Array 1 219473-217436 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOLT010000002.1 Enterococcus faecalis strain 18RL1-45 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 219472 37 97.3 31 ....................................A CTGCTCATTCGTTTTCTCCTCCTAACACGCT 219404 37 97.3 29 ....................................C AGCGCCGGAAAAGTAGCAAGCCCCACAGT 219338 37 97.3 29 ....................................A CGTGCCTTCAAATCCAAAAAAGGTTTGTT 219272 37 100.0 29 ..................................... GGCTTGTAATGCCTGAGTTACAGTCTTCT 219206 37 97.3 29 ....................................A AACACTTCTTCTGCTAAAACAACATTTTC 219140 37 97.3 29 ....................................A TCGTTAATTGATGATGTAGCCAACGCCAT 219074 37 97.3 29 ....................................A CCACTTGAACGGAATACTGGAACGTTTTC 219008 37 97.3 29 ....................................A GGGATTGTTGGGATTAGTGAAACATCTGT 218942 37 100.0 29 ..................................... GTTCTGTAAGGCTGTAGATCGGCCGGACT 218876 37 100.0 29 ..................................... GGACTTAACTTCTATAATGACCGGTTAAT 218810 37 97.3 29 ....................................A GTGACAGATGGTAAATCGTTGTTACTTGT 218744 37 97.3 29 ....................................A TTTCCTTTCGTAGTGATCACAAAATTTTC 218678 37 97.3 29 ....................................A CCAGAAATAAAAGTTGACGTAAGTATTGA 218612 37 100.0 29 ..................................... AAGGGCAAAACTGAAAACGATACAACGAT 218546 37 97.3 29 ....................................G CTAAAGGATTTTTGATGATGTTTTCTCGT 218480 37 97.3 29 ....................................G GTGTCTATGTTTCGGAAGCCCCTTTCTTG 218414 37 100.0 29 ..................................... GATGAAAACCGATGGTATTTACTTTCACA 218348 37 97.3 29 ....................................C ACTTGTCCAATATGAATGTGTTGTTCTAT 218282 37 100.0 29 ..................................... TAGTTATTGAACCTCAACGCACACCATTG 218216 37 97.3 29 ....................................A TTAAGTTCGACTGGAAGGCTCTTATAGGT 218150 37 100.0 29 ..................................... AATCATGAGTGGGGATCGCTGCTTTATGA 218084 37 100.0 29 ..................................... AATATAGGCGCCTAATCGTTTATAATGAG 218018 37 100.0 29 ..................................... GTTTTAAATTCATACATAACGAAACATGT 217952 37 100.0 29 ..................................... TAGAAAAGACGTGACAGAGCAAACAGCGC 217886 37 97.3 29 ....................................A GGTACAATTTATGGATTGTCACATGTCAT 217820 37 100.0 29 ..................................... GATGAAAACCGATGGTATTTACTTTCACA 217754 37 100.0 29 ..................................... TATGCAGAAAAATTAGAGCAGCTGAAAAA 217688 37 97.3 29 ..................................T.. CTAATGAGCATTCATTACATATGTAGAAC 217622 35 81.1 114 ......................TT.--.CG......G ATATGATTGATGTAAAAATATCATTGATATGTATAAATATGGTTATTATATAAAAAATATAAGTAACGAATTAAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [217590] 217472 37 67.6 0 A...........C...A....TT.CTT...G..T.GA | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 30 37 96.8 32 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : GAGTACGATTAGTTAAATATTTAGTTTTACAGCTATGTTGTTATTATATGTGTTGAACGAAGTTATTGATTTTAAAAGTAGTTGTTCCTCCTTTTTTTATATGCTACAATTTTTCTATATTAATCATTAGTTAAATATTTAAGGAGGTGATTATAATAAGAAGGAAAGGATTTAACAAAATAAAAAAAGAAATGGAATATGTTAAAGTAGTTACGAATTTACTAATGGTATCAAAATTTTTTACGCTACAGTCCGATGAAGATTTACATACATTAACTCTGTTTGGAACATTACTTATTTAATATTTATAGACGCTTTGTAATGAATGCGCTTTCTACGAAACTGGATAATAAAAATTGGCATTTTTCAAATGCTACTTTATGTAGTTTACTTTTTTATAGTGGCTATGTATGTTCGCATTTATTTCTTTTGAATAAAAATCACTTATCTATAAATCAAGAATTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTT # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.23, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //