Array 1 450-22 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLZ010000010.1 Ruminococcus sp. 210702-SL.1.03 KNMEIJKG_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 449 32 100.0 34 ................................ CTAGTGAATATCACGACAAAGGCGTTTATGGAAA 383 32 100.0 34 ................................ GAATTTCGTCCACTGACGGCAGAAGAAATCGAGG 317 32 100.0 33 ................................ TTTTTACATTTGTTCCCATATCTACTCTTGCGT 252 32 100.0 35 ................................ TGCCAACTGTTTTGACACTATTGCTGTGTCTAATC 185 32 100.0 34 ................................ ATGAGATTCATTTTTCGATCATCTGGTGGCAAAT 119 32 100.0 34 ................................ TTTTGAATCTGGCAAATACTACCACAGGCTCTTC 53 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 7 32 100.0 34 GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Left flank : GAGTACCCATGCTATCTGCTGAAGTAGGTGACAAAAAAATGATGACATTAGTAAGTTATGACGTATCTACAACGGACAACAGCGGCAGAAAGCGGCTGAGAAAAGTCGCAAAAGAGTGCCAGAACTACGGTCAGCGCGTGCAGAACAGCGTTTTTGAGATAGACGTAGACTACGGCACATTTTTGAAGCTGAAAGACAAGCTTTTGAAGATAATAGATCAGCAAGAGGACAGCCTGCGGATATACTATCTCGGCAACAATTGGAAAAACAGGATAGAACATTTCGGCACAAAAGCGGGGTATGATCCTGAAGGCGTGCTGATAATCTGACAGACTGACCGACACCTGCGAAGCGAAAGCGAAACCGATCGCGCGGACGCTTCGCGGCAAATGACCCGCAAAATATCAACGATTTATGAACATCGCGCCGATATTTTGCAAACCAAAAAGGATCGGATCCGTATCATGTGGAGCAAGCGTCCAACTGCAACAACATCTAGG # Right flank : TATGAGATTCATTTTTCGATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.90,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 30075-28977 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLZ010000027.1 Ruminococcus sp. 210702-SL.1.03 KNMEIJKG_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 30074 32 100.0 34 ................................ GATGCCGCCGACAAACGTTGCGACGTCGTCCATC 30008 32 100.0 33 ................................ GTCACCAAAACGCAGCGTAGACAGCCACTCTTC 29943 32 100.0 33 ................................ TTTCTTCGGGCGTGCCGTTGTCCTTGGGCACGC 29878 32 100.0 34 ................................ CTATTTGAGTTGTCCCTATAAGCACTATCTTGGA 29812 32 100.0 38 ................................ GAACTGTGGCGCAGGGCGGCACAGGATAACAGAATAAT 29742 32 100.0 35 ................................ TGCTTCATGAGCTATGTGTTCATCTGAATAGGCTG 29675 32 100.0 36 ................................ ACTATACCGAATTGTGATGGCGGCGCTCTATCTGAG 29607 32 100.0 34 ................................ CGGTCACAAGGGTCTTGATATACGAATTGCCCGT 29541 32 100.0 35 ................................ ATAGGGTTCGGCGGCTGTTTCGCCGAGGCGCACAA 29474 32 100.0 34 ................................ CTTCCGTTGTGAATTGGAAGTGCTTCCTGTTATG 29408 32 100.0 35 ................................ AATATCGCCCCATCTATCTCCGAACCAGTCTCCAA 29341 32 100.0 36 ................................ CCTCAAAATTTATAGGCTTGCCGCTTTTCGTGTAGC 29273 32 100.0 34 ................................ GGTGATCTGGGCCATTGTGTCGGCGGTCTTGTCC 29207 32 100.0 34 ................................ CTACCATTTTGATTGCCATTTCAATCTGTTTATA 29141 32 100.0 34 ................................ GTGATACGGCGGATCGCAGTAAAATAAAGCGTTA 29075 32 100.0 35 ................................ GCCGCGAGATGTGCGAACATCTACTCGCGGCTTGC 29008 32 96.9 0 ...........................T.... | ========== ====== ====== ====== ================================ ====================================== ================== 17 32 99.8 35 GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Left flank : AAACGTTGCGACGTCGTCCAT # Right flank : CGTTCCTGGTTTAATTTTTTGTAGCAAAATCATTAGTCGCCCTCCACATCAAAAAACACCGTCAGACGACCCTTTTTGTGAGGTATCTGACGGTGTTTCTATTTTTTTATCTTTGCTTCAGCGATGAAAAATACTCACACCGCCGTCACTCTCCCCTTATCCGACTTAGCAAGCTTTCCGCTCTCGATGCCCTTTCTTACCGCGTAGCCGATCGTGCTCTCGATCACGCCGCCTGCTCGGGCAAAGCCAAATTTCTTCGCCGTTTCCTTTATCAGGTCGGGCTCGGATAGGCTGATCTGCTCGCTGAGCACCTCGCTCGCGGCGCAGAGTATCTCCTCCGAGGGGATGTTGTCCGCCGTGCGCTTCGCCGATTCGCTGTCAGCGCGATACGCCGAATACTCCTCGGGGCGCTGACCATCGCGCCAAATGAAAACGCGGTCTTCGTCCTGCGTTGCCGTTGCAGGGACGCTGCTCATCACGTCCGTGAAAATACTCTCAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.90,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1307-23 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLZ010000031.1 Ruminococcus sp. 210702-SL.1.03 KNMEIJKG_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1306 32 90.6 34 ACA............................. AGAATCTCGGAGGAAATTAACGATAAAATCGTTA 1240 32 100.0 34 ................................ GACAGCACACCAAGTTGGTGCTATAATAAAATCA 1174 32 100.0 33 ................................ ATGATTGCTTAACGTCAATCGTCGAAGAGCTGG 1109 32 100.0 35 ................................ GGGCTAAATACGGAGGTAACAACGATGAAACTAAT 1042 32 100.0 34 ................................ GGTGTGCTGTCAAGTAGTTTTACATATGTTTTTG 976 32 100.0 34 ................................ ATCGAACACATGCGGTCTAGTTCGTGGGCAAAGT 910 32 100.0 34 ................................ GTCCTTGATTATATTATACCACCAATTTGGTGTG 844 32 100.0 34 ................................ TTTAAAATGGAGTTAGGGGGAATCGAACCCCCGA 778 32 100.0 34 ................................ GTCCGCTGACCCCTGCACGTTCGTTAGCGCTTTC 712 32 100.0 34 ................................ GTCAGAATGGTATTTTAAGCACCTGAAAAAATTG 646 32 100.0 35 ................................ TCATTATAGTACTATTATAATACATTTTGTATTAA 579 32 100.0 32 ................................ GCAGCGATACCCCCTCCGGGCCATGTACGCCG 515 32 100.0 33 ................................ GTGCATGCGAAGTAAGCGAGTCAAGCCGTCTAG 450 32 100.0 34 ................................ GTACAAATGGTTGCAGCTCCGCGCGGATAGGGAC 384 32 100.0 33 ................................ ATTTACAGTCGCGGGAACATCAGTATCAGGAGG 319 32 100.0 33 ................................ TGCCCTGTCTGCGCATGGCGCAGGGCTCTTATG 254 32 100.0 38 ................................ GAGGTTTGTGTCGTCGAGCCGGCGCGCCCAACCCTCCG 184 32 100.0 33 ................................ GAGGAGCAGAGCTGGTGTTGCGGTTTTGGCGAT 119 32 100.0 33 ................................ TAGCTGCTGGAAATGCTGACCCATGTCCCACGC 54 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 20 32 99.5 34 GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Left flank : AAATGCTGAGTTGTAAAGAGGAAAAAGCTCTGTTCAAATAACAGCCGCGCTACTCAAAAGCCTGTATTTTCAAGGGATAGAGACCTTTTAAGTAGCATAGTTGGTTTTAATACCAACCAGTTGGGATTAAATAAAGCAGTTGGTTGGTATATTGGCATTAAAAAATGACCTATTTTCAAGCGGTCGCAACCACTGTTCCAGCAATACTGTTTTAATATTAAAACGCATCTAAACGCCGCATTTTCAAGGGTTTACGAGAAATTAAAACAGTTTTTAAAACGCTAAAACAGATTATAACGGCTAAAATTTAATACCGCCAAAACAGCATTAAAACAGCTATTTTTGGCGGTATTTTTTTGACACCATATATTTACATCATTACACATCAATCAGTTTATTGCACTCCGAAAACGCTGTAATTGCAGGGTTTTTGAGGGTTTTGTATATTTTTCACGCTTACTTACGGATTGTTGCGTTTTTTGGGTTTTGCGCGGCGGGCA # Right flank : TGATGCCGCCGACAAACGTTGCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.90,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 3937-2583 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLZ010000060.1 Ruminococcus sp. 210702-SL.1.03 KNMEIJKG_60, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 3936 32 100.0 34 ................................ GCAGTATTTCTTGAAAAGACGGATAGCGAATCCG 3870 32 100.0 34 ................................ TTTGAGTTCCTGCGCTTTGCGCACTATCGAAATA 3804 32 100.0 38 ................................ CGGCAACTTCTGCTCCTGGAAATCTATTAGATGTTCAA 3734 32 100.0 35 ................................ CTGCTACAGTATAGTTATCAAGTCCGTACCAAATC 3667 32 100.0 34 ................................ AAAATTGTAAACTGAGTAACTCGTTCGCCCCCAA 3601 32 100.0 34 ................................ CGGAATTCCAGAAGACGAAGATTTACCAGTTACA 3535 32 100.0 33 ................................ AAAAATGTAAACTGTGTAACTCAAATGCACCTT 3470 32 100.0 34 ................................ CAAGGCTGATATTACCGCACAGCAGACACACCAC 3404 32 100.0 33 ................................ TTTTTTTGGTTTTTTATAGCCGTTTAGCCCTGC 3339 32 100.0 34 ................................ TTACAGTTGACATATCGAAGTAATAGCGACGACC 3273 32 100.0 34 ................................ TGCTTTCGTCATGCCGCTGGTGTTCATATGCTTT 3207 32 100.0 34 ................................ ATGCCATATGGGTTTATCAATGTAATACTTACCC 3141 32 100.0 34 ................................ CTTCTGAATTTCACATTATAATTCCTTTCTTTTT 3075 32 100.0 33 ................................ TTAGAAATGCTTTCGCTTCCTGCTCCGCCGCCT 3010 32 100.0 34 ................................ CTCATGGACGACCGTTTCGTGAAGCGCGACACAA 2944 32 100.0 33 ................................ TAGTTAATTATCATGCGTTCCATTTGCGTTTAC 2879 32 100.0 35 ................................ TTCTGGGCTTGACCGTTTTTGTTTTCGTATGTCAT 2812 32 100.0 35 ................................ GAATATTTTGGATTTGGGTTTGCTTCGCGGTGTTT 2745 32 100.0 33 ................................ AATAAGCGCAAACAGTTCAGCAACGCGAATAAC 2680 32 100.0 34 ................................ GATCGAAACCTAAAGTACAACCGCTTTCAAAGCT 2614 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 21 32 100.0 34 GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Left flank : TTTTCGATCATCTGGTGGCAAA # Right flank : TCTATATAAAATTTTATGTAAAGCATGAGCTTAACGTCGCGCTTGTTATTTCTCAAGCAAAACCCAAAAAAATTACACTCAAAATACAAAAAAAGCGGTGAAATGTTTCATTTATCCGAAGCACCTCACCGCTTTTATCATGTATGAGATTTTTAAAAACTGCTTTTACAAGGCTACTTTAATACTGTTATAATATCGCTTACATCGCATTTCAACACCTTGCAGATCACTTCAAGTTGTGAAAATTTTAAACTGATAGCTGCGCCTGTGCATAATGCTGAGATCGTAGACGGACGTATACTCGTTTTCTCAGCCAGCTCCGCTTGCGTCATTCCTTTTGCCGCTATTATCTGTTTTAATCGGATCTTTATCATCGTGACCTCCTGTATCCTTTTTACAATCCATAACGCTTTTCGTTATATGTCCTCTAAAAAAAATACTAGAAATTTTTGATTATGACCTCTTTAAAATCTCCCGATGACAAACTGTTGCTCCTCGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCACGTGAGCGCGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.90,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //