Array 1 1864816-1865881 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026947.1 Corynebacterium yudongzhengii strain 2183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1864816 29 100.0 32 ............................. GACGAACCGCGGCGCAATCAACACACGGACCG 1864877 29 100.0 32 ............................. GAATAGGAGAAAAAATGACTTCACCTACACGC 1864938 29 100.0 32 ............................. ATAGCGGCGGGTTGCTTTGTGCTCGGCGGTGA 1864999 29 100.0 32 ............................. TATGGCATTTCCTACTACGAGGGGGGCGGAAC 1865060 29 100.0 32 ............................. TTTGAGGCAGGCCCTGTGGATGACCTGCGTGT 1865121 29 100.0 32 ............................. GACACCCGCGCCATAGTGCCGCCTTTGCCTTC 1865182 29 100.0 32 ............................. AGCTCCAGCACCCCGCCCGTGGGAGACACAAA 1865243 29 96.6 32 .....T....................... GTCGATTAGTGATTCGTTTAATGCGGCGGCGG 1865304 29 100.0 32 ............................. ATCACGCCCCGGGGTGTAGCCCGGCATGACAC 1865365 29 100.0 32 ............................. AACGTGTCATTCACTGAGGAAGACCGCGAGAT 1865426 29 100.0 32 ............................. GTAGGGGGCGGTAACGGGAACACCCGTAGCGA 1865487 29 100.0 32 ............................. CGCGGGGGCGGACAGCTCAGCAAGGGCGCGAT 1865548 29 100.0 32 ............................. ATACAAACGAGGTGTAAAACGCTCTAAAGGGC 1865609 29 100.0 32 ............................. CAGGGTGTCGTTGAGTGCTTCTCGGAAAGTTT 1865670 29 100.0 32 ............................. AGACCTCTCCTCCAAGGTGATGTCAGTGGTAC 1865731 29 100.0 32 ............................. CCTGCGGAGGTTACAGAGGGTTTACAATCTCC 1865792 29 100.0 32 ............................. TGGATCTTGATGATGTGGTGGAGCTGGTGCGC 1865853 29 86.2 0 .......................CAAG.. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.0 32 CTCTTCTCCGCGCACGCGGAGGTATTTCC # Left flank : CCCTTCGTGACGAAATATATCGGCGAGACATTCTCAAGGGAATGCTGGCTACGCTGATGGAGATCCTGGAGCCTCATCTGCCCGAGCGAGACGACGACCGGCTCATTGCTGGGCGCGGCGACGAGGTCGATGGGCACACCCAGTACGGCAAGAAATAGGAGTGCATCATGTTTCTCGTGATTACGGCGACGAGGATTCCGGATCATCTCCACGGGTATGTGAGCCGTTTCCTCACTGAGGTGGACACGGGGGTGTTCGTGGGGAACGTGTCGCGGCGTGTGCGTGACAATCTGTGGAAGCGATGTACTCAGGCAATGCAGGACGGCCGGCTGACAATGATCAACAACGACCCCACCCGGGAACAGGGCTTCGCAGTCAACACGTTGGGCCCAAACCGGCGCAAAATTGTGGACTTCGATGGGCTGCTCTTGCCGGTGAGCTTATCGGCCGTAAAACATGAAAACGATCGTATCGTCGATTAAACTCGCTGGTGCCGCACT # Right flank : CCCTGGTAGTGGTGTAACTGGTTTTTGATCCTTCGTTGGTGCTCAGGCGGGTAGTTGCATCAGTGGGTCGGTGTTTACCTCCGTCTGCGAGCTGGTGTCGGTGGTCAGGGCGAGTCGGCATCGGCTCAGGACTTCGAGGCCGAGGCAGCGACGTCCTTCGGCCCATTCGTCGGTCTGCTCGGCCAGGACGGCGCCGATGAGGCGGACGATGGCATCCCGGTTGGAGAAGATCCCTACAACGTCGGTGCGGCGGCGGATCTCGCGGTTGAGCCGCTCGGTGGGGTTGTTGGACCAGATCTTCCGCCACACGTCGTCGGGGAACGTGGTGAAGGCGAGCAGGTCCTCTCGAGCGTCACCGAGGTGGTCGGCGACCTCGGGCAGCCGGTGCTCGGTGTAGTCCAATAGTCGGTCGAACTGGGCGTTGACGGCGTCTGCGGTGGGCTGGTCATAGACGCTGTGCAGCATGGCCTTCACGGCCGGCCACATGGACTTCGGGCACA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2300169-2300421 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026947.1 Corynebacterium yudongzhengii strain 2183 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================= ================== 2300169 31 100.0 42 ............................... GAGGGTCGGCCCAGTTGGTGATCGTGGTGGCGATCATCTCGG 2300242 31 100.0 45 ............................... GAGGGGCGGGCGGGAAAGACGCGGAGACCGCGACCTGAGCCAACC 2300318 31 100.0 42 ............................... GAGGGGCCCCACGAGGTAGGCCCAACCACCTACCCACCCACC 2300391 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ============================================= ================== 4 31 100.0 43 ATCGCCAGCCTTTCGAGGCTGGCCTTTCATT # Left flank : TCGTCGACGACTGCGGGATCAATACCCGTTTCGTCGATGACCGCCTTGATCGTCGCGGCCGCCAGGTCGTCTGGGCGCACGCTGGACAGCACGCCGCCATAGCGGCCGACCGGGGTGCGCAAACCAGAAACGAGAAGGGCTTTATTGTCACTTGTGTTGTCACTCATCGTGGGCTCCTTGAGTGTGAAAATAGGGACATATTGAGCCACGAGATTAGTCCGCACTAAGCCCGATTATGTTGTTCAGATCACATTCATGATAAATCGGGTGGGTACTGATACCGAGCGGGGAATGCTGGGTTGTCTGGCGGTTTGTTGAGGGGATTTAAGCAACTACCGACGATCCATGAGGTTTTGAGACCCAAAAGGGGCTTTCGGCGACGGTAAGTTGAAGCCCCTCACACACTCCGCCCCACACAAATCAGACCGGGGCCACAGATAACGCGCTAGCTTTCATTGAGGGTTTCGACCAGCTGCACCCCGTCCATGAACCCCACACTG # Right flank : TAGATCCGCTTTTGATCCACCCACACGCCCCACAAGCTAACCGAGCTCCAAGGCAACCTAAACGGTCCCCAAACCCCACAACCTACGCCCCGCTCGTGGCCTTCTCCGCCGCCTCGGCCTTTTCGGCTTCGAGCTTGCGCTTGTTGCGGCGCCCGCGGCGCACGCCGACCCACGCCAGGGTCAGGCCGAACACGACTGCGGCGATGCGCACGAACCACAGCATCGGCTCGGAAGCACCGAGTGCTTCCAGGACGGTCGGGGCGTTGGTCACGACCAAGAAGGTGCCGACGACAGATCCCAAAGCGATCGGGTTCAGCCGCGTGACCAGCCACGCCGCGATCGGGGCGGCGATCACGCCGCCGGCCAGCAGGGCCAGCACCGCCGCCAAGTTCGCGACCAGGTCTTCCCAGAGTCCGATGACGAAGCCGATCGTCGCCGCCAGCGAGACCAAAAACTCCGCGGTGTTGACGGTGCCGACGATCCGGCGCGGCTCGCTGCGC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCCAGCCTTTCGAGGCTGGCCTTTCATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.00,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //