Array 1 64058-64415 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLLR01000002.1 Lactobacillus sp. LL6 chrom_contig2, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 64058 30 100.0 36 .............................. AGTCCAGCGTAAAGGTAAAGATGACTTGATTTTGCG 64124 30 100.0 35 .............................. GCGACGACGACCGACGACCGACCGACGAGCTGAGT 64189 30 100.0 36 .............................. TAATGGATGAATCAGGTCAAGCTACTGACGCTGGTA 64255 30 100.0 34 .............................. ATTACCGGTTTATCTGGTACTGTTACTAAGATTA 64319 30 100.0 37 .............................. CAGAAAGCACAAGATTACCAATCCTGCTTATAAAAAA 64386 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 36 ATTTACATTTCTCTTAAGTTAAATAAAAAC # Left flank : TTCACACACTTTTTAAGCAAAGGATAATCTAATAACCCCTTTGAAATATTTATCCCTTTTTTACGTAAATAATAAATGTAATACTTTAATTGCCAAATAGCTGCTGGCTCAATTGCATTACTTTTCTTAACTTCATGAACAGTTTGCCAATTTTGAATTAAATCAATATTCACTTGATTATCCATAGCAACATGGTGAAGCCCTTCATTTACATAACTTGTTTTATCAAGTATGTTTCCAAGTTGAACTTTTTGACTAGTCTCTTCAAATTGAATTTGATGAGTAAAGAGCCATAACTTTCTTTTACAAACAAAATAGTAATTTACCATATTTCCAGTAACACGCATTTTTGTATTCGCCTTCTTTTTATAGCACATTATAATGCGCTTCCATATAATTATTACACAACATTAAGAAAATTACGAATAACTGTACATAGAAGTTTCCTTAGGTTAAATAAAAATTTTTCTTGTATTTATTACTCCCCTATTAGTAAACGG # Right flank : CTCTAAGCTAATTTTTACCTGCTGCCACAATAATTATAGACCTATTTCTGTCTATCTGTCTAATTTAACTAAAAAATACACCATAATTTTCAAATTTTTCATCAAATCCTTTTATAGCAACATCTATAACATCTGTCTAACTACAGGTATAATTCACTTATTGGACATCGACAGACTTTAAATAAAATTATCATCTTCTTCCTCTTTTGACTTATTCAAAGATAACCCCGTTTCTGAATTATAGTTAAAAGCTTTAGATAGAATGATATATCCCACCTCTTGTAAATCTCCATTTTTAACTAGGTCACTTTTATCAAGTAGATAAACAGGAAAACTTACAGTCATAGAATTTAAATAATTTTTTAGTTTTAAATTTTCTATTTTCAACTTTGTAATATCATTTGAATTTTTGTTTTCGTTCTTATATAAAACTCTTATTTTTTGTTTATTACGATCAAGTTGAATCAACTTATCTGTAATTTCAACCTTATTATCTAAGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTTCTCTTAAGTTAAATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 120936-121495 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLLR01000002.1 Lactobacillus sp. LL6 chrom_contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 120936 30 100.0 37 .............................. GCTTGTTGGTGCAATTGCTTGAATTCATTTGTAACCC 121003 30 100.0 37 .............................. TTTGTCGTTTTTCGGATTGCCTAAATCCTATCATACG 121070 30 100.0 35 .............................. ACAGCAATTTGTGCTAGTGCTAAAACAGCGTGTTG 121135 30 100.0 37 .............................. CATAGTCATCATGCGGTGCATTAGGGAAGTTAACAAT 121202 30 100.0 36 .............................. AATTGTTGTACCATCTTTGAATAAAAGAGTAATTTT 121268 30 100.0 36 .............................. TACGTTTTGATGATTTTCTCAAGGTCCCCTTTTCTT 121334 30 100.0 35 .............................. TGAATTATCTGGAGTTTGGCCACTGGTTTATGTTC 121399 30 100.0 37 .............................. GCGAAAGATATGGTTGTACACTTTGTTGCTATTACTG 121466 30 83.3 0 ....................A...A.TGG. | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 98.1 36 GTTTTTATTTAACTTAAGAGGAATGTAAAT # Left flank : TAGAGTAGGGATGGTATTGATAAAATACATGATAGTAGCCTTTAAAGTAGCAAAGACCATTTGGATCGTTTAGCCAACCGCCATTAGTTGCAATGTGATAACTAGGTCTATAGCGATTGTTAGTAATATGAACAATTTTATTTGAATTAAGTTGTTTCATTGTTTAGTCTCCTTAATTTATTTTTTTGTTTGTTGTTAGCGCTTACATAATTGATGGTAGTTCTAATACACTTATATGTCAAGCGCATAACACAAAAAAATAAAAAGATATATTATGCGTATAACATATTTAAGGGAATAAACAATAAATGGATTATTATTTATATCTGTCGATGTATAGTACCGTAGTATTTAAGGGACATCGACAGATGCTGTAAATATTAATCTTATAGGATTCTATAAAAAAGTTGTATTTTTTGTATTTTATTTTTATAACAATTAGACAAATCGACAGAATATGTCCTATAATACTTAGTATGACAAGGTTGATTATAGGCAGA # Right flank : TATTTGTATATGTTTTTAAAGCTCCTAAATTGTATGTTTCAATAAGAATTTAAAATGCATTTATTTGTTAGGAGTTGAGAGTATATAATACCCTTCAAAAGAAGCAGATTTCTTTTGAGGGTATTTTTGTAATTAAATAAGTCCTTAATTTTGTGATTAGAGACAGTATAGATAATATAATTGTCTTCATGTGTTTATTATCAATATAGGATAGTTTAAAAATGAAATTATACATAAAAAAGTAGCTCTAAACTAGATTATTAGTAAGTTAGAGCTACTTTTGATGTAAAAATAATTTATTCATTTTCAAAATAATGACTGATTATACATGCTGCAGATTTTGCACAAATAATTAAACAATCTTCGTTCATTAGAAACTTTGGACTATGGTGTGGATGAATACTCCCATCATATGGCTGACAGCCAACATAATAGAAACAAGCTGGAACTTTTTCACTATAATATGCAAAATCTTCAGATGGAGTAATTGGACCACTATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //