Array 1 325796-327084 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLXO01000023.1 Streptococcus uberis strain OLC4459-A11 k127_161, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 325796 36 100.0 30 .................................... CCACGTAGTGCAGTACCAGCTTTTTCGCCT 325862 36 100.0 30 .................................... ATTGCTGATCAGATGAAAGTTAGTAAGCAG 325928 36 100.0 30 .................................... TAACAACTGCAAAAGGTAAGAAAGACTTCA 325994 36 100.0 30 .................................... AGAGCCAAAAGCATTTGAAGTTCAGGAAGC 326060 36 100.0 30 .................................... AAGCAGATAAGTTAACGTTTACTTTCCATG 326126 36 100.0 30 .................................... CTTTCAAGCAGTACAGTTAGTTCACGTTCC 326192 36 100.0 30 .................................... ATTCCTTCTGGTCTCAATACAATTGAACCT 326258 36 100.0 30 .................................... CAGATGATTTAAAAGAGTTACGGCCACCTC 326324 36 100.0 30 .................................... TCCAGTAGTCAAGCTCAGCATTTCGGTCAG 326390 36 100.0 30 .................................... TGGGCATAAAATCGAAAATTACAGACTTTT 326456 36 100.0 30 .................................... ATTGGTACCGCAGTTAGTACAGTTGCAACT 326522 36 100.0 30 .................................... ATGAAGCAATTGCACGACTTTCATTATCGA 326588 36 100.0 30 .................................... TTAACCATTCCATAATAAACTTCATTTCGA 326654 36 100.0 30 .................................... TCAATATGTAACATCCTCCTAAGCTCTTCC 326720 36 100.0 30 .................................... CTGACTGTCAGAGCCTATACGAGAAGCCTC 326786 36 100.0 30 .................................... TGCTTATAGTCAATATGTGCGTAATCATCT 326852 36 100.0 30 .................................... TTTCCATTCTAACCCTATCAATACGTTTTC 326918 36 100.0 30 .................................... TTTTGACCATTTCCTTGCAGTTAGCAGCAT 326984 36 100.0 30 .................................... AAGATACCTTTGATAAAATTACTCGTTCGT 327050 35 91.7 0 ..................-...............TT | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACTATAAAAC # Left flank : TAAGAATTTGGATGATTATCTAAGTCATAAACAATTTATTGAGATATGTCAGTTTTTAAACGATATATGTCAAAAATATTCTCATTTTTTCTGTATTGTATTTCCTTCAAATGAAAGTTATTTATACGTAACAAAAGAGAATACGGAATATATTAATATTATCTCAAATCAAATTGAATCCTTTTACGAATTTGACTTTATGTACGAAAGATTTTGTCAATCTTATCCGACTAATGATTATCCAAACGAAGACCAATTCTTAAAATTATTACAAAGAAATGGAAGTTATTTATTTAGTGAAGAAATAGGCCATTTTAGTTTGTCTGTAAGAGATATGGTAACTATCAAAATTTTAAACATGCTTTATCATTTTAATGATAAAGTAACTTTTGAAATTCCACATGTGAATTCGATGGAAATCAAATACCTAATTAATAATGATTGACTTTAAATCAGCCTCGAATTATAATCAAAAAGAGAGTATAAAAATTTAATTTGAG # Right flank : TAGTATTCTTAAGTAGGTTTGGTAACTGTTGATTTTTAAATAATTCCATATAACACCAAGAAAACAGCCACTTTCTAGAGTGGCTGCTTTTTACTTACTTTTCTTATTTTTGCATGATTTCTTTGATTTTGTGTGACTTTATCCAATCTATTGTTTAAAATGTATAATTATTAATAAAATAGCCTTAAAAATGTATATCGAGAAATACGTTTTCAGGTTTTTTCTTGTTTTTTTGATGCTTTTAACCCTATTAAAATAGGCTTTTATAGTAATTAGATTTTTTAGTCAGTTTTTTCTTTGCAAACCCTTACATATGTGTTATAATGAGAAAAAATAAGAGGAGAGATTCCGATGGAAAAAACATTTTTTATGATTAAGCCTGATGGCGTTCGCCGTGGTTTGATTGGAGAAGTGCTTCAACGCATTGAAAGAAGAGGGTTTACTCTTGATGTTTTGCAGCTAGTTACTCCGAGTCGTGAGCATTTGGATGAGCATTATCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //