Array 1 71578-68489 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDKA01000012.1 Shewanella algae strain BrY contig_17_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 71577 28 100.0 32 ............................ CATCAGTCGGCGGCGACTCGCTGCTGAGCAAT 71517 28 100.0 32 ............................ TCCAAAACTCTGGCGACTGGCCTGGACATCAA 71457 28 100.0 32 ............................ AGAAATAAGTTGTGGGAGCTTGAAGGCTATTT 71397 28 100.0 32 ............................ TGTTCGATACATCATAAAAAAACTCATGGTGT 71337 28 100.0 32 ............................ TAAGAGAACTGAAACAGACGACAGTAACTGGA 71277 28 100.0 32 ............................ GCACTTGATGCCATGATTCTTGATGCAAGACT 71217 28 100.0 32 ............................ ACACCCAATTGCCGCAAACTTCAATGTTTAAG 71157 28 100.0 32 ............................ GATATCAAAAGCCAGCTGGCCGAGGCTGAAAA 71097 28 100.0 32 ............................ TATTCGGCAGTTAATTGCTGTACTAACGTAAA 71037 28 100.0 32 ............................ ATCAAACGCCATCTGAATACGGCGGCGGTAGC 70977 28 100.0 32 ............................ TCTGAGTAACTTGACTCAGACGACATATAAAA 70917 28 100.0 32 ............................ CTGAAATCTCGCCGGAATTGGCAGGAATGAGA 70857 28 100.0 32 ............................ GAACGGTAAAAAGCTGAGCGCCGGTGATCTGT 70797 28 100.0 32 ............................ TCAGCGCGATAATCTTGAAGCGATAAGTAACA 70737 28 100.0 32 ............................ TTAACTTGATTGCTTGATGGCCGAGTCAAGCT 70677 28 100.0 32 ............................ TAAGTGTAAACAGCGTTTCATTGCTCGCGGTA 70617 28 100.0 32 ............................ GATTAAAGTATCTGTCATGTGGTAACTTTCTG 70557 28 100.0 32 ............................ GCAAAGCCAACGCGGCAGCCAAGAAAGCAGCC 70497 28 100.0 32 ............................ GTTGGTTGTCAACACCTTGAACTCAATTACCC 70437 28 100.0 32 ............................ TTTTTCTGGCTCAAGGCCAAGGCCTGTGACAG 70377 28 100.0 32 ............................ AAGAACCCTAAGACGGTAAATTGCCACGTTTG 70317 28 100.0 32 ............................ TGATGATGGTAAAAACTCAGAAGTATTGTTGC 70257 28 100.0 32 ............................ TGGCTCGCCCAGGTGCCAGCCACGCCCCAGGC 70197 28 100.0 32 ............................ GGGTCAAGATAATGAGCAAATGTCTCATGCAC 70137 28 100.0 32 ............................ GTTACACTTTTCACAGAAACGCTCACAGACTG 70077 28 100.0 32 ............................ TCGAAGGTTGGGCTGTTTGAAATGGAGATGGT 70017 28 100.0 32 ............................ ACTACTAAAATCATCAATCCGTTCATGATTGT 69957 28 100.0 32 ............................ ATGAAAACAATCACTACCAACACCAAGACCAA 69897 28 100.0 32 ............................ AATACAACCGGCTACGCTGTCGGTGCCACTGA 69837 28 100.0 32 ............................ CATCTCGGGCGGGAGCGTTTAACTAATTACAA 69777 28 100.0 32 ............................ ATGACAGGCAAACTACAGCAGCACATGCAATA 69717 28 100.0 32 ............................ CAGCGCATAAGCACATGGCAGTGCGGGTTTAC 69657 28 100.0 32 ............................ GCCGAACGCCAGCGGGCTAGAGCGTGACATCG 69597 28 100.0 32 ............................ GCTGCATGATTGAGGATGCGCATGAAGAACAC 69537 28 100.0 32 ............................ AACCGCATTTTCTTATGTGCAAAAGCTTATTT 69477 28 100.0 32 ............................ AAGAACCCTAAGACGGTAAATTGCCACGTTTG 69417 28 100.0 32 ............................ TGATGATGGTAAAAACTCAGAAGTATTGTTGC 69357 28 100.0 33 ............................ AACTGACGAGCATATTCCACGGCAACAGCTTTT 69296 28 100.0 32 ............................ ACACGTTGGCAATGGTGGTGCCAAGGGCTTTT 69236 28 100.0 32 ............................ ATACATGGGCGTTACTGAATATTAGATAACAA 69176 28 100.0 32 ............................ TGCTGCAGCAGCAGATAGGTACCAGACTTAAC 69116 28 100.0 32 ............................ TGACAGCACGATAGCAACCGCTGCAGCGCAGG 69056 28 100.0 32 ............................ CCAAAAAAATCGGCGCTGATTGGGGCTTATGG 68996 28 100.0 32 ............................ AGGTGTGTGGCGTAGAGCATCCAGAAGGTGCT 68936 28 100.0 32 ............................ TGTATGGGGGTCTAAAGCGGTTCGGCTGGTTA 68876 28 100.0 32 ............................ ACGATCTAGTGCTTTGGAAAGCATCCCCGGAG 68816 28 100.0 32 ............................ TCACCCAGGAATTGTTTTAATGGCTCGCAAAC 68756 28 100.0 32 ............................ AGTTGAAGATTCATTTTGGTGCCGAGCAACAA 68696 28 100.0 32 ............................ TGTAGCCACTGGCAGCGATGGCGAATTTGTTT 68636 28 100.0 32 ............................ TGCAATCTGAACCTTATGGAAGATGACAGTCA 68576 28 100.0 32 ............................ CGTTATCGGGGTAGCGCGGGAGATCCGCGAGT 68516 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 52 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCTGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTGTATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAATATCCGAATTTCCTGCATTTATGGGGCTGAAGAGGCCGAAACAGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCACAGGCTGTAGGTGACACCCTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTCGCTAACCGCGACTCTTTGGCTACAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //