAAATCTGTCGACGCCAA 478 36 100.0 30 .................................... CGGTTGCTTTGGATGCGTACTTGGATAACA 412 36 100.0 30 .................................... GCTCAGTTTACAGCTTGGACGATGTGACTA 346 36 100.0 30 .................................... TTGACAATGACCAGTTTCCCGCGCTCGTAG 280 36 100.0 30 .................................... CTCAAGCCCTCAAGATGGCTTGGGCACAAG 214 36 100.0 30 .................................... AATCCGGCAGCGGCAATGTGGTAACTGGTC 148 35 86.1 0 ..........................C-..A...TT | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.3 30 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATAAGGACCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAGGACCTTGTTGATTGGTACTAGCCTTATATTAAAGCTGTGTTAAAAAATAACG # Right flank : TCCCACACCAAAAATAACTATGAAGCCTTGAAAACTCAATAGTTTAGCCAGTAAATATTCAATTAAGCTACTAGTGATGGCGATAATGCCTCTTGCATGTACTTTGGAAGGCGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //