Array 1 111533-112914 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 111533 30 100.0 38 .............................. CGAACCACCTCCACAGCTAGAAATGCCGACAATAATGA 111601 30 100.0 37 .............................. GCCAAATCGCTTTCCAATTGGCTGCGTTTCGATTTCA 111668 30 100.0 37 .............................. TATGAAGTCTCCCCGGTTGTTTTTATCAATGTATTAG 111735 30 100.0 39 .............................. AACGGACAGCAAGGTTCAAGATAAAAGACAAAGGCGACA 111804 30 100.0 37 .............................. TACAGATACGAAAACCCACCAAAAGGGGTGCCATTCA 111871 30 100.0 36 .............................. TGATCCATCGCCGATATTGGTAATACAGCCAACTGT 111937 30 100.0 37 .............................. ATAACTGAATCAGGATATCTGATGCTCGTAAAATCTT 112004 30 100.0 38 .............................. ATTGCTTAATAAGCGATTCTGATAAACGCTGGCCGTCC 112072 30 100.0 38 .............................. TTTCCGATTCCATGTGCCGTAGTATCCGCCAAATGCGC 112140 30 100.0 36 .............................. GAGAAATTAGAACGGACAGTGCAAGCGGTGGAGGAA 112206 30 100.0 38 .............................. TATGAGGTGGCAGGCTATGAGAAAAGACTTGATTGATA 112274 30 100.0 36 .............................. CTGGGATCAAGATAAAAGACGGTATCCCGCATTACA 112340 30 100.0 38 .............................. AAAGAAGTTGAACTTCTGACTAAGTTAGATGATTCTAT 112408 30 100.0 38 .............................. AAATATACTCTTTTCCATCTGAAACAACAATATTGTCG 112476 30 100.0 38 .............................. CAGCATCTTTTGCCGCCATACGGCGTAGAATATCATAT 112544 30 100.0 37 .............................. CGAACGGAGAAACCAAGACTTCAAGCGCGGAACTAAT 112611 30 100.0 38 .............................. GTAGGTTTCTCGATTTTTTGCTCTGTATTTTCGCTACA 112679 30 100.0 39 .............................. TACTTGCTCCAGCGGAAACCGTTCGCTTTTAATTCGTTG 112748 30 100.0 41 .............................. GGCGATCGTTCATATAGGGCCCCATCAATCATAAATCGAAT 112819 30 96.7 36 .................A............ GCGTCTTTTGCAGCAGTGACTCTCACATTGGTTGCG 112885 30 90.0 0 .........C..........A.G....... | ========== ====== ====== ====== ============================== ========================================= ================== 21 30 99.4 38 GTTTGTATCTTACCTATGAGGAATTGAAAC # Left flank : TCGTAGCGATTTGGCAGTTTACGAATATATGGAATGAATTTTTATTTGCCGTCACGATCACGACATCTTCCCAGCAGCCAATTATGGTCGCGCTGCAAAACTTATCGGGCAGCCAAATTGTGCAATGGAACGTGCAAATGGCAGGAGCGCTGCTAGCGGCGCTGCCGACTTTGCTTGTATACATTTTTCTTGGCAAATACTTCGTTCGCGGTTTATTGGCTGGTTCGGTAAAAGGATAATCACGCATGCCAGCAAAAGCATAAGAAAAATGTTTGTCGGAGAAAATCCTTCCACTTCTTTTAAGAGCTGAAGGGGCTATACAGGCGATCCGTTTGTCGTCGACCTCCAATCGTGCAAAAATCCCAGGGGATCGACGACAAATTCTTTTTTCCCTTTATCCTTACGGCCATCATCAATCCACTCTATTGACAGAATTTTCAAAATGGCTTATACTGAATTTAGCCTTCTTGGAACATATTGATTTATCAATATTTTTTGGG # Right flank : CAAACTTTGTCTATCCGCTTTTTTCTGCCACATTTAATGGGTTTAAAAAAACAAACCGCTGATTTTCAGCGGTTTGTTTGTTGATAAAGGTGTTTTAGCTAAGATTTTGCTGCTTTTATTGAGGTTGATCCTAATATTTTTTCTTCCATAGGTAAATGCAAAACAATGTTAACAGGGGATAAGAGAGTCCCCATGATTCAACACGATCCGGAAAATTCCGCTAAGAGGCTGCGGTTTGCATTTTTTATTCTCCGGTAATCTTAACATCGCTGGCGTCTCTCTGCTCTTTGCTTTGGAAGGCTTGACGAAATCTTCAGCAAAATGATTGCAGGGCATTCCTCGCCTTTGTTTTTTTGCTGTTTGAAGGCTTGTGCGGTATAGTTTTCTTTACACAATAAATGATTTGCTGCGATTGCTGCGATAAGCACTGCCCGGATGATCTTCTGGCAATAAGCTGCTGCCGTAATTAAATAACTTTTCTCGTAACGTTCCCGGTTTGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 457150-455455 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 457149 30 100.0 35 .............................. TGTCCAGCGTATCGCATTCGAAGCAAGCCAAGTAT 457084 30 100.0 35 .............................. CAATGCCGAAACAATTGCATATCGACACCGATTTG 457019 30 100.0 36 .............................. TTTCTGTCCTCGGTTCTTGGTCATGACTCCAAAACT 456953 30 100.0 38 .............................. TCATTTGCGCGCCCCTCCGCGACCCCCCTTGTTCCACT 456885 30 100.0 37 .............................. TGCAAAAAGCATCGGGAAATAATTTGTGAACATGTGC 456818 30 100.0 37 .............................. CCCATTCTACCTCACCCTTCCTTAACGATATAGTTGT 456751 30 100.0 36 .............................. CAGCGTAGACTTTTTCCATGTCTTTTACAATGACGC 456685 30 100.0 38 .............................. CAGGAAAGCCTTAGTGACACTTTAACTTTTACGTTGAG 456617 30 100.0 36 .............................. AGACGATGGATGAGAATAACGACAATGTCGGGGCAT 456551 30 100.0 37 .............................. GCGGAGGATAAGAAGGAGCTTTTGCAAAAATATGCGG 456484 30 100.0 35 .............................. ACTTTCACCTCCCAATAAAATAAGCGTCAGACGAA 456419 30 100.0 37 .............................. AGGTCGTTGTCGGCAACGATTCGCTCAATCGCTTTTT 456352 30 100.0 35 .............................. CCAAGAAGTTCAGTGCCTAGCAAAAAAGCAACTCT 456287 30 100.0 36 .............................. GATGAGTTCGCACAGTACGTACTCGCCGGCACGGGC 456221 30 100.0 36 .............................. TACCTCAAATGAGTTTCTATAACAGCAAATGCATTA 456155 30 100.0 35 .............................. ACTCCTTCTCGATACAGTCCAGCACAGGTTTTCCA 456090 30 100.0 35 .............................. TCCGTCTTTGTACTTCGGCTTCCAGCGCTTCTAAT 456025 30 100.0 35 .............................. CAGGGTGCGCTGGCGGAAACAGCCCGAAAGTGAGC 455960 30 100.0 36 .............................. ACAGAAGAAGAATTTGAAGCAAAGAAAAAACAATTG 455894 30 100.0 39 .............................. TGACAATTTCTTTAGCACGGTGACAGTGCCGGGCGCAAC 455825 30 100.0 37 .............................. ATAACTATTTCCGCGTCAAACAAATGACTCCGATGGA 455758 30 100.0 38 .............................. CTTCTTGCAAAATCATGTTTGAAGAATAGATAAGCGTG 455690 30 100.0 38 .............................. ATGAAGGCCCGGGTGGCTGGTAATCTGAAAAAGTGGCA 455622 30 100.0 37 .............................. CTATGTGCATAGAACATGTGAGGATCGTATTCTGACA 455555 29 86.7 41 .....C................-.AA.... CTAAGAGATCGTTCTCTTCTCTTATCTCTTAGGTTTTTATC 455485 30 76.7 0 ......GC...CG....G.AA......... | T [455470] ========== ====== ====== ====== ============================== ========================================= ================== 26 30 98.6 37 GTTTGTATCTTACCTATAAGGAATTGAAAC # Left flank : AGTAAAAACGGCCTGCCGAGCTTGACAGTGGTTCCGTGGGAATCAAGCTGCCCGTCAATTGCTTCGAATGGAACGCGCAAAAATTGATATCCCGCTTCATCGGCAATTTTATAATCAAATGAACCATGATCATAATCCCAATTTCCGCCAATGGTATAACCAAGCGGTTTTAACAATTGCTCCAATTGAAATAGAGGAAACGTTTTCCCTTCCAACTGTGACGGAATTTCGATCATCGCAAACAACCTCCTTTTTCACCTATGTTTCCCTATTCGCGCTCTTTATATGATTGTTATGGAATATTGCCTGCTACATAATGCCCCCACGCTGTCAATGTCGTCGACCTGGAATAGTGCAGAAAACCCAAGGGATCGACGACATTTCCTTTTGCTGCTTTTCCCAACTTCCATCAACACCGCCGCATATTGACGAAATTTTCAAAACCAACTATACTAAACATAGCTGATCTCGAAAAAGCTGATATACCAACGCTTTTTGGG # Right flank : ACTTACTCCGGCTGCCTTCCGATACGCAATTCAGTTTGTATCTTATTATGAGGAGCAAAACAGGTGTGCAGCTGCATTGTTGCTACCTTTGCTGCCACGTTTATATTGCAAAACTTAAAACCTCGGTGAATCTTGTTTTTTATGGAGCAAGCCATTCTTATTGCATATTACCGTGGGTGTCAGCGAAAATTTGCTACGATAAGCAGCGAAACACAGATGCCTGAGACAAAAACACAGCAAAATTACTTTTTTACAAATAAGATAAAAATCCCTTCCCGCAGCGGAAGGGATTTTTTGATAAGCAACCGGTGGCAAGTAATATCTTCGCATGCAAAAAACGGAGGGCATGATGCACTCCGAAAATCCGTTCTGTTATTTCAAGCGTTTTTCCAGTTCCGCTTTTTTCTCTTCGTATCCCGGTTTGCCAAGGAGAGCAAACATATTGACTTTGTATGTTTCAATTGCATTAAATTTTTATTAAGTTTATCAACTGTTGATTT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 465147-464651 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 465146 30 100.0 36 .............................. TATTGCAGAACTGCTAGGTATATCAGAAGGATCTGT 465080 30 100.0 36 .............................. TACAACGTTGATATTTCGGTTTTTTTTCCTGAAAAA 465014 30 100.0 36 .............................. ATTTTTTTAGATACACAAGTTGCCTTGGCACGCTAT 464948 30 100.0 36 .............................. CGGATAGTAAAAAACAGTTGTTGGAAGAAAGAAAAA 464882 30 100.0 37 .............................. CGGATTGCCGCACGTATGGTAGGGACGGTGTATTCAT 464815 30 100.0 38 .............................. CAGCCTTTTCAATAATTTCCTGATATGTTCCCTCCTTC 464747 30 96.7 37 ....................A......... TCCGCGCCTTGTTCGATCTCTCCTGAATCCCGTAAGT 464680 30 96.7 0 .................A............ | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 99.2 37 GTTTGTATCTTACCTATGAGGAATTGAAAC # Left flank : TAACAGGATATCTCGAATCCGCACAGCAATTTGAAGTGTCACATTTTTTTCCTGCAACCCATTTCCAATTGCTCCGGGATCTGCTCCGCCATGTCCTGGATCAATAAAGATTTTTACCATTTCTCCTCACCTCCATAAATAATTTATGTTTTTTCGCTGGACGTGCCTGTATAAAAAGCCTTGTGCATTTGAATCACCACTGTAAAAAAGAAAAAGCCACCTACCTAACAGGCAACTTATTTCCGTTCGTGGCATGCCCTCTCGCGAAATAAATATAGGAAAGGGGATTTTTGCACATTCTTTCCTAAAACATTGCATTCCTAAATATAATAAATGCCGTCGACCTCCGATCATGCGGAAAACTCAAGGGATCGACGACAGTTCTTATTCCCTTTTTCCTTAGGAATCTTCATCATCCCCATATATTGACACAATTTTCTTAATAGCGTATACTTTATGTAACATTTCAGAAAAATGCCGATATATCAATATTTTTTTGG # Right flank : CGATTCACCCGATCAACAAGAGTTTTAGAACCAAAATCATTTGTATCTCCCTATAAGGAATTAACCCTCTCTGTCTGCTGCCTGACTGGCCTTTGAAGTTTTTGAACGAAATTTGCTAGTGATAAAAAATCGATAAAGCCGACACAAGTTGGTTTATATTATAAAGGCAAAATGATAAACAAGGTTTCGCTCATGTTAGTTCACTTGTCTTATGGCTCTTACCGGAATCAGCTGGCTAGGCAATTAGGAACCGGTATTGCTGCGGCCTGGTTAGGAGCTAGTGTTGGCTGGTTACTTACGATAGTAAGGAGGATATAGATGTATAAAAGTGGCTTTAAAACATTCTGGGCAGAAAAGTCACCATTTTTGCTCGAGGAACTTTTCAGCAACTCACTTTTCTAATTATCTTTTCCCCTCTTTTCACAAGCATGTTTAAGGAAAAAGTTTTGCTTTTGCCATCTCTGTTTTATTATTACAATCATTAATTTAGGTGTGGAGTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 1293616-1295017 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1293616 29 100.0 35 ............................. AAGTTACTCATGATTGCAGTTGGGAACGTGATTGT 1293680 29 100.0 34 ............................. TGAAATGCTTATACAGAGACATCGCCTCAATCAA 1293743 29 100.0 35 ............................. TGGGATTGGTATTTTGAGGTAACCCGTGAAACGGC 1293807 29 100.0 35 ............................. GTGACTGAGACAGATGTGCCGGACATTTCCGAAGT 1293871 29 100.0 36 ............................. AATCCAGAGACGGGATTGGATTTGACACCGTTGACT 1293936 29 100.0 35 ............................. ATGCACAATGTGCCTGTGCTAGACAGTTCGAAAAT 1294000 29 100.0 37 ............................. TTCTTCGCGATGTTGACGGCGAGAAAACAAAAGAAGC 1294066 29 100.0 35 ............................. GCATGGAAGGAAGCAAAAGCAGTTGTCGCGAATGA 1294130 29 100.0 38 ............................. ACGAAGCCGGGTTTTGGAAAAGTTGTTTTGGACACGGC 1294197 29 100.0 35 ............................. AGAATATTGCATTATCCAGGTAGCAAATGGAGCAT 1294261 29 100.0 37 ............................. GTAAATGGAAGAGAATTTGAGAAATTTATTTTTACAA 1294327 29 100.0 36 ............................. TCACAAAAAGACTACGGCATATTACGCAGAATCACG 1294392 29 100.0 35 ............................. ATCGCTTCTTCAACATCTTTGGTATACCATCCGGT 1294456 29 100.0 36 ............................. TACAAACGTATAATTTCGGTCCATATTTTGCTGTAT 1294521 29 100.0 35 ............................. GGGATAACAAACTAACAAAGGAGGAAGAAAAATGC 1294585 29 100.0 38 ............................. TTTACTTTATTGAAATTCATTATGAAGAGTTTGAGGAA 1294652 29 100.0 40 ............................. TATTGTTCTCCTGCTAATTCTTTCAATCCATGTTCATATC 1294721 29 100.0 40 ............................. TTGCATGTAAAAAGTGCGGATCAGAATCCATGCCGGAACG 1294790 29 100.0 37 ............................. AACAATCATGCACAACGACAAAATGCCGACGGGGACA 1294856 29 100.0 36 ............................. GGACTTTCTGTGCTTGGAGTAGTGGCCACATTGGTT 1294921 29 100.0 39 ............................. TGATATTTCCCCATACTGACTTCACTAATGTAACTAAAA 1294989 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 22 29 100.0 36 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : GATACAAACCGTTGAAAGCGTGGTGGTAGAATGTATGTCATTATCACATACGATGTGGGAGAAAAACGAGTAAATAAAGTATGTAAGAAACTTAAGGAATATTTAACATGGACGCAGAACAGCGTCTTTGAAGGAGAAATATCAAAAAGTTTATTAATGAAATGCATGCATGAACTTGAATTCATTATAAATAAACAAGAAGATTCGATTTATCTTTATCAAGTGTCCAACCCAAAAAATATAAAAAAGCAAATTTTGGGGCAGGAACGGAATTTTGATGATCTATTTATTTAACGGTATAGAGCAGTTAACATGTTGCAGTAAACCTCGGTTTTATCTCAATATTGAAAAATACTTGATATATCAAATAAAAACCACTTAATTTTTAACTAAAGAAAAAACACAATTGCCGCTTTACTGCAAAAACCTATATATTGATGTAATCAAGGTTTGAAGAAAAACATTGATACATCAATATTTTGCCGTTGTTTGAAAATAGG # Right flank : GTTATCTTTCAGAACAACAAAAAAGAGCATTCCTGTTAGAAGTTTTTGGGGACTTGAATAAAAAAGCACTCTTGGTATGATTCGGTGGTGTTATTGGAAAGTTGGGGCCTAATTGGGTACCAAGGTATGCATGAATTCTATCTCAAACAAGAAGATGAATCAAGTCATCGATCAAGCGGTAGTTGTTGTGTCATGGATATCAACGCAAAAAATCATTTTGCATTTGTCAAGCGAGGATACTCATTTTCCGGCGTATCCGAAGAAAACAGATGAAACGTCAGCGTTCCAGTTTATCAACGTATAGCAAATGGAGAATCGAATGGCGCAAAGCTCGCCCTAACCGTACTTTAATCGTTATTTCGCACCGAATTGCATCACTTGATTGGTTAGAGCGCTACCTAGTGATAGAACATGGAAAAATTGTCGAGACAACTAGCTATGAGGAGATGATAAATAAAATCGAGAAGGCTGAACGGGCAGGGGAGAAAGGAGAGGAGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 5 1729999-1729163 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1729998 30 96.7 38 .............................G CTGACCATATGACATCAAATAGTTTGCCGAATGCATCT 1729930 30 96.7 38 .............................G GAAGAACTACGAAATGAATGGTATCAGGTCAACTCAGA 1729862 30 96.7 38 .............................G AAGCTCAATGCAGCTGCCAACCCGCGTGAAGTGTATTT 1729794 30 96.7 38 .............................G GCGAAATATGGTAATGAGATTTTTGTCGACAAGACCAC 1729726 30 96.7 37 .............................G CTGTTGTTCTCCAAAAACCGTTCGCCCATATACTTCA 1729659 30 100.0 37 .............................. TTCACTCCATTGGCACCCATCGATAGGGGAGGGGAGG 1729592 30 100.0 35 .............................. ATACAGGTCAGCTATTGTTTACCTATCCCGATCCA 1729527 30 100.0 36 .............................. TCACGAAAAACCAAAACGCCAAGATAAGGCAAACTA 1729461 30 100.0 39 .............................. ATGTCCGGCAAAATGCGTTGTGCTCTTGTGTTTGCTGGA 1729392 30 100.0 35 .............................. CGAGCTTGAAGTCGAAGAAGAAAATGAAAAAATAA 1729327 30 96.7 36 .............................C CGAGGATTGAAACAAGATTTTTCGTTATTGCAATCC 1729261 30 96.7 39 .............................C AGACATGACCAATTATTAATTATCGAAAAAGGCGAATTC 1729192 30 93.3 0 .................G...........C | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 97.7 37 GTTTTTATCTTACCTATAAGGAATTGAAAT # Left flank : ACAGTATTCTCTTGACATTGAAGCAGAAGAGATCCCATCTATTCAAACACTAGAAGACATTACACAATATCTTATAAAAATTAATGATTAAAATAAAAAATTTTAAATATAGAAAGAAGAATTCAAACGCCAACAGACAAAGAATAGCTAATCTTAAGTCAACTCGCGCGGCGACAGCTTATTGCCAGCATTCAGCCGCTTGTTATTTTAAAGACAGGCTTTAAGGGTATATAGCGACTGTGGTTGGTCTTTCCTTTTTCTTAATGAATACTTAGCGGTTAATCGAATCAACAATAGATGTTTGAATTCGTTGAATAGCAACGTATATTTTTGTCGTCGATCCCTAATAGCGCACAACCCCCAGGGGATCGACGACATGTTTATTTTCCTGCTTTTTTCTACAAATATCAGTATTTTTCCCATATTGACGCAATTTTCAAACTGGCGTATACTATACATATCCATTATCCACCATCCTTGATATATTAGCATTTATTGGG # Right flank : TATCCAAGCATAGTGTTAGTCGAATAGTAACGTTAAATTTAAAGCTTGAGGACAGATGTTCCTCAAGCTTTTTTGTGCGATTATGATGTGTTTCATTATGTTAATCAGTGTCTCCCATAATATAGGGTTATGATTTTATAGTGTTCTTGTTGTTGGATTATCCCAGATATCAACGTCAATTCGTGCTTCTATAGTTTGCTGCAGTGTCTCCCCCTTTGAACCTGCCAAGACACCGTGTCCTCTTTTCTTTTGGCATAACTGTGAATTTCATCGATTGTCGCGGGTTCATTAACTTCATCTTAATCGCTAATTTTTAATTAGTTATACTAGTGTAGTATAAAGATCCAATCAAGACTTTTTTAGGTGTATTTTAGAGAAATTATTTGTAAAATAAAGATGAACGTCTCTTCCTAGCAAATACTTTTATACGGTCTTATGGACAACCGTTCAAGCGAAGATGGAAGAAGCGTTCTAACATTGGATAAAAGGAAGTGTTACAT # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATAAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 6 1740995-1739421 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1740994 30 100.0 38 .............................. GAGTAACTGGCGTATCATATGAAAATGAAACAGGAAAA 1740926 30 100.0 37 .............................. TTGTCGAATGGGTAATATTTGAAGCAGGTGAAACATA 1740859 30 100.0 40 .............................. TCGAAACAAAAAAAGATATCATTTCAAATATTCGCAATGG 1740789 30 100.0 35 .............................. CAAGAATAAAAAAAGACATGATCTAGGCGGTCTAA 1740724 30 100.0 36 .............................. TATTTCTCCATCTATATCCCTCCTTTCCGGCTACAC 1740658 30 100.0 37 .............................. TTGCCAGTCATTGAAAAGCACCGAGCTCCTTGACAGA 1740591 30 100.0 39 .............................. TAAAAACCTAACGCTATTTGCTGCTGAATTAGTTTATTG 1740522 30 100.0 37 .............................. TTCCTAATCTTATCATCACCGATGATTTGCAACGTGG 1740455 30 100.0 36 .............................. CACACACAGGATGTGGTTGTGACTGTTCGTGAAAAT 1740389 30 100.0 36 .............................. GCAGGCGGCGCCGCGACTATTTTCAAGCGCGACGGG 1740323 30 100.0 39 .............................. CTATGCGGTTCTCACATACACATACGAATACGCAGGCGG 1740254 30 100.0 37 .............................. TATTAATTTTGACGAATAGACTTCCGCTTTCATGAAA 1740187 30 100.0 37 .............................. ACTTCACACTCCTCAATTGGGAATCGATGATCTTCTA 1740120 30 100.0 38 .............................. TCCTTTGTCGTTCCTTCTGGATTCAGTGAATAGACCGT 1740052 30 100.0 38 .............................. CCCGTTGCCAATGTGAAGGAGACTTACTATGAATCTTT 1739984 30 100.0 38 .............................. GCGTTCATTGGCGCAAACAAGAATATCACTATGTCTTT 1739916 30 100.0 38 .............................. TCTTGTTGTCCAGAGTGACCAATTACAACCGCTCTTCC 1739848 30 100.0 37 .............................. TCTAACAATAATTCTAACAGCTCCCGCTCCGCTTGAC 1739781 30 100.0 36 .............................. TAAAACAAAAGGGCCAAAGGCGTAGCCTTTAGCCCT 1739715 30 96.7 34 ..T........................... CTTCGATTAACCCGTTCGATGTCGGTCCAGCCGT 1739651 30 93.3 38 C.T........................... GAAGTAATCTTGAAAACAGCAGCACAGGCTGCCTGGGA 1739583 30 83.3 37 .TT.................A....A..G. TGTTTGTATATAGAGATAGAATGTTTTCTGTTTTAAA 1739516 29 83.3 36 .TT.................A....-...G TATTTCCGGCGTGGAGATGGGATGATATGGGATTCG 1739451 30 83.3 0 .TT.................A....A..G. | A [1739439] ========== ====== ====== ====== ============================== ======================================== ================== 24 30 97.5 37 GGGTTTATCTTACCTATAAGGAATTGAAAC # Left flank : ATGTCTTTATAAAAATATGATAAAAAATCGTTAAAAGGTTACATAATGATGTGATGTAAAAATCATGAGTATTGTAAACACTTCACATATGAAATGGTGACAGCAGGAACGGTAAAACAATAAAACAGATAGCAATGAATGAGCCAGAATAATGACTAACGATAACATGCCTAGAAACAGCTTATTGCCAGCACTCAGCCGCTTTTTATGAGGATATAGAGGGAACACAGGAGGTGTCTGCAGCCGGTCTTTTCTTTTCTAATGAATACTCAGTGGTTAAAAATTTTGAATCAACAATAGATGTTTGAATTCATTATAGCAACATATATTTTTGTCGTCGATCCTTAATAGCGCACAAACTCCAGGGGATCGACGACATGTTTATTTTCCTATTTTCTCCTACAGACATCAGCATTTTTTTATATTGACGCAATTTTCAAAACGGCGTATACTATACATATCCATTATCCACCATCCTTGATATATTAGCATTTATTGGG # Right flank : ACTGACAATCTATATCCAAAAGAGCTAACACTGATAATGATCCCCCTTTAAGTGGACAGTGTAAAAAGCCCATTTTTAATCAATGGGTGTTCCACTGTACTTGGAGGGAATTTTCGCATGAAAAGGATAAATATTTCACCGTTATACAGAGGAATTCCAACAAAGAGTGATTTACATGTATGCAGAGGGAGAAAATTGCTATTAAAAATTAGATGGTGAAATGGTAAATTTAATGGATTATAAAAAAGTGCTAGAACGTATTTTAATGGGAAAGCAAAGAAAAATCGATGTCGGAAGAATTGACGAAGAATATTGCATCACTGTAGTGGGGATTGGTTTGGATGGCAAAGTGGCTGAAGTAAATAATGTTTCCAAATACAAAAAATGGTTTAATTTTATTAGATTGGGTGCTCTTTCCTATGTACTTAGTTTCTTGCAAGTTTTATTAAAATACCGCCCTGTCAACATTCAATTAAATATTGATGGGGAGAAGCTAGTTT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTTTATCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 7 2729202-2728779 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2729201 30 100.0 36 .............................. TTTGATATACAAAAACTGGGATAAAATCAAGCAAGC 2729135 30 100.0 35 .............................. TTCCGCGGTATTCTTCAAACCGTCCGCAAGCAAAA 2729070 30 100.0 35 .............................. ACAGGATGACGGAGTGTATCCATACCTATGCGCCA 2729005 30 100.0 36 .............................. TAGTTTGCTGAAAGCAATCTTTCTTTGCTTGTACTT 2728939 30 100.0 35 .............................. CTGAAAAAGGTGTTGAAAAATCGAAAACTCACGGG 2728874 30 100.0 36 .............................. CACCTTGAGAACAAAACCTTTTTAACTGATTTTCAA 2728808 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 36 GTTTCTGAAGAAACTATGTATGATGTGAAG # Left flank : AGGAATACAAGTTATAAAAATTGAACCCCAATATACATCTCAACGTTGTAGTAAATGTGGCTATATTGATAAAGAGAATCGGCAAGAACAAGCTACATTTAAGTGCATCGAATGCGGTTTTGAGACAAATGCTGACTATAATGCAGCAAGGAATATCGCAATACCGAACATTGACAAGATAATAAGGAAAACGTTAAAAATGCAATAAAAATCCCTTGGGGCGATTCAGCGTCCTTAAGTCGAGAAGTGCCGTAATAAGCATCTAAAAATGCCCAACGGTAACACTCGATAAGGTAGTCCTGCTAGGCAGGCTGAAACCCTAGCCACAAAATCCGGCTAGGCATCATACAGAAAATTGTTGTCGAACTATAATCGTGCAAAAATCCCAAGGGATCGACGACATTTAAAATGTTGATAGCTAAGGGATTTACGGTTATTTCTAAAAAAGAAAATCTCTTGAGAGAGATAAGTTAAATGTTGCTTTATCAATATCTTTTGGG # Right flank : TTTGTTCGATGGAAAGTACGAAGATGGGAAAGTAGTTTCAAAAAGCCCTTCTCGTATGAGAAGGGGGGATTGAAGGATATTGTATGCCGACAATCTTGCCGACATTCTGCCGACCAAATTTTTTGTTCATGTAATTTTTTTATGGTTCATAATGACTTTAGAATGTTGTAAAATCGACCATTTTGAAATGAACTAATTCCCGATTTCACCTACTCCCCCACCTTGACAGGGTGGAGGTCGCTGGTTCGAGCCCAGTCGGAATCATCAAAGGAAAACCCTTGGTAGCAAGGGTTTTTTTATTTTCTCCACCCTTTAGTTTGTTAAAGTGGAGCTTGAAGGTCACAAAAAGGTCACATTAACCAAATTGGAAGTATTGTTGTAATCTTGTTACCATTTCTTTTTGCATTGAAGGTGTTACATGGGAATATACATCCATTGTAAAACTACTTTTGCTATGTCCTAACCTCTCAGCAACTACTTTCACATTTTCTCCTTTTTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTGAAGAAACTATGTATGATGTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 8 3264091-3261314 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZK01000001.1 Parageobacillus thermoglucosidasius strain TG4 scaffold01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 3264090 30 100.0 36 .............................. GAAGAAGGGAAGAGCTGGTGTCAGCAACGGTGGTGG 3264024 30 100.0 37 .............................. ATATTCGACAGTTTCACAAAACCGGACAGCAGATTTA 3263957 30 100.0 39 .............................. GACAATGTGTGTAGTTTTGTACACAGTAATAAGGCAAAG 3263888 30 100.0 35 .............................. CATTTTATGCCCGTTGCAATTCCCGCAATACAAAA 3263823 30 100.0 39 .............................. AACAACGGATGATTTTCTAACGACTCTACAGAAATCGGC 3263754 30 100.0 35 .............................. TCAGATGTCATTAGACGACATTGAGCGTGAAGAAA 3263689 30 100.0 36 .............................. TCAGCAATTAATTGAAAAGCAGAATCGTGTGTCATA 3263623 30 100.0 39 .............................. TTCTTTACATGCCTCGATCTCTCCCTGCTCGACCATCCG 3263554 30 100.0 38 .............................. TTATAAAAATAAAAAACTTTATTAGAGAAATAAGAGGT 3263486 30 100.0 39 .............................. CCGCGCTGAAAAGAAAGCTCATTTGTTTGAAGCGTTCGA 3263417 30 100.0 38 .............................. CAATATCTCTATTAGAAAGGCTTATACTTGCAAAGCGG 3263349 30 100.0 36 .............................. TCTTAATGTTCAGATTTCAGTGTTTGGCCAACAACA 3263283 30 100.0 38 .............................. TAATAACCGTCGCGCCCTTCGAGTTTGTACGCAAACAC 3263215 30 100.0 35 .............................. TATTTCACTCGTACCGTTCCAACCGGGCCATTCCG 3263150 30 100.0 35 .............................. CTCAAATAGAGAAGTTGCAGAAAGAAAAGCAACCG 3263085 30 100.0 36 .............................. CAGAATTTTGCTGAATGGCTCGATGGTGCCGGCGCT 3263019 30 100.0 39 .............................. GAAGACGTTGGAGGTAGCGGAAGTCATACTAAAGCAGAC 3262950 30 100.0 39 .............................. GAAGACGTTGGAGGTAGCGGAAGTCATACTAAAGCAGAC 3262881 30 100.0 38 .............................. TCGTATGCCATCATCAAACGTCCGAAGACCGCTTTTTA 3262813 30 100.0 37 .............................. TTTGAAGAATTCTCAAGAAAAATCTATCGGGGAGAAA 3262746 30 100.0 39 .............................. TGGATTTTATTTCGTATTCCTCAACGTCAACGACTTCCT 3262677 30 100.0 37 .............................. AAAGAAAATGATCTTCATTGGGATGGAATACCACTAA 3262610 30 100.0 36 .............................. GCCAAATCGCTTTCCAATTGGCTGCGTTTCGATTTC 3262544 30 100.0 39 .............................. TATTCAAAAAAACGAGGAATACGATCCAGCTAGTAACAC 3262475 30 100.0 35 .............................. TGTTTGAGTAAGGAAACACTTCTAAATCGTAACCA 3262410 30 100.0 35 .............................. TCCAATTCACAAATCATCACGAAATACTCATCGTT 3262345 30 100.0 35 .............................. TTTTTCACGACAAGGGCGATAGGATTATCAGACCG 3262280 30 100.0 35 .............................. TAAATTGTAGCTGTGTACAACTTTTCACCTCGTTG 3262215 30 100.0 35 .............................. ATATAAGCGTGTAGCAACCTTATACCTCCAACCTA 3262150 30 100.0 41 .............................. TCGCCATCATCATTTTGCTATGGAAGAATTGGGATTCTGTC 3262079 30 100.0 38 .............................. CCGTTAGTCGCAACTGCTGAATTTTCGCTTGTGTCTCC 3262011 30 100.0 36 .............................. GGTGTTTCCTCTTTTGTTTCACGTTCCGGCACTTCC 3261945 30 100.0 39 .............................. CGTCTAGCGGGATACGTTCGTCTTGAAGTATTTCTAAGA 3261876 30 100.0 35 .............................. AAATGTCGCTGTCATATCCTTTGGTGATTTCTTCG 3261811 30 100.0 39 .............................. GAAACCCAACTGGAATCGCTAACTGAAGGATTGAAAAGA 3261742 30 100.0 38 .............................. TGGGTATATAATCCGGAGCCGTTTGCTGTGACAACCGT 3261674 30 100.0 36 .............................. TGATATGTGATACTTGATATTTGTTTCATCCCCCTC 3261608 30 100.0 36 .............................. GCTGCCACAACCGCAGAGACGGGCTTCATCGCCCGA 3261542 30 100.0 35 .............................. AATGACAAAGAATACGAAGAACATCCAGGAATTTG 3261477 30 100.0 39 .............................. TCTAGGAGGTGTGGAAATATGAAAAAATTAATCAATCAG 3261408 30 100.0 35 .............................. TGACACTTCTTGGAGCAAGGTCATTGTACATATGA 3261343 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 42 30 100.0 37 GTTTGTATCTTACCTATGAGGAATTGAAAC # Left flank : TACGAAAATCAACATGGAGAAAAGCGGACGCATTTCTTTTCGCCATTTGACGCAGAATTTTCTAAGATGGTAGAAAAAAATTTTTATAATAAATTTCAAGCATATTTTCAACAAGCACCAACGGAGAAGGTGACAATAAGCCCAATCCGCGTAACGAAAAGGGATAAGGTGATTACCGTATTCAAAGGGTTCCGCATTAACGCGTGGAATGGTATGTATGAAATTCAAGCACCGCTCCCTTATGTGAAATTTATGTATGACGTCGGCATCGGATCGAAAAATTCCCAAGGTTTCGGCATGTTCGAATTCATTAAATAGCGGCCATATACTTTTGTCGTCGATCCCTAATAGCGCACAAACCCCAGGGGATCGACGACATGTTTATTTTCTCATTTCTCCCAACAGCCATCAGCACTTTTGAATATTGACGCAATTTTCAAACTGACGTATACTTTATATATCCATTATTCGCCAACCTTGATATATAAGCGTTTGTTGGG # Right flank : GTGGTCTGCGATTTGACAGCTTTCGTGTCGCGTGCATGTTTATATCTTATGGACCGATTTTGCCTGTTTTTATCTTAGCTACGAAGATTGTCCCCTTCTTGGCGCTTGCCGCTGTGAAGGGCTTTTTTGTTGTAATTCACCGCCACATTTGTTATAAAGGTGAAAAAGGGAAACAATAACAATAAAACAAACATGGAAAGAAGTTTTGAAAGCATGTTCCGTATTCTTAAAGCAGAAAAGACGGTTGATGTTTAAAATGCGGAAGTTTGCTGAATTGGAAGTAATATAACGGAAAGGGTAGAGTGTGGATGGGAGTATTGGACAGTAAAAAAATTATGGAAATAAGAAGCCGTATTGAAAAACGAGTAGTGACGCTGCCCGATGGCACTACTGTTCCATGCATAGGTCAAGGAACATGGCACATGGGAGAAAAGCCCCAAGAGAAAGCGAAGGAAATAAAAGCCTTACAACTTGGAATAGAATTGGGCATGAAAGTTATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //