Array 1 86694-85384 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQTC01000023.1 Escherichia coli strain GN02343 GCID_ECOLID_00041_NODE_13.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 86693 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 86632 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 86571 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 86510 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 86449 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 86388 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 86327 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 86266 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 86205 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 86144 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 86083 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 86022 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 85961 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 85900 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 85839 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 85778 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 85717 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 85656 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 85595 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 85534 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 85473 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 85412 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //