Array 1 2005716-2007148 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTRU01000001.1 Chryseobacterium panacisoli strain Gsoil 183 map unlocalized plasmid unnamed1 Gsoil183-2_scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2005716 47 91.5 30 .......G..................GC..................T AGTTGGTTCGGGATTATGGTGATAAGGAGG 2005793 47 95.7 30 ........C.............C........................ GCACAGCGGATTAAATTCATAGCATCATCA 2005870 47 91.5 30 ..............AA...........C....A.............. GGCTAAACAAATTTTAAATCAAGCGAAATG 2005947 47 97.9 30 .....A......................................... AGGTCACGGGTTCAAGTCCCGTAGTTGGCT 2006024 47 100.0 30 ............................................... AATACATCAACAAAGCAACTTTAACAACCA 2006101 47 100.0 30 ............................................... ATAAACGTGAGAGAGAGGTTCAGTTTACCA 2006178 47 100.0 30 ............................................... TCTAAAGATGTTGTAGTATCTTTTGCTTTT 2006255 47 100.0 30 ............................................... ATCTTTATATTGAGGAATATGATGAAGTAG 2006332 47 100.0 30 ............................................... GTAATTGGCAAATTCTTCATTCGTTAAACC 2006409 47 100.0 30 ............................................... GGAGAACCAATTAATCCAGATTTACTATTA 2006486 47 100.0 30 ............................................... ACGTTCACAAAAAAAGTAGAAAGTAAAGCT 2006563 47 100.0 30 ............................................... TCAGATCAGTACTTCCCCGGATGTTCTTTC 2006640 47 100.0 30 ............................................... GTGCATTAGCAAAAGATGCTTCTGATTTCG 2006717 47 100.0 30 ............................................... TCTGCATGTTTTTCTAAAACCCCAAGCTGT 2006794 47 100.0 30 ............................................... CTCCCGGAGAAAACGGATCCGATGTTCAAT 2006871 47 100.0 30 ............................................... CAGTACGAGAAAGGCAAGGAGGAACAAGAT 2006948 47 100.0 30 ............................................... AAGTAACGCCAATAGATTATATCTCTCTTT 2007025 47 100.0 30 ............................................... ATCAAATAAATGCACAAAGTGGAGAAATTC 2007102 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 98.8 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : AAAAAAGACCATGCTTTGATATCGATCCTTCATTTTTTTGGGATTTTGATTTAGATGCGATGGATTTAGATAAAGCCTATAAATCAATTATTGCCCGTATTGTTGAACGTGGTAATCAAAACGACATTGATAGAATTGTAGAATTTTATACTTACGAAAAAGTATTCAAAGCAATTCGTGACGAAATCCATTTCCTGCCAAATTATGCAATTGATAAAGCTATAGAGTTTTTCCCCGAACTTAAAAAAGAAGAGATGCACTGCTATATTAATCGTAAGGATAAACCATATCATTGGATATAGCTAAGAAAATAGTTATTTGAGCTATAACTAGAAACCAATTATATTTTTGAGAAAACAATTTCTCGTATTAAAAATTGAAAGGTGCTACATTGGAAATAACAATGGCAATAGTAATGGGTGAACGATTATGAATTGCAAAAATTACTATTTTTCCGATCAGCTACAACAGCCTAAAAATCTTTCACGAGACATTGCATA # Right flank : CCTCAAAAAATAATCTACTGAAAACCAGTAGATTATTTTTATATTTAGAATTTAAAATTTAGAATAATTCAAGCTGCTGAAAGGTTGGAGGTGGCTCTTCTTTATTCCTGGCAAAAAAGATTTCAATATCTCCAAATTGTTTGTCCGTGATACACATAATGGCAACTTTCCCAGCTTTTGGAAGCATAAATTTAACTCTTTTAATATGAACCTCAGCATTTTCCCGGCTCGGACAATGGCGTACATACATTGAGAACTGAAACAAGGTGAAACCATCATCAATGAGCGCCTTCCGAAAGCGATTAGCATCTTTCATATTCGCTTTGGTCTCAGTCGGGAGATCATATAATACTAAAACCCACATAATCCGGTATGCGTTAAACCTTTCGGCGTTCATAACAGTTCAGGATAAGAGATCAATCTTTTTTCTCCTGTGTAGCATTTGTAAAGCGATGAAGCCGTCATTTTTACAGCAACAAGCAACGGTCTTGTTTTGTCAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //