Array 1 482-1104 **** Predicted by CRISPRDetect 2.4 *** >NZ_MXAR01000078.1 Brevibacillus brevis strain ATCC 35690 VM4.mira_c89, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 482 32 100.0 35 ................................ GAGTTTCGGGAAGTGATAGAGGGCGACTCTAGTAG 549 32 100.0 34 ................................ CGGTATGTGTACAGTAGCGCGAACCATTCCTCCA 615 32 100.0 33 ................................ ATAGTAACATTCGCCATCATATAGCCCAGCTAG 680 32 100.0 35 ................................ TCAAATAAATTTGAAGGTTATCTCAATCAAAGGAG 747 32 100.0 34 ................................ ATTAACTTCCGTGGTTGATACGAGTTTGTCGGAT 813 32 100.0 33 ................................ GTGTCATTTTGAAACCTGTGAACAACCTCGCCT 878 32 100.0 33 ................................ TTAAATCAGATTTCATCTTGTCTCTGTGCGAGG 943 32 100.0 34 ................................ AACAGAGGCCTATGTGGTCAAGCCAGCGACCCGT 1009 32 100.0 33 ................................ TTGGTGGGAAGAAAATGCAGTTGATCATTGATT 1074 31 96.9 0 ...............................- | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.7 34 GTCACTCGCTACGCGCGAGTGTGGATTGAAAC # Left flank : AAGTAGTAGGTGATGATTCATGATGGTCCTAATAACCTATGATGTGAGTACAAAGACAGCATCGGGTCAGAAAAGGCTACGCCAAGTTGCTCGTTTGTGCGAAAATTATGGACAACGTGTACAAAATTCTGTCTTTGAATGTCTGATCGATCCTCAACAATTCACAGAATTACAATTTGAATTGAAAAGAACTATTGATCCTGCAACAGATAGTTTGCGATTTTATCATTTGGGGGCAAAATGGAAAGGCAAAGTAGAGCATATTGGTGCAAATCAAAATTACGATCCAGAGGGCTTTATTATGATTTAAGGACTGCGAACCCCAAGTGAACATTTGATCCCAGCGTGGTTCGCAAACGTGATCCCACTAGTTTTACGATTGGATGTGCTTGAATATTTGAAGATATGTAAGCGCATCTTTATTAGGTTCGCGGATTCGATAGAAAAAACACAAGTGTGGTAAGCATTTATTGGTTGTGCTG # Right flank : | # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCGCTACGCGCGAGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCGCTACGCGCGAGTGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 130093-130589 **** Predicted by CRISPRDetect 2.4 *** >NZ_MXAR01000010.1 Brevibacillus brevis strain ATCC 35690 VM4.mira_c10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 130093 32 100.0 35 ................................ GAGTTTCGGGAAGTGATAGAGGGCGACTCTAGTAG 130160 32 100.0 34 ................................ CAAACATGGAGGACGTGACGATCACAACCAAAAA 130226 32 100.0 37 ................................ ATTTGAGAAACAACTACGAGCGAAGGGGCTGTCTCGC 130295 32 100.0 33 ................................ AGAGCTTAGAAAACGTAGCAACGCCTGCAAACG 130360 32 100.0 34 ................................ AAGAGCTGATCGCCGCTGAACACACGTTTTTGAC 130426 32 100.0 34 ................................ CGATCCAGTCAAACATGCGACGGACAGGTATGAA 130492 32 100.0 34 ................................ TCTCCTAGCTACACGTGAGGCCCGGACAATGCTT 130558 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 8 32 100.0 35 GTCACTCGCTACGCGCGAGTGTGGATTGAAAC # Left flank : TTATCCTCCGTTTTTTTGGAAGTAGTAGGTGATGATTCATGATGGTCCTAATAACCTATGATGTGAGTACAAAGACAGCATCGGGTCAGAAAAGGCTACGCCAAGTTGCTCGTTTGTGCGAAAATTATGGACAACGTGTACAAAATTCTGTCTTTGAATGTCTGATCGATCCTCAACAATTCACAGAATTACAATTTGAATTGAAAAGAACTATTGATCCTGCAACAGATAGTTTGCGATTTTATCATTTGGGGGCAAAATGGAAAGGCAAAGTAGAGCATATTGGTGCAAATCAAAATTACGATCCAGAGGGCTTTATTATGATTTAAGGACTGCGAACCCCAAGTGAACATTTGATCCCAGCGTGGTTCGCAAACGTGATCCCACTAGTTTTACGATTGGATGTGCTTGAATATTTGAAGATATGTAAGCGCATCTTTATTAGGTTCGCGGATTCGATAGAAAAAACACAAGTGTGGTAAGCATTTATTGGTTGTGCT # Right flank : CTACGATTACAAAAATAAGCCAAACAACACTCAAGGAATCACTCACAACATGCGAATGTTTATAGACTTAGGCTAATGAATGGAAAAGACACGGCATAATAATAAAAAAATGCACAAGAGGTGAAACGCACATGCAAAAACAATCCTTTTCCATCGCACTCGACGAGGAGTTAACGCTGCGCGGCGACATTCATACGGAGAAAGCGGCAGGCTCAGCACAGCCACTACTGCTGTTTTGCCATGGCTTTAAAGGTTTCAAAGATTGGGGAAGTTTTCCCTACGTGGCCGACGAACTGGCTAAGCAAGGCATTACCACAATTCGCTTTAATTTTAGCTGCAATGGCGTAGGGGAGAGCTTGACGGAGTTCGACGAGCTGGAGAAATTCGGACGCAATACATATGCTCGCGAGCTGGCTGATTTGCAAGCGTTGACGGAACGAATTCTGTCAGGCGAGCTACCGTTACCCGAATATGTGGACAAAACAAAGCTGTACGTATTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCGCTACGCGCGAGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCGCTACGCGCGAGTGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //