Array 1 93679-93162 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTOW01000006.1 Escherichia coli strain MOD1-EC6181 MOD1-EC6181_6_length_173989_cov_36.8262, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 93678 29 100.0 32 ............................. ATTAAGGCGGACGAGGAAAAGGCAGACGTTAC 93617 29 100.0 32 ............................. GTCCATGGCCTGACGAAGCTCGTAATATTTTG 93556 29 100.0 32 ............................. ACGACCAAATGATCTACGCGTATTGCCACCTC 93495 29 100.0 32 ............................. TTAGGCACAGAAAAAAGGCTACTCAGCGAACT 93434 29 100.0 32 ............................. TATCGACCCCCTTTCTCACGCATCGCCATCGT 93373 29 100.0 32 ............................. TTAACGTCTGGATCCTGTGTGCCATGGACCGT 93312 29 100.0 32 ............................. ATCAGGTAATCGAGACACCTGTCAGCACTCTC 93251 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 93190 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCCGGGAAGGCAGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 120649-118790 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTOW01000006.1 Escherichia coli strain MOD1-EC6181 MOD1-EC6181_6_length_173989_cov_36.8262, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 120648 29 100.0 32 ............................. ATCGCTTTATTAATCCAGTACGCCAACGCGAA 120587 29 100.0 32 ............................. GCGTGGAGTAACGGACAACTAAAACAGCCGGA C [120582] 120525 29 100.0 32 ............................. GGCTTTTTTGAGAAAGATTTACGCGGTCGAGT 120464 29 100.0 32 ............................. TGAGCCATTGCCTGGTATTTGGCAATTGTGCG 120403 29 100.0 32 ............................. TTGCCCGGCGCACAGGTGCACATCCCGGAAAA 120342 29 100.0 32 ............................. GGGGCGAGGTGATCTTTCAATAACAATACAGC 120281 29 100.0 32 ............................. AGGTTCAGGAGAGTGCAATGCGTATCACAACT 120220 29 100.0 32 ............................. CCGATTCCGCTGGTCTTGCGAACTCCCCTGAA 120159 29 100.0 32 ............................. AAATCATGGATTGATGAAGATGGTTATGAAAT 120098 29 100.0 32 ............................. GCGTCATTTTTATATTCGTTATCTCCGGAGCA 120037 29 100.0 32 ............................. TTCCTGACACAATCCCCTATCACGTCGCCACA 119976 29 100.0 32 ............................. TGAGCAGATGCATATAGCGCCCGGGGTGTATG 119915 29 100.0 32 ............................. CTTTCGCGCATATGCTCGATCACATAACCGAA 119854 29 100.0 32 ............................. TGAGAAAGAATTATTCTCTGACATGGGGCCGC 119793 29 100.0 32 ............................. GCCAATGATCCCTACTCGTACCCCCAAACGGG 119732 29 100.0 32 ............................. AATGGCGTTTATTTCTCCCATGTAGTGAGCTG 119671 29 100.0 32 ............................. TCTTCACCGGTTTTGATTTCAAGTTTTTTGAG 119610 29 100.0 32 ............................. CGTGCCGCTCTTGAGATCGGCGGAAAGTTTAT 119549 29 100.0 32 ............................. CGATCTTCAATTCTGCAAACGTCCAGGTAATA 119488 29 100.0 32 ............................. GCGCGGCCTGTCTTATTCCGTCTAATACCCCT 119427 29 100.0 32 ............................. CGTACGCGATGTGGATCAGTGCCGCGTTCTCT 119366 29 100.0 32 ............................. GCGAACTCGTAATTTATCAGGCTCGAATTCAG 119305 29 100.0 32 ............................. GCGCTCACGTTTAGTGCCAGAGCCAGGCGGCG 119244 29 96.6 32 ............................T TGAGATGCCGTTTGCCGTTTTTCTGTTTTTTC 119183 29 96.6 32 ..............T.............. TTCTCAGGCTTTACCCACTCTTTTACAGTGTC 119122 29 96.6 32 ............................A GAAGTTCGGCATTGCCCGCAAAGATTTGTCAC 119061 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 119000 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 118939 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 118878 29 93.1 32 .A.C......................... GAGCCTGACGAGACTACTGAGGCCGTTCTGTC 118817 28 89.7 0 .A.......................-..A | ========== ====== ====== ====== ============================= ================================ ================== 31 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGAATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : TTCAGGTATGTTCAGGCCGGGCAGTTTCCCGCCCGGCCTTCCTCACTTACGCATTCGACCAGCTCTGGATCGAATCCACATTCCCCAATTCCCCATGCATCACTTCATACGATTTTTTCAGGATCACATCAGTATGTTTGGTTAGGTCTTTGAAAATGCCTTTATTCATCGCGTCGTAGCGTTTGGCATTGCTCTCAATCGGTATAAAGATATCTTTCACGCGAACCATCTTATCAACAGCCGTTGCGTAATCCGGGTATAGCCCCAGACCTACCGCTGTATTAATCGCTGCTCCCAGACTTGCACAACCGTTAATGGCGTTACGGCGTGCCGGAAGGTTGAACACGTCGGCAAAAATTTGCATAAACAGATCGCTGTTCGAACCGCCGCCAGTAATGATCACATGCTTCGCAAAGTGATTCATTTCATTACACATATTGTCGTAATTGTTCTTCAGCGTTAGCGCCACACTTTCCAATATCGAACGATATATCCATGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //