Array 1 80542-73551 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCAP01000011.1 Salinicola sp. MIT1003 NODE_1_length_446308_cov_93.1428_ID_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 80541 28 100.0 32 ............................ TGGAGATAGTTACTCAGATTGCCATACAGATC 80481 28 100.0 32 ............................ ACCGACACCCAACTGCAGGAGTGGACCGCATG 80421 28 100.0 32 ............................ GCCGAAACCAGCAACCTTGACTGGACCGAGGG 80361 28 100.0 32 ............................ CGATCGCGAGCGCGCCCTCCAGGTCACCGATA 80301 28 100.0 33 ............................ CTGGCTGGCGTCCGTGACCTGCTCGAGCGCGTC 80240 28 100.0 32 ............................ AAGATCAACGGCCAGCAGACACGGCTGACGCG 80180 28 100.0 32 ............................ AGTGGCGCCAGATCGTGACGATCGAGGATGCC 80120 28 100.0 32 ............................ TCGCGAGCATGTCTGTGGCGAGTTCGTCGAAA 80060 28 100.0 32 ............................ GTTGTGGCCATCGTGATAAGGAAGAGAAACCC 80000 28 100.0 32 ............................ TTCGGCTCGCTCACTCATACCGCACCTCCGCC 79940 28 100.0 32 ............................ GTACTCATCCGCCCAGTAGCCGGCGTTTTCGT 79880 28 100.0 32 ............................ ACCATCGGCAACCAGGCCGCGCCGGTCATCGT 79820 28 100.0 32 ............................ TGGAAGAACGCCCGCTCGCACCTGTACCGCAT 79760 28 100.0 32 ............................ CGGGGCCGGTTCGGGCCTCGACGCCGACAAGC 79700 28 100.0 32 ............................ TCGACGGACAAGGCCCAGGCGAGATACGGCAG 79640 28 100.0 32 ............................ GGCATCGCTCTGCGCGACGTAGTCGATCGCGA 79580 28 100.0 32 ............................ TGATCGGCGCCGCCCTGCCCGTGGGCGTGACC 79520 28 100.0 32 ............................ GCTGGGCTACGTGCGATCGAGGGCGTCAAGAC 79460 28 100.0 32 ............................ GAACGCTACGACGCGATAGCGACCGTCAAGGC 79400 28 100.0 32 ............................ CGCCAGCATTACCGCCAGCTACTGCATACCCC 79340 28 100.0 32 ............................ AACTGGACGTCGACGCCCCAGCGTGCCTTCTG 79280 28 100.0 32 ............................ AGACCAGCACCTCGTATTTCCTCAATATGTAA 79220 28 100.0 32 ............................ AGTACGGCACCACGTTCGATAGCTCGCTGGCC 79160 28 100.0 32 ............................ ATGGCAAACAGCGACCAGCCAGCGGCGAAGTA 79100 28 100.0 32 ............................ GCCGCGATGGCCTGGCAGCAACGCTGCGCAGT 79040 28 100.0 32 ............................ TCTTCCGGTTGCCGTGTCATACCCTATGTAGC 78980 28 96.4 32 ..T......................... CCGGACATGTCGCACAACCAGCACTCGTCGCG 78920 28 96.4 32 ..T......................... AGAGGCTCTAAACCCGTTTCCGCGCTACGCGC 78860 28 96.4 32 ..T......................... GTGATGAGAATGCCAAAGCTCGATGAGGTCAG 78800 28 96.4 32 ..T......................... AGTCTCAACCGGCAGTTATCCGACTACCAGAT 78740 28 96.4 32 ..T......................... ATTGGGCGAGCGGTACCCAGGCGTTGGATAGC 78680 28 96.4 32 ..T......................... TCAAGGACGCGACGGCGCTGACGGGGGAGCAG 78620 28 96.4 32 ..T......................... TTTAACCTTGCCCTGCCCCCGCTTGCTGAGCA 78560 28 96.4 32 ..T......................... ATCCATCTGCGGCTGGCCTTCCACCTTCAACC 78500 28 100.0 32 ............................ ATCTCGATCGGCGTGCCGAAGTAAGGCTTCGA 78440 28 100.0 32 ............................ TACCGGCGGGGCATCACCCACCGCAGACAGCG 78380 28 100.0 32 ............................ ATACCATCGTGCGATTACTTCCCTCGCGACTC 78320 28 100.0 32 ............................ ATTGTGGTCCCTTCCATATAAATACACCGTGA 78260 28 100.0 32 ............................ CAGTTCAGCAGAGCCATAGGCTCTAACCCCGT 78200 28 100.0 32 ............................ TGATTTTCATAAAATCCCCAAATTCTGATGTA 78140 28 100.0 32 ............................ AGAAACGTTTCGTCGGGCCGCCAACCTTGCAC 78080 28 100.0 32 ............................ TCGAAACCAACGCGCGGTTACGCTCTCCGCGA 78020 28 100.0 32 ............................ GCCGATCGCCTGCGCCGGCTCAATGCGATTGC 77960 28 100.0 32 ............................ ACGCCGATCGCATAGTCACGGATGTTGCCCGA 77900 28 100.0 33 ............................ ATGTTAATACCGGCGCTTGTAAGTTATATCAAT 77839 28 100.0 32 ............................ CGTGAGGTGCGCCGTTTCATGCGCGACTATGT 77779 28 100.0 32 ............................ AGTTATTAGCCAATATATTGCTCAGCTTAGCC 77719 28 100.0 32 ............................ ACCTCACGACCCGGCCGGCGCCGTGGGCAGCT 77659 28 100.0 32 ............................ ATGAAGCCCTGACAGCCTTCGGCGCCCTGTTC 77599 28 100.0 32 ............................ TGATCGATACCTTCACCAACGAAGATGGCGCA 77539 28 100.0 32 ............................ CGACACCGCGTGCCATCGGTCGTGATGCACGG 77479 28 100.0 32 ............................ TGGACGAGAAACCGAGAGTGGTCGGTCTGATC 77419 28 100.0 32 ............................ TTTGCTGCCCGACGCTGGCAGAGATACACGTC 77359 28 100.0 32 ............................ TCGAGCGCCATGACCGTACGAGCGCGTAGCTC 77299 28 100.0 32 ............................ AAGTCGGGCGATGGCACGCCGTCACACGAGGT 77239 28 100.0 32 ............................ GGCGTCTTCTCCTGCGCCTGCCGCTGATCCTG 77179 28 100.0 32 ............................ CGGCTGATGGCGCAAAACGCCGAGCTGCTCAA 77119 28 100.0 33 ............................ CTTGTTCTTCGGCGCATACTTCTCGCCAGCCTT 77058 28 100.0 32 ............................ AACAACGTCGACGCGCTGCGCGATCTCGTCGA 76998 28 100.0 32 ............................ TTGGCGGGCGCCTTGGCCTGGGGTTTGGGATT 76938 28 100.0 32 ............................ TCAATAGTAGATCTGCGGTCGAGAGCCGACTC 76878 28 100.0 32 ............................ GCGCGCACCGACGAGCAGTGGGACAGCGGCTG 76818 28 100.0 33 ............................ CAGTAGGGATCGATGAGATCGCGAGAGTGATCC 76757 28 100.0 32 ............................ TGCCTTGCAGCGAGAACAGCCGCGCCTACTGC 76697 28 100.0 32 ............................ GGATGACGCATAGAGAGAGCCACGGGGAGAGC 76637 28 100.0 32 ............................ ATGACAATAAATCCTGCCCCATTTGCGGGAGA 76577 28 100.0 32 ............................ AACAAAAAAGGAGCCCCGAAGAGCATTATTAT 76517 28 100.0 32 ............................ AGCAAACGATCCTCAGCAGATCCAAAAGACAA 76457 28 100.0 32 ............................ GTCGCGCTGGGGGCGTGCTGATAACGTGTTCG 76397 28 100.0 32 ............................ AAAGCGATCATGGACTTTGCGCGACTCCTGCA 76337 28 100.0 32 ............................ TGTCATATCGTCGATGCCAGGTGTTGTCCGTA 76277 28 100.0 32 ............................ ACCACGCAATAGGCCGTAACAGATGCCCAAAT 76217 28 100.0 33 ............................ AACAAAAAAGGAGCCCCGAAGAGCGTTATTATT 76156 28 100.0 32 ............................ CTCGAGACCTGCAGCCGGGGCGGCATTAACCG 76096 28 100.0 32 ............................ TGAGCGGCCAGACGATCCGCTTCCTGCTGCTC 76036 28 100.0 32 ............................ GGACGACTGGGAGCGAGTCAGCGCGAAGATTC 75976 28 100.0 32 ............................ GGACGACTGGGAGCGAGTCAGCGCGAAGATTC 75916 28 100.0 32 ............................ GGACGACTGGGAGCGAGTCAGCGCGAAGATTC 75856 28 100.0 32 ............................ AATCAGAAAAAACTACCCGCCTGGTTTGTTCA 75796 28 100.0 32 ............................ AACATAACAATATGTTTTACCGCCGGTTGTAA 75736 28 100.0 32 ............................ CTCGGAGATAGTCTCGCCAGACGCCGGATCGA 75676 28 96.4 32 ...................A........ ATAATCAAAATTAACAGGATCAGACCTTGAAC 75616 28 100.0 32 ............................ TGAGCAATTCCCCATGACATTTGCAACACCCA 75556 28 100.0 32 ............................ AAACCATACGTAAGGACTTGCCCGCCCCCGGC 75496 28 100.0 32 ............................ AGCGCGTCAAACTGCAGGTTCAGTCGATCAGC 75436 28 100.0 32 ............................ AGATCGAGATCGACAAGGAGCGTGGCCGGCTG 75376 28 100.0 32 ............................ GAGCAGCTCGAGATCGGCGGCACTTACGTGAT 75316 28 96.4 32 ....................T....... AGCGCGTCAAACTGCAGGTTCAGTCGATCAGC 75256 28 100.0 32 ............................ AATCGATAAAGTTGGCTGGCTAACTCTAACTA 75196 28 100.0 32 ............................ AGGCAGACGGCAATCGACCAGCTCGATCAGTT 75136 28 100.0 32 ............................ AGATCGAGATCGACAAGGAGCGTGGCCGGCTG 75076 28 100.0 32 ............................ GAGCAGCTCGAGATCGGCGGCACTTACGTGAT 75016 28 100.0 32 ............................ AGCCAGTAGATCTGCGCGCGGCGGATCTGTTG 74956 28 100.0 32 ............................ TTGCACCTGGTGAGCGATGTCGGTCAGCATCG 74896 28 100.0 32 ............................ CATCTCCGAAACACGGCCTCCCGCTGCCCTTT 74836 28 100.0 32 ............................ GCGCCCCGCGCCCTGCCCCATAACGTCGACGA 74776 28 100.0 32 ............................ GTCCCGCTGGGAGCCCGTGCATGAGCTCGCCC 74716 28 100.0 32 ............................ AGTCTGATCGAGCGCTATGCCGACTACGACGC 74656 28 100.0 32 ............................ ATGTTCCCTGCACCTCGCTATATCGAACATCG 74596 28 100.0 32 ............................ ACAGCACGCCGAAGATCACAGTGCCGGCCAGG 74536 28 100.0 32 ............................ ATCAAGCGGAACCTGGAGCGTTATGGATATCT 74476 28 100.0 32 ............................ TAACAAGGCTAAGCTCACCTTTTTTAACTATT 74416 28 100.0 32 ............................ TGGCTGATTCGTGAGCGACCCCAGATCAGGCG 74356 28 100.0 32 ............................ GCCGATACGGCCAGGTGATCTCCCCGTGGTGA 74296 28 100.0 32 ............................ TGGCGAATCCACTGCGCAGGCACAACATGATG 74236 28 100.0 32 ............................ TCGTAGCGCCGTCGACCTGCCTCCCGATCTTT 74176 28 100.0 32 ............................ TTGATGCGTTCATGCCATATGGTTTCGCAGGT 74116 28 100.0 32 ............................ TGATGGACACGCAGTACGGGGTCAACGGCTAC 74056 28 100.0 32 ............................ GCGATAGCTGGGCGGCGCAGATCAAGGATGCC 73996 28 100.0 32 ............................ TTTTCGAGCGTGCGCTTGGTGGCCTCGCAGCG 73936 28 100.0 32 ............................ TGCTTGCTGAGAACGAACGCCCGCGCTTCCAG 73876 28 100.0 32 ............................ ACGCTTCCCACGCGCACTGAACGTGATAAAGC 73816 28 100.0 32 ............................ TGTAATGTGCCTCGCAGTAATGCAGATCAGGC 73756 28 100.0 32 ............................ ATCTACGCCGCTGCCGACGGCAACCTGCAGGC 73696 28 100.0 32 ............................ GGACTATCGCGGGCGAACGCCGGTCGGCACCG 73636 28 100.0 31 ............................ GGTTAATCCCCACGTTTGCGGGGAACGGATC 73577 27 75.0 0 ..AT........A....T..T...-.T. | ========== ====== ====== ====== ============================ ================================= ================== 117 28 99.5 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : ACGGCTGGAGCAACTGATGGCGATGCCGTGGCTCGCCGGTATGCGGGATCATGTACAGCTAGAAGCCGTTCAGCCGGTGCCCGCCGAGGTGAGCTATCGGATCGTCCGGCGCAGGCAGTTCAATACGGGCAGCCCAAGCCGGGCAAAACGCTATGCCAAGCGCCATGGCATCGAGTTCGACGAAGCGCAACGCCTGATGGAGAAGCCCGCCGAACGGCAAATCGCCTTGCCCTTCGTACAAGTCAGTAGCCGATCCAGTGGCCAGCGTTTTGCGCTGTTCATCGAACACGGCGAGACGCAGTCGCAGCCCACTGCCGGTAGCTTCAATCACTACGGCTTGAGCTCGGAAGCCACAGTGCCCTGGTTTTGACCCTTTTTTATAGAATAAATATGGGTCTTTAAAAATCAATCATTTAGCGGCATTGCTCGAAAAAGGGGAATGTCGCTTTTTTTCATCCAAAGCTCTTTAACAATCAGGACGTTATTTGTAGTAATCTCTA # Right flank : GCATGGCAGGGGGTATGGCGGGCAGTTGGTGCCCATCAATCCCGCTGATACTCGACTTTGTGCCAATTTATTAGCCACCTAATTAGTTGGCCTCCATAATCTCGTCATCGGTTAGGCCAAGGGGCCTGCCACGCAAACGCAGATATTGGAGTGTCATCATGAAAACTCGCATTCTCGCCGCTATCGCACTGGTCGTTGCACTGCCTGCCGCCGCTCAGGCCAACAGCGTCATGGAAGAGCGCGCATTCGCCCAACAGCACGAAGCGCTGAATACCCAGACGACTTCCGGCTATCAGTTGCTGCCGACCGACTATCGCATCGATACCGTCAGCGGTGGTCATAGCACCGCAGCCGACCATTCACTGGCCTATGTCGCGGCAGTCACGCAGCGAGCAACCGATATCGCTGGCGGCAACGTTGGGCTCGTCGGCCAGGGTCAGAGCGTGGCCGCGGCGCAGGCGCTGCAGAACGTGAACGGTGGCGCCGATGCCGGCCAGGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //