Array 1 256316-257821 **** Predicted by CRISPRDetect 2.4 *** >NC_016148.1 Thermovirga lienii DSM 17291, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 256316 30 100.0 33 .............................. CGTCCCGTCGCTCACATTGTGGGCACATTACCA 256379 30 100.0 30 .............................. TGTTTTGGCGCCCGCCACGTTTCGCTATTT 256439 30 100.0 32 .............................. GTTACGCTCACGATAGGCAAGCTCCAGTATTT 256501 30 100.0 33 .............................. ATATTCTTTCGCCCTCAAACCTCAAAGGGCGGC 256564 30 100.0 31 .............................. AAATAAACTGAGCTTTGTTTAGAGTTTCTTT 256625 30 100.0 32 .............................. TAGCGCCGGCATGAAGAAGGGCGCCCCTCCTA 256687 30 100.0 35 .............................. TGCCTCCAACATCTCATATCACTCCTTTTTGTTAT 256752 30 100.0 37 .............................. TTTCTGTTAACTGTCTAGCCCTGACGAAGACCTCTTC 256819 30 100.0 34 .............................. GTCGCTATCGGATATATTCTTAATTTATCATACG 256883 30 100.0 34 .............................. TGTGTCAAGCTCTAATGGTAAAGTCTAAATATTC 256947 30 100.0 37 .............................. CAGTAAACGTCCCAGCCGTCCTCACGTAGCCACTTGA 257014 30 100.0 35 .............................. AACATTTGGTGCAAGGCGTCATCGATGTCGTTAAG 257079 30 100.0 31 .............................. ACCTTTCCAAATATTATATTTTATTGTCAAG 257140 30 100.0 33 .............................. TTCAGCGCTGCAAACGGAAGGATATAGGAGACA 257203 30 100.0 34 .............................. CAATATCCAACCTTTTCATCGCTTATGCGGACAG 257267 30 100.0 38 .............................. GCATCCCATCCTTTCCTTTCTTATTGTCAAGGTACGAT 257335 30 100.0 38 .............................. GTGCACTCCTCCGTACCATTTAGATAGTACGGAGCATA 257403 30 100.0 37 .............................. CTGAAAATATTTTTTCAGCGCTGAATATGGGAGAATG 257470 30 100.0 33 .............................. CCTGATTTGTTCCTGATCCAACTGTGGTAATTG 257533 30 100.0 34 .............................. TACTACACCCCATCCTTTCTTATATTTTCTTGTC 257597 30 100.0 38 .............................. TCGCGCCGATCGGGAGGCGTTGTGAAAAAGAGGAGCCC 257665 30 96.7 32 .............................T TGTTCTCTCTGTATTGATATCTCCCTTTGGCG 257727 30 100.0 35 .............................. CCTTGGACAGCCACCACCTTGCCCACATAGGCAAA 257792 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 99.9 34 GATTCAATCGAACCGATACGGAATGGAAAC # Left flank : GAAGAGGACAGCATAATGATTTTTTCAACGGAATCAGAGTATGCATGGAAGAAAATGATATTAGGTGTAGATAAAAGTTGTATTAGTTACCTGTTGAAATATGGTGGAGGTGAAAAGGATGAGGAACAAGAAGGAAATTAACACGTTCATTATATACGACGTAGGACAAAAAAGGGTGCCTAAAGTGCATAAAGTTTTGTGCAGTTACATGTTTTGGGAGCAAAACAGCGTGTTTTCTGGGAATATATCCAAAGGAATGCTCAAAAAAATTTTATATAAACTTGATGTCATAATTGATACAAAGTGTGATTGTGTTTACTGTTACAGTTTACGATATCCTTATACTCTTCAGGTGGAGCGGTGGGGCAAGTATTCTACCAGATATAGTGAAATAGTGCGCTTGTAGTTGTGGTCTGCCTCCGCGGAGAGTGTTTCTACGCAAACATAGTTCTGTTTTTCACTTATTCTTAAGTCTTGCAAATACTGGTATTATAATAAGG # Right flank : CACTCCTATGCTTTGACTTATCTATGATTTTCGGTGTTTTTTCTAATAGATACCCAAAATGTTTTTCCTTTCCAGTCTCCAAGTCCCTTAAGGCTCTTACATGTCTTTTCTCCGTCTTGTGTGACTACTAAAGCTACACCAATTTCATGAAATTGCCCCGCTAGTGTCCAATTGATGTTTTGTCAATGCTCGAATTTCGGCCTCAGTTTTTGAGGTCTCTCCAATGTTGCGAGATGTTGGAATTCTTGGATTGCCAAACACAAATTTGTGCAAAACTTGACATCTTGGATGTGAAAGAGTATAGTGTGCGACACAAGCATTGGTCCGTACCAATACACATTTTATAAAATATATGGTACGCACCAACAATAACCTTGCTGCCTTTTCCCAAAGGTGGGCGGCAAAAATTGACTTAGGGAGGGATTTTGTATGGAGAAGGTATTAAGGAACGTCATAGGAGAAGAATGGGTATTGGAGCTCAAATTGAAGAAAGTGCAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCAATCGAACCGATACGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 279012-282019 **** Predicted by CRISPRDetect 2.4 *** >NC_016148.1 Thermovirga lienii DSM 17291, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 279012 30 100.0 37 .............................. ACTATGGCTTTGGCTCTTTTATTATAGCCATTATCTG 279079 30 100.0 36 .............................. ACTACATTGGCAATTTCTTTTGCTGACTTATTTTTA 279145 30 100.0 37 .............................. GGTTTTTCAACAACTGCAGCTTGGGGCTCTAAACCAA 279212 30 100.0 37 .............................. GGGGCTTTAGGCGCATCCTCCTGGCCCGTGTCACCGT 279279 30 100.0 36 .............................. TCGAACTGTTCCTCAAGCCCCCTTGTGCTGAGCCAC 279345 30 100.0 36 .............................. GAGCGGTGACGGTGCCAGCTAGCGGGACCACAGCCA 279411 30 100.0 35 .............................. TATGTCAGCGCCATATGTCGAGGATATGCATTTTG 279476 30 100.0 36 .............................. ACGACATAGATGCACTGCTTCAGGAGCTCTTCGATG 279542 30 100.0 35 .............................. ATGAAAATGACATAACCAGATACAAATGAAGGCGG 279607 30 100.0 36 .............................. TAGACTTCATGCGCGACGACTTCAGTCGTCTGCCCC 279673 30 100.0 36 .............................. TAGCAATAAGAGAAAGGAGTGAAAAACATGACTCTA 279739 30 100.0 37 .............................. ATGCCGTGCGGGCTGAGAGGTGTCGCCGTTCTTTCTA 279806 30 100.0 36 .............................. TTTGATGTGCGCTACCTGTTTTCCTCCCCAAAACAA 279872 30 100.0 36 .............................. TGATTTTGACGAGGCCATGCTTAACGTTCTTATCTT 279938 30 100.0 35 .............................. CTCCAGCGTCACGACGTGGTAACCGTTGGCGCATG 280003 30 100.0 36 .............................. ATTACTCCTATGGTCTAGAACAGAAGCTCGTACACA 280069 30 100.0 35 .............................. TCGACAACAACGCCTGGTACTGGAAGGGGCAGCTG 280134 30 100.0 37 .............................. AAGGGGCCAAAAGTACCAGTGCTAACAACGCGAAAGC 280201 30 100.0 37 .............................. TAAATATGCCCGCCGCACCCTCACCTGCTATGGCCAC 280268 30 100.0 36 .............................. ACGCATATTTTGCGGCAATAATACTGTCTGCGGATA 280334 30 100.0 37 .............................. CGCAATATGACCCACAAACCGACACAGTGTCTTTTAT 280401 30 100.0 36 .............................. TTGCAACAGAATCAGAGTTTTCGCTGTGGTCACATC 280467 30 100.0 38 .............................. TTCGTAGCGGATATCAAACTGGCTGAACCCCATAAGCC 280535 30 100.0 37 .............................. GTGGCGTTCGTATGGTTGGCCAAGAGCGGCAAGCTGA 280602 30 100.0 37 .............................. AGTTCCCGCCTCATTTCCAGTAGCTCCCGCACCGCCT 280669 30 100.0 35 .............................. CTGGCTAGACCTATAATCCTTGAGCATGACGGAAA 280734 30 100.0 35 .............................. CTGCTCCATCTCCCCATCGAGACGGGTTCTTCCAT 280799 30 100.0 36 .............................. TACATCCTCCTAAGTTTTTTGGTCGGCACGTACTTA 280865 30 100.0 35 .............................. ACAGTATGGTAACACCGCAAATCATAAGCATCATA 280930 30 100.0 36 .............................. CGGAAAAACAACCTTAGGTAGAATAGTCGCAAAATA 280996 30 93.3 35 ....................A........T AGTGTTTTTATGACCCGACCGATGCCGCGCAAGCA 281061 30 100.0 39 .............................. TCCAAACACACCTTCCAATCTAAATGTTCAATCTGAACC 281130 30 100.0 36 .............................. CCGCTCTATGGCGTCCGGCGGCCAACCGTGTTCATT 281196 30 100.0 35 .............................. ACCAGTTTCGCGTTTTTCTGCGCAATAGCCACCTC 281261 30 100.0 36 .............................. GTGCCCATGCTGCAGAGTGTGCCGGGGCTACTTCAG 281327 30 100.0 37 .............................. GTGCTTGAAGGAATTACGCCTGTTTACGCTTTTTCAA 281394 30 100.0 35 .............................. TTGTTATCTTTGTTACCTCTCTGCGCGTCCTCTTG 281459 30 100.0 37 .............................. TTTGTTTCCTTCGCGCAAAGGCCGTGGGCCTATAACG 281526 30 100.0 37 .............................. ACAAAAAGGAAAACCCCCTTTATGATCGGGCTAGACC 281593 30 100.0 37 .............................. TGTCGGCGCTTGGGATATCGGATTGCGGCAGCCTTGC 281660 30 100.0 37 .............................. ACCACCTCGCCCTCCCATGTGATTTTTTCCGGCATAG 281727 30 100.0 36 .............................. TCCAATTCAATTGCCGTGGCGAGTTCAGCCGACAAT 281793 30 100.0 35 .............................. CTGAAATAGTCTTTGACTGTGCCATTAACCACGGT 281858 30 100.0 36 .............................. TGTCGAGGATATGCATTTTCCGGGTAGCCCTCTGAC 281924 30 93.3 36 .....................AT....... CAAGCTGTCACAGAAGCAGTAGGTCAGTGCCTTATT 281990 30 96.7 0 ......................T....... | ========== ====== ====== ====== ============================== ======================================= ================== 46 30 99.6 36 GTTTTAGACCTTCCTATAAGGGATGGAAAC # Left flank : TGTACAAGGTAGAAAAGCATGTTCTAGGAGATAAGCTGTATGAGCCTTTTGTGGCAAGGTGGTAGGAATGTTTGTGATAATGGTGTACGACGTAGGGGAGAAGCGAGTCGCAAAAATGTTGAAAACTGGTAGAAAATATTTAAGCTGGGTTCAAAATTCTGTTTTAGAAGGGGAGCTTTCCCCAGGGCTTTTTGCAAAGCTAAAAGCCGATGTTTTGAAAGTGATGGACAAAGAGCAAGATAGTGTTATTTTCTATACTTGGAGGGTTGAGCGGTACTCCACTAGGGAAATATTAGGGGTTGAAAGGGGAGCTAGTGGTCCCTTTATCTAGTTGTGTCGACCTCCAATAGTGCTGAAAAACCTGGGGGTAGACAAAGGGGTTGAGCCTTGGATAAACGTTGTAGCTACTGGTTATGGCTCAAAAATAGGACCTTGAAAATAGAATAAATCTATGGAATATTATTGTAGAGAGAAACTAGAATACGGCTAGAAGAAAATGG # Right flank : CTGCGGCAGGTAGTTTTAAAAGTAGCTTAGAGATGTAAAATTTCTATTCATAAGATACGCTGACAGATCATGGGCTCTACAAAGTGCAATAAATAAGTATTCTCAGCAAAATAGGTGGAGATAGGGCCAGGTTTATTCAACAAATAGCAGAAGAAAACAAAATCTCATCAATTAGCTTGAAAAAGCTGGCTTAGTGGTGCGTTTTCGTCAGTATTCAATACGTGTCTTTTTTCCGTAAAAATACGCAGGCAGGCATCTACGACTTGAGGGTCGTACAGAGTAGTGTCCATTATGATGGTGTAAAATTGATGGCTTGAAGCAGGAGAGCCACCCCTCCCTCTGGTAGATAAGAAGTAGCTTAATCTTAATCATCAGGAGGGAGAAAAGATGGCTCACTACCAGGTTACCGTAGACTGTGATCTCTTGCAAGGATTATTTATTCGGGATGATGGATTGGCTCGGTTGGTGGAGAACATCGTGAATCAGATACTCGATGCTCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGACCTTCCTATAAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //