Array 1 545423-547499 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053343.1 Lactobacillus helveticus strain LH2020 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 545423 30 100.0 36 .............................. TAGTAAGTGATAAAGATGAAGTTTACTTGCCACAAG 545489 30 100.0 35 .............................. TGCAACACCAGCATTACTTGCATCAATTACTAAGT 545554 30 100.0 37 .............................. TACCAACTTTCATATAACGGTTTTGTTTTTTATCTTC 545621 30 100.0 35 .............................. CTTTAAAAAAAGCGTCTTACATTGTTTACCATTGG 545686 30 100.0 35 .............................. TTTATAATATCCTGCGCTCTTGACTGAATTATTTC 545751 30 100.0 36 .............................. CAAAATGGTCGATCAAGGTAAAATACCTTTGATTGA 545817 30 100.0 37 .............................. TAATGAGTTGTCACTATTGCGTTTCATAAATAGAGGC 545884 30 100.0 37 .............................. TTATCCAGATGGCTACTTTGATCGTGATGCTTGTCCC 545951 30 100.0 37 .............................. ATGCCATACTTGTCGGAAACACCGTAGTACTTTTCGC 546018 30 100.0 36 .............................. TTGTGCTTTGGTAACTGGCAACGTCCACACCATAGC 546084 30 100.0 36 .............................. TTATAAATATCATCATAGGCATCAATTAGACCCTTG 546150 30 100.0 35 .............................. TCTTTTTTAACAGCGTTAATTTTATTGCGTTCAAT 546215 30 100.0 36 .............................. ACATCAATTTGAGGAGGAACAGTAGCTACATACCCT 546281 30 100.0 36 .............................. ATCAGGAAGAAAGCCCGAACACCAAACCAAGTGCCA 546347 30 100.0 35 .............................. TATTCGATGTAGTCATCATAAATACAAATGGTTGG 546412 30 100.0 35 .............................. TAGCTTCTTTTTGATACGATTGAGCTTGACATCAC 546477 30 100.0 36 .............................. CTTGGCTTACCTTGACTAACTCCGCTTCAAAAGGGC 546543 30 100.0 35 .............................. AGATTTTCCAGCTTGTGTTGGTATTAATGTATTTT 546608 30 100.0 35 .............................. TGGCTTAATTCATGCGTACTATGCACCAGATCAAG 546673 30 100.0 37 .............................. TAATGTTGTTAATACTGTTAATGGCGATGACTGGTAC 546740 30 100.0 36 .............................. AAATAAAATACACGGTAATAAGTGGAAACCACTATT 546806 30 100.0 36 .............................. ATAAAATACACGGTAATAAGTGGAAACCACTATTAG 546872 30 100.0 37 .............................. TAGCAATAATATCCACTAAATTTCAAACTGCCAAACA 546939 30 100.0 36 .............................. GCATTTGAGATTTAACAACACGTGTCATACCGGGAA 547005 30 100.0 36 .............................. GAATTAATTAAGTTGTTGGTCTTTAATGAGTTGTTA 547071 30 100.0 37 .............................. TGGAATAAGTCTTTGCGGATTTCATTGGTAAGCTTAG 547138 30 100.0 36 .............................. TGTTAAAAACGCAGAAGAAGCTCACTCAATGACCGT 547204 30 100.0 36 .............................. TACTTTGGCGAGATGGGACTAACTAACATTTTAACC 547270 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 547336 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 547404 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 547470 30 73.3 0 .A......C.......G...G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 32 30 98.3 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : TGTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATGAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //