Array 1 65258-66131 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KQ001517.1 Pseudomonas aeruginosa strain HMSC05H02 Scaffold147, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	==============================	======================================	==================
     65258	    30	 100.0	    36	..............................	ACAAGTAGCGGCTCGTCGGTAGCCCAGTTCCCGCGT  	
     65324	    30	  96.7	    36	.......T......................	GCGCGATCGTCGCTGCGCTAGGCTGGTCTCGAAGGT  	
     65390	    30	 100.0	    35	..............................	TCCGTCAAGGAGCGATGGGTAGATTTCGATCACGT   	
     65455	    30	 100.0	    37	..............................	TGTGACTAAGTGGCTGCTCGTTGCAGTGGGTGTGCGT 	
     65522	    30	 100.0	    36	..............................	GCGCTCATGCGTGACAACGTACAGCAGCACAGCAGT  	
     65588	    30	 100.0	    35	..............................	CTTCGCGCTGGACGAGAACAACGCTCCTCTCTAGT   	
     65653	    30	 100.0	    36	..............................	CCTGGAGAGGCCAGCAGGCCGACATGATGATCGTGT  	
     65719	    30	 100.0	    36	..............................	ACCTGCTCGAGTTCGGCCTGGTGACTCTGACGTGGT  	
     65785	    30	 100.0	    35	..............................	AGCAACTATCGCAAGGCCCTGCCGCTGCAAGACGT   	
     65850	    30	 100.0	    22	..............................	NNNNNNNNNNNNNNNNNNNNGT                	Deletion [65902]
     65902	    30	 100.0	    37	..............................	ACGAACACGGTTATCACCGGCGACGGTAACAGCGTGT 	
     65969	    30	  96.7	    38	...............T..............	AGCCCCGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT	
     66037	    30	  90.0	    35	...........T................CA	ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT   	
     66102	    30	  83.3	     0	.......TA.G............G.....G	|                                     	
==========	======	======	======	==============================	======================================	==================
        14	    30	  97.6	    35	CGCGCCCCGCACGGGCGCGTGGATTGAAAC	                                      	       

# Left flank :   CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATCTACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCGGT
# Right flank :  GATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGTGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCTCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATTGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCT

# Questionable array : NO	 Score: 9.09
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CGCGCCCCGCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.80,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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