Array 1 205801-206689 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHPXJ010000013.1 Bacteroides thetaiotaomicron strain DFI.3.60A BGFLKPLG_13, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
    205801	    45	  87.2	    30	...A.-...AA....-T..............................	CTTGCCGAAGTCGGAGATACCGTCCAAGCA	C [205810]
    205877	    47	  97.9	    30	.........................G.....................	TATAAAATTCAGCGTGCCAAACAGCACGAT	
    205954	    47	 100.0	    30	...............................................	ATGACCGATGCACTGGAGAAGGTTTGCAGC	
    206031	    47	 100.0	    29	...............................................	ATATAACTTCAAAAATCTAATTTACTTAC 	
    206107	    47	 100.0	    30	...............................................	TGTTACATCCGCTATTATCAGTAATATATA	
    206184	    47	 100.0	    30	...............................................	TTCAATTTACTGATACTACTAATCTCACTA	
    206261	    47	 100.0	    29	...............................................	AAAATAGTAATAGGACTTCTAAAAGAAAT 	
    206337	    47	 100.0	    30	...............................................	TTTTAACTAAAGAATATAATGCAGCAATTA	
    206414	    47	 100.0	    29	...............................................	AAAATATTATTTTTCTATTTATTTGTCTC 	
    206490	    47	 100.0	    30	...............................................	AAATCATATAAATATAATAAAATATATTAA	
    206567	    47	 100.0	    29	...............................................	CTCATTCTAACTACTCTTATTCATAAATA 	
    206643	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
        12	    47	  98.8	    30	GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC	                              	       

# Left flank :   GTTCACAAGTTACATAGGTGGGGATTCCATAGTTGGCGATCTCCTGCATAGCAGCCGCACGTTCTTGAGGTACCAGAGTATTCCGCATTATATCCGGATAAAAACGGTTCGTCTCAATGGTCGTACAAAGAACGGATTTCTTCATAACCGGATGCTCCAGATATTTCAGAAAACGGGCGGGATTCTTTGACTGGAAGAGATACTTGTTATCAAAACCGTCACAATAGTCCAGTATCTGCTCAATCCATTCTGACGGGACATTAGCCGCCCATTCATCCGTACTGCTGCCTACAAAGATAAAGTTGCCTTCACCCAGATTCACTTTCAGTTCCTTCAGCTCCAGACGCAAGGGAGGCAGGAGAAGTTTACGTCTCATAAAACAATATGAACAAGAGTGTTCACATTCGCCTTTCATCGGGTTATATGTATGTGAAACGAAGGCATACATGTTCCCGGTACTTTTATTCAGTGCCATATATCATTATGCTTTTCACATCCAT
# Right flank :  CATATTTTATATAACAAAATGATTTCCAACAAGTTAAAAAGAAAATTAGAAAAGAAAAAAAGTCTGTTTCCAGCACAAAATCTCGCATTAATGCGAGATTTTGTTTTTTAAAATAACTCTAATTGTTGTCCAGGCGTATTAACATTCTGCATTTTCTTTCCATAAAAAAGTTCTATATTACCAAACTGTTTATCGGTAATACACATGATTCCGACATGTCCAAACTCCGGGAGGAAAGATTTAACTCTTTTTATATGTACTGTAGCATTTTCACTACTAGCACAGTGACGCACATAAATGGAAAATTGAAACATAGTAAAACCATCCTTTTGCAGATTCTTTCTAAAGTCCGCATAAGCCTTCTTTTCTTTCTTCGTCTCAGTCGGCAAATCAAAAAAAACAAGTACCCACATAATACGATATTCACTAAAGCGATCCATTATCGTTCAGGATAAGCTATTCGACGAATTTCTCCATTGAAACATTTGTAAAGTGAGGAA

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:68.09%AT]
# 	Reference repeat match prediction:         F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.20,-3.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [63.3-85.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,1.05   Confidence: MEDIUM] 

# Array family : II-C [Matched known repeat from this family],   
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