Array 1 15160-10400 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUYE01000218.1 Clostridium sporogenes strain 66_CBOT 1047_25111_397190_790+,...,68+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 15159 29 100.0 35 ............................. TTGTGGAATGGGAATGGTACAGTAAAAGTAGTTAT 15095 29 100.0 37 ............................. TTCAATGCTATGATTATTTAATTACTTCTGAAGGAGA 15029 29 100.0 35 ............................. AAGAATACTATCTTCTGTCCTGTTTCTTTAACTGT 14965 29 100.0 36 ............................. ATGCATTTTATTTATATGACATTGTTTTATAAAATC 14900 29 100.0 37 ............................. ATTCTTTATATGCTGCACTATTTTTAAGTTTATTATC 14834 29 100.0 36 ............................. AAGTCTAAAAATAATTGGGTTAATGAAGAAATGATG 14769 29 100.0 37 ............................. AGGTAAAAGAATAGAGGATTGTTATAGTTCTGATGGA 14703 29 100.0 37 ............................. TTGTTCATAAGTAATATTGTTTGGAACATATTCAGCC 14637 29 100.0 36 ............................. TTAGTTCGGTCTTTCAATACTTTTCAAACTGGCAGG 14572 29 100.0 37 ............................. TTTTACAAAGTTTATCAATCGGTGGCTTTACTTGACC 14506 29 100.0 35 ............................. ATAGAATTAAAAGTATTTTACAATATGCTTTATTG 14442 29 100.0 37 ............................. TTTTATCTATTTCCCATTCTACAATCTTATAACCTTC 14376 29 100.0 36 ............................. TTTGCTTTTCTTCTTGTAATTCTAATCTATCACCTT 14311 29 100.0 36 ............................. AGTATCTATAACTACAACTAAGTTTTTAAGAATAGT 14246 29 100.0 37 ............................. GTGTATTCTATTGGATATTTATCATCCATAAATAGAT 14180 29 100.0 37 ............................. AAGATAGTGATAGTACTAATAAACATGGTAAAGATGA 14114 29 100.0 37 ............................. TATAATAGCTTAGCATTTGCAGTAACATTTTTATCAT 14048 29 100.0 37 ............................. CATAATCTGGTGAAGAATCAATGCTATATTGCCAATG 13982 29 100.0 37 ............................. TATTGCTTGGTATACCAACTTTATCTATAAATTTTAT 13916 29 100.0 37 ............................. TAAGCTGCCCTCATCATAGCGTCATTCATAAGTTTTG 13850 29 100.0 38 ............................. AATAGTTATTCGGATGGAATTAATATAACTATATTACC 13783 29 100.0 36 ............................. ATAACTTCTACATAAATAAATTTATTTAAAAATTCA 13718 29 100.0 37 ............................. TTTACAACATCATCAACTCCAATAAATTTACCATTAT 13652 29 100.0 37 ............................. TCATAACTTATTATTAAAACATCTTTCATTTTCAAAT 13586 29 100.0 37 ............................. GAGAAAATAGTTTATTTATAAATACCAAAGCCAAGGC 13520 29 100.0 35 ............................. TCATTCCAAATACAATAAATCTCTTTTCCATAAGC 13456 29 100.0 36 ............................. GAGGAAGCCTTTGATAAATTAAGAAGTGCTATTTCG 13391 29 100.0 37 ............................. TAGATAATAATATAATACTATTCTGTATAATGCATTA 13325 29 100.0 37 ............................. AAGAGCGGCGGAGTTGTTAGCAGATTATTTAAAATGT 13259 29 100.0 37 ............................. TGATAATTTATAGCTATTTTATCTAATAACATTGTAG 13193 29 100.0 37 ............................. ACGTAACTGCAAATACTTTGTATCTCGATAGGAATGT 13127 29 100.0 36 ............................. AAGGAAGGCAGATTCGTAGTTATACCACCATGGATG 13062 29 100.0 37 ............................. CGGTAAAGAAGAATTAATAAAATGTATTGAAAGATAT 12996 29 100.0 36 ............................. AATAATGAAATAGCAGAGTATATAAAAAAGGTTGTT 12931 29 100.0 39 ............................. TTCCATATTACAGCAATTATCGCAATCATAATAATATTG 12863 29 100.0 38 ............................. GTAGATGATATTGAAATGACACACTATGGATTAGAACA 12796 29 100.0 38 ............................. CTTCTTACAACCAATGATTTTAAGACTTGATTTGAAAT 12729 29 100.0 36 ............................. GCAGGAATTGGAGGACTTAGAAAGTATTAAACTAAA 12664 29 100.0 36 ............................. GAGTTTGTAGAAGAAAAGACAGAAACTAAATCAGAA 12599 29 100.0 37 ............................. GGAGTTAAATCTAAAAAGAAAGCAGAACAAAGGTTAA 12533 29 100.0 37 ............................. TTGGATTTAAAATGTAGCGCTACTATTAGAAAAATGT 12467 29 100.0 36 ............................. GATTCAATTAACTTTGGTATGAAATACTTACAAGAC 12402 29 100.0 36 ............................. GATGAAAAAGCATGGAAAAATAGTGTAGGTGGTTTA 12337 29 100.0 36 ............................. TATTTTCATATTAATAACACCCTATTTACGTTTGAC 12272 29 100.0 36 ............................. AGGCATATCTTGAACAATTCCACATCATGGAACATT 12207 29 100.0 37 ............................. CTGCATTAAATACATTAGGCAATAAGATATGGGATTA 12141 29 100.0 36 ............................. GATTATGTAGAAGGTTATAACTGGGGTAAAGTTCCC 12076 29 100.0 38 ............................. GATAGTTATGGAAGAGAATCAGTTCAACTTGATAATTG 12009 29 100.0 37 ............................. TTCCATAAAGGTTTTATTTTAACATCACCTACACCAG 11943 29 100.0 37 ............................. ATAAAACTATTTCCGAGAATGTTAAAAAAGAAATGAA 11877 29 100.0 36 ............................. TTGTTTCCTGTAGATAAGATAGTAAGAAGATGAGAA 11812 29 100.0 37 ............................. CACAACTATAATCAAAATTCCTTGTAGCTAATAATGT 11746 29 100.0 37 ............................. GTTATAGAAATGGGATTATTATTAAAAAATAAAAAAA 11680 29 100.0 38 ............................. CTTTTAAATGTTATAGTATCAATAAAGTCAGGATTTAG 11613 29 100.0 36 ............................. ATTGATGGTCTAGCTCCTATAACCCAAAAATCGCCT 11548 29 100.0 37 ............................. ATATTCTGGAGCGGGAACATCTATATTGATTTCTTTG 11482 29 100.0 40 ............................. CTATTAATTATACAATAAAAAGAAGTAGAAAAATCTACTC 11413 29 100.0 38 ............................. ACAGGAGAAAAAATCAACGGAGCACCTAACTCTATAAA 11346 29 100.0 37 ............................. TTAATTAAAAGTCTATTTTCACCATATTTTAGAACTA 11280 29 100.0 36 ............................. AAATTATAAAGATATAATGTTTTTACTGAATGAAGA 11215 29 100.0 37 ............................. AGAGTTAACGTGTTTAATTACACACAAATATTTGATG 11149 29 100.0 38 ............................. TGGTTGGATCATCAACGTAAGGATGTTTTTCAATAATA 11082 29 100.0 37 ............................. ATTAATATAGAAGTTCTACTTGCTTCTACAGCTTCAG 11016 29 100.0 36 ............................. TAGAAGATGTTTTAGAGGATATTAGAAAACAATTTA 10951 29 100.0 37 ............................. TATGAAAATATTTAGAAATAGAATTTTTAAAACGTAT 10885 29 100.0 36 ............................. GTAACTAATACTCAATATGGATGGGTAGAAGATGAA 10820 29 100.0 37 ............................. TTCAACATTTCTTGAACAGTATAAGATACTGCCTCAT 10754 29 100.0 35 ............................. TTGTAACTTATGATATAAGGACTATTTTTATAAGA 10690 29 100.0 36 ............................. GAAGTAGCAGTCCCATATCTTTCTGGATTATTATCA 10625 29 96.6 36 .........................G... TAATTGTATGCTTGAATTATACCAAGCAAATCATTT 10560 29 100.0 37 ............................. GTAGAAACATTTAAATTTAAATCTGTTGTTTTTATTT 10494 29 96.6 37 T............................ AACAGCAATAAAAATAATTAAATTAGTAGAATTGAGC 10428 29 89.7 0 .............A......G..A..... | ========== ====== ====== ====== ============================= ======================================== ================== 73 29 99.8 37 CTTTTATATTAACTATGTGATATGTAAAT # Left flank : AGGTGATGATATATATAAACCATTAAAGGCTTGGTGGTGATAATTTATGTTTGTTATATTGACATATGATATAGAAGAAAAGAGAATTAATAGAGTTAGAAAAACGCTAAAAAAATACTTAGTTTGGACTCAAAATTCTGTGTTTGAGGGAGAAATAACAGAAGGAAAGCTACATAAATGCCTTTCTGATGTTAATAAATTAATTGACAAGAAGTTTGATTCAGTATATGTTTATAGAGTAAAAAATTCTAAAAATATAAAAAAGGATGTAGTTGGAATAGAAAAGAGTTTTGATGAATTATTTTTATAATTAGTTTTGCATTAAACCTAAATTTAAATTAATTAAGGTTAAACTATTGAAATTACTAGCTTTCTTGACAATAAAAAATAAATACTAAAAACGCTACTGAAGGTTTACTGCAAAATGTGGAAAATATGATAGATTAAGCATTGCTATAAATACAGTAATGGCGGTGGTTACAGGACTTTTGAATTTTAGG # Right flank : CATGCTTCATCTATCATTAAATCATGATCAACAATGGATTCTATATACTCAAATATTGAGAACCTAGCGGTATCAAAATCATAATATGTAGCTAAATTTACTTCTTCTTTCTTTAGCGAAGCGAGAAAGGGTTCAATATAGACATTATCATAGGGATAATCTTTACCGCTGAAAGAGTGAATTATATTAATTTCTTTAAATATGCTTAACTGTTATCAAGCTTAATTTAAGATTTTTGGAAAGATTTATGCTAGATTGCTGTAAAATTAATCAAGGTAGAAAGAAATCTGCCTTGATTTTATCTGCTTCTATAAGTTTGTATATTCATCCTATGAAGGATTTTAAAATTTATTATAGAATACTTAGTGTAGTTAATGAATGAAATAATGAAATTTGCTATATGATGTTAGGATGTTTTTAATAGTAAATAAAAGAATACTTATTTATTTAGGAAAATAAAAAGGGGGTTATACTAATGAAGATAATAGTTATTGGACCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //