Array 1 1069165-1073769 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP067413.1 Raoultella ornithinolytica strain TET32 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1069165 29 100.0 32 ............................. GTAAATTCACGACAGGGGTCATTCAGTTGCTC 1069226 29 100.0 32 ............................. ATCTCACTAAACAGCTTGAAGCCCTGCGAAGA 1069287 29 100.0 32 ............................. GCTCTTTTCGACCAGCGACTTACCGGGCGAGA 1069348 29 100.0 32 ............................. GTTGTGCGCGCGTTGCAGTCGGCGATGCTCAT 1069409 29 100.0 32 ............................. AAAAAATCGGTCGTCGGCTATAAGTACAACAT 1069470 29 100.0 32 ............................. CAGGTGGGCCTGTCGCTCGACGAGTCGAAGTA 1069531 29 100.0 32 ............................. TTCGGACCGATACAGACCTTACGGGGTCTATC 1069592 29 100.0 32 ............................. CCACCATCACCGGACGTAAACGGGCGACCTCT 1069653 29 100.0 32 ............................. CCCAGCATCTTTTCGAGGTTCTTATCCATGGT 1069714 29 100.0 32 ............................. GCTCATAGTTTCATCCAGTTCGGCAATTGAAG 1069775 29 100.0 32 ............................. GCATTTCGGCAACAATGCTAACGCCGGTCGCA 1069836 29 100.0 32 ............................. TTTTGGTCGTGCATCCAATGCAATTGTTCGTG 1069897 29 96.6 32 ............................A CCTCGGGGCCATCGGTTAAATCCTCCCCTATC 1069958 29 100.0 32 ............................. ATATGGCTGGGCTGTACTGCGTCTTTGTTGAT 1070019 29 100.0 32 ............................. GCCGCCGCGCCCGATAGAGTCGATCTCCATTA 1070080 29 100.0 32 ............................. CGCGAAATTCCTGGTTATACTGCTTCTTCGAC 1070141 29 100.0 32 ............................. GCCATAGCTAAAATTGCTATAATGAATTGTGT 1070202 29 100.0 32 ............................. GCGTCTTCACCGCCGACGTCGGCGTGCCGCGG 1070263 29 100.0 32 ............................. GGGTATAATGTCAATGCGTGGATCGCAGACTT 1070324 29 100.0 32 ............................. CATAGGCCACCCAGCCATTATGGCGCCGATCC 1070385 29 100.0 32 ............................. AAATACAAAATATGGGTACATCTGGGGCATGA 1070446 29 100.0 33 ............................. ACATCATGGAAATCGTGCAGCGTATCGGGCCAC 1070508 29 100.0 32 ............................. GCGTAACCCCGACGAACCCGGCATGGTATCCG 1070569 29 100.0 32 ............................. CTGGAAACAGGAAACTTGTGTAAGTCGTATTC 1070630 29 100.0 32 ............................. AAATGAATATCGCCTACATGATGGAAATCATT 1070691 29 100.0 32 ............................. TCAACCTCTATTTCGAAAATGCTCACAGTTTT 1070752 29 100.0 32 ............................. TCAGAGCGCGAGAAGTTCATTAATGACTTTAA 1070813 29 100.0 32 ............................. CATTGACAGTTCCAATAAACTCGACACGCAGG 1070874 29 100.0 32 ............................. AAATCAATATCCGTTTACGCCTGGGTTAAGGC 1070935 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 1070996 29 100.0 32 ............................. CATTTGTCCAGTAACAACCCGTCTACCCATAC 1071057 29 100.0 32 ............................. ATCATCTCCATGCCGTACCAGGTTTTGCGGAG 1071118 29 100.0 32 ............................. ATGGATGTATGGGTGCTTTTCGGAATGATTCT 1071179 29 100.0 32 ............................. CCAGCCGGGAGAAGTTTGCAATCCAGTTGCCC 1071240 29 100.0 32 ............................. CTGGCATTAATAGTCACTGAGATGGTTTACAA 1071301 29 100.0 32 ............................. CTCTTTCGCTACCGCCGTGATTACCTCTTTTG 1071362 29 100.0 32 ............................. GTATTTTTAATGGGGGTATAGGATGGGTGTTT 1071423 29 100.0 32 ............................. CCATCGGACACAGGAGAGTTAAATCCGATAGC 1071484 29 100.0 32 ............................. CGATTGATGAAGTCGGTAACATGTTTATTACT 1071545 29 100.0 32 ............................. CCTGACTACCAAATGCATCTACCGCGGCGCCC 1071606 29 100.0 32 ............................. ATTATCTACAGCCAACTTACTACGAATAGAAT 1071667 29 100.0 32 ............................. ATAGCAACCATCGTTGGATGAAAACTGGCTGG 1071728 29 100.0 32 ............................. ACGGTGATCACCCTGACGTTTGTCATTTTTGC 1071789 29 100.0 32 ............................. GTACGCCGGGGCCGTGGATTGCAGATATCCGT 1071850 29 100.0 32 ............................. GCTAAAACAGGCGATCCCCCGGCACTGGAGGG 1071911 29 100.0 32 ............................. GTAGTGATGGCGGTGGCTCCGGTGGTGGTGCG 1071972 29 100.0 32 ............................. CGAGAGATCAGGCCAGGAAAATTACCTTCTCC 1072033 29 100.0 32 ............................. AACAGAACGTACTCCCACAGCGTTCTCAGTAG 1072094 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 1072155 29 100.0 32 ............................. CCTCTTGAAACTCAGGATAGTACGTTAATACA 1072216 29 100.0 32 ............................. ATAACGCTCAGGATATAATCGCTGCCTGATGT 1072277 29 100.0 32 ............................. GAGCGCGGGATCCTGACCTGGGGTTACGGCCA 1072338 29 100.0 32 ............................. TGTCGTTTAACGGGTACGAGTGGTCCGTTGTC 1072399 29 100.0 32 ............................. CGGGATCTGCGGTATCGCGTAACGCAATTTGC 1072460 29 100.0 32 ............................. TCGCCGACGCTACCGCTAACGCCGCGGCCGCC 1072521 29 100.0 32 ............................. CCAACAGAATCCGCAGACAAAATGATGTTTGA 1072582 29 100.0 32 ............................. GATGTGTACACGTCCATCCCTGGCTATGTGCT 1072643 29 100.0 32 ............................. GTCCTTGACGGCATTAATCACTCAGGGCTTGG 1072704 29 100.0 32 ............................. GTACCGTATCAGGGCGTTCGTCCGACGCGACC 1072765 29 100.0 32 ............................. ATACTCGCCGCAAATTTCAGCCAGTTTCCCGT 1072826 29 100.0 32 ............................. TCACTGTTTGTACTTTGACGTTACTTGCTCAA 1072887 29 100.0 32 ............................. GACGCCATGTGACAGTGGATGGTCGCCTCAAA 1072948 29 100.0 32 ............................. TTATAAACTGTAATATGCATGCGCAAGCAGGC 1073009 29 100.0 32 ............................. ACTGGAACGCACCAGTGCCTGGTCCAGCACCG 1073070 29 100.0 32 ............................. CAATATCAATTTCCCGCAGGATCAACGTCCCA 1073131 29 100.0 32 ............................. CTCATCTCCTTCAAACCATGCCAGCTTAACAT 1073192 29 100.0 32 ............................. CGGCTATTCACACGAAAGCAGCTACCGCACCT 1073253 29 100.0 32 ............................. GTAATCCCAGACTGCAATAACAGTGGGGTAGC 1073314 29 100.0 32 ............................. CGGCGCGTCTGAATGTTGATATTTTAACCATT 1073375 29 100.0 32 ............................. TGTCTGTTTAACTCTGTGGATAACCTGGAGGC 1073436 29 100.0 32 ............................. CCGTTGGTGTTTGTCCTCGGGCATATTGAAAT 1073497 29 100.0 32 ............................. CGGAGAAACCCCGGCATGGCGATATCGTCATT 1073558 29 100.0 32 ............................. CTTTCACGTTTGCTCATAGGGATTTTTTTTCC 1073619 29 100.0 32 ............................. TGCAGATATTTCCCTGATTTGGGGATCCAAGA 1073680 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 1073741 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================= ================== 76 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCTGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : GCAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAAGGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGTAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //