Array 1 29235-28843 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHH010000197.1 Enterocloster asparagiformis isolate MGYG-HGUT-02328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================ ================== 29234 32 78.1 28 A..G.....G..T....A......C......C CGTCTAAGTAGTACCAGCGGCCGTTTAT 29174 32 78.1 28 C.G......G..C..C........C......C CGTCCAGATAGTACCAGTTTCCATTGAT 29114 32 93.8 28 .G.T............................ AATCCAGGAAATACCACCGGCTGCCGAT 29054 32 100.0 28 ................................ GTCCCAGGTAATACCATGGGCCGCCGAT 28994 32 75.0 28 C.TT.T...C......GC......C....... GTTCCAGATAATACCAATTTCCGTTGAT 28934 32 78.1 28 .A.AC................CA.....T.T. TCTCCAGATAATACCATTTCCCGCCGAT 28874 32 84.4 0 C.T...................TA.......T | ========== ====== ====== ====== ================================ ============================ ================== 7 32 83.9 28 GTACTGCCATCCGGTGAGCATGGCGCCGCTGG # Left flank : GCGGGACCATGATGACGCGGAAGGAGGCCGCGGCCTGCCTTCAGGTCACGGCCGATACCCTGAGAAACTGGGAGTTAAACGGCCTGCTCACGGTAAAGCGCAGGCAGAACGGCTACCGGGTCTACTCCGCCGGGGATATCCGGCGGCTCAGAATCATCCGGCTTTGCGCTGCGCCAATTACTCCCTGGCGGCCATTCTCCGTATGCTGAGCGCCCTGTCCTGGGACCCGGCTGCCGATATCCGTCAGGTTTTAGACACGCCCGGAGAGGACGAGAGCGTCATTTCCGTTTGCGACCGTCTGATCACCTCCCTGGATGCGGCGATCCGCAACGCAGGGGAGCTTAGAGATCAGCTGTATCATATGAAAATGCAGTTCTGACCGGCCGCGCCGCCGCTTACTGCCGCCAGACTCCGCTGCCGTCCACATAGTATCCGTCCGGGGTGTGCTGGTTGGCGTACATGGCGCCGTTGCCGTCAAAGCAGTACCATCTGCCGTTGAT # Right flank : TGTTGAAGTAGTACCATGCGCCGTCAATATTTTTCCAGCAACTCACCGGGTAGTCTCCGTTGTTGTAGCGGTACCACCAGCCCCGCTGGTTTTGAATCCAGCTGCCCTTGCTGTAATTTTCCGCTTCATAATTTGAAAACGTGCTCTCATCGGAGTAGTCGGACCAGGAGCCGGCCTTGCCGTCATAGCGTGCGATGCCGCGGACGCGGAAGGTGTAATCGCCTCCACGGGTGATGTCGCTGCGGAAATCATAGACGGTATTGGCGGTGGTGACGGTGGTTACCAGCGTTTTGTTGCGGTAAAGGCGGACTTCGTAGTGCTTGACGCCGTCGATCTCATCCCACATGGCGTAGGAGCCGTCCCACTCCAGGGACTGGGCCTGTTCGGGCCTGCCCTCCACCCGCTTTAAGTAAACTTCCAGCTGGAGGCTGTTTCCGCCGTCCAAAACCTTGGCCTTTCGGAACTGGGCACCGCAGCCGCTGAGCTTGAAATGGCTGGAA # Questionable array : NO Score: 3.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.20, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTGCCATCCGGTGAGCATGGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [5-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1170-62 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHH010000204.1 Enterocloster asparagiformis isolate MGYG-HGUT-02328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1169 33 100.0 35 ................................. CAGACGATGGATGCGGCAGCTATTGCCAACGGCGG 1101 33 100.0 34 ................................. CATTATGTCCTCTGGCTCCGCCACCTCCTCCTCC 1034 33 100.0 33 ................................. ATCAGATTTTTGAGATAGAGGATAATATCGAGC 968 33 97.0 35 ....................C............ TACCATTTGGTAAAAACTAGGATTGCTGCCCATGG 900 33 100.0 35 ................................. TTGGGAATTATGGCAAGCGAAGGAGGGCAGCGGGA 832 33 100.0 34 ................................. GAATCCATTCTTTTTCAAAAGATCTGCACAATAA 765 33 100.0 34 ................................. CCCCCATTCTGTACCAAACATTATTTCGACATTG 698 33 100.0 35 ................................. GTATTCTACAGGAGGAAAATATATGGCTGCGGGTA 630 33 100.0 34 ................................. ACCAGACATTAGATATTCTATGCTTACACCAAAA 563 33 100.0 34 ................................. ATCTAGGCTGTTGGCCATGCCGTATCCACCATTG 496 33 100.0 33 ................................. GGATCACCGTTAAAACACTCCACCCATATCTCC 430 33 100.0 35 ................................. CAACTCAAATACATCCATGCGACGGAGTACGAGAA 362 33 100.0 35 ................................. TGGACATCGTGTGAATTTCATTCACCACTGGTTTC 294 33 100.0 34 ................................. TCTGAATTGCTCCGTGAAAACACACTGAGTAATT 227 33 100.0 33 ................................. CTGCTTCTCTGCAAACGTCAAAGACTTTCAACA 161 33 100.0 34 ................................. AGAGCTGTTTGATATCGTATCTCCTGGAGGGGAA 94 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 17 33 99.8 34 GTCACAGCCTGCGAAGGCTGTGTGGATTGAAAT # Left flank : GTTGACGGAGATACAGGAACGGTGAAACTGGTGAGAAAAAACTATAAGGATTTGGGGATGGATATAGCGACGGAATGCGAGCCGGTAAAAACATTGAAAATAATGGCCTGTGCAGAACCTCTCCGCCACGATGTCAGTTATCCGCAGGTGGAGGGAGACGAAAAGGAGTCGTTTATTTGGTTCAACAATAACAAAATAAATGATGACTCGAAAAAGCAGCAACCAGCATTTTCAAAAATACTTCCAAAGCCAGAGGAGGAACTGGATACAAATAATAGTTCTGGAAAACGTCTGCATACGAAAAAGGCAACCCCAAAAGCATACCACCGTGCGAACCCTAAGCGCACATAAAAACCCCAGGACATTCGCACCGAGATTAGGAGGAGAAAGAGGAGGAAAAAGAGGAGAAAGTGTGAAGAGGGGTTGATTTGTTGGAGGGAATGTGTAGAATATGAGATAAGAGTATCGAGATTTGTGAGGAAAAATTGGTGAGATTTGCT # Right flank : TATTTTGACGTGGATTCAGCCACGTTGTATGAAAAGTCACAGCCTGCGAAGGCTGTGTGGAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCCTGCGAAGGCTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.50,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 675-35 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHH010000246.1 Enterocloster asparagiformis isolate MGYG-HGUT-02328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 674 33 100.0 34 ................................. TTTCAGCTTTTGCGCCACTGTTCTTCCGTCCTCG 607 33 100.0 35 ................................. CCGGTATTCAGCAGCGTCGCCACAAGTCGTATTCC 539 33 100.0 37 ................................. TCGGGTTAAAATTGATGGTACATACGAAACATTTTGG 469 33 100.0 33 ................................. AGCCGACGAGAGAATGGCGGCCTTCAGGCGGGC 403 33 100.0 34 ................................. CACTGATCACGGCGTAATTATCCCCGCTCTTCAA 336 33 97.0 35 ..........................C...... ATGTACCAGGGACCGGGGAAGGCCGGTAAGATCGC 268 33 100.0 35 ................................. GCTATTGCCAAGACATATGCGAGCATTGCAGCAAT 200 33 100.0 33 ................................. TAAACCCATTGTTTTTTGCACTATCTGTATATG 134 33 100.0 34 ................................. TGATCAATGTAGGTGTCTGATGTGTAATCCGCAG 67 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 10 33 99.7 35 GTCGAGGTCTGCGAAGGCCTCGTGGATTGAAAT # Left flank : ATTATTAAGTCTGTCATTTTGTTTTCCTCCGTTCCTT # Right flank : TAATCGATTATAGACGGCGATTATATCCCGTTTGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGTCTGCGAAGGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA // Array 1 8320-7752 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHH010000245.1 Enterocloster asparagiformis isolate MGYG-HGUT-02328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 8319 33 100.0 37 ................................. CACTGGCACGGAGCGGATGCCGGATCCGGCGGAGCTC 8249 33 100.0 33 ................................. TTTACAAACCGGGACTGCCGGTCATATTTCTCC 8183 33 100.0 33 ................................. CTGGCGGTCGCCGGTGATGGTGAAGAGATTGCC 8117 33 100.0 33 ................................. CCAGTCACTCTTACCATTAGCTCGTAGATCTTT 8051 33 100.0 34 ................................. ATAGTAACATGCACATTTGTGCTTGTCCTGTATT 7984 33 100.0 33 ................................. AGAAAATCCTTCTTTAAAAGCCATCAGCATAGG 7918 33 97.0 34 .....................A........... ATAGGCACGTCCATAAATGGATAAGTTCAGCTCA 7851 33 81.8 35 ..........A.A.......TT.T......T.. ATTTAGGCGCTATTTTACCATCCGCTGTCGTTTTC 7783 32 72.7 0 ....G..-.......AAA...TC......G..C | ========== ====== ====== ====== ================================= ===================================== ================== 9 33 94.6 34 GTCGAGGTCTGCGAAGGCCTCGTGGATTGAAAT # Left flank : TACATGTACCGGCTGGTTTGCCATATTATCACCAT # Right flank : TATTATGTAAAATATATCAATGCACTCTAGCTTGTAAATCTCCTTGCATCCTCAACTTTTACATACTATAATAAAACAGCGTAAAACGAAAATGACAAAGATAAAAACACAAACTGGTCGGTAGTCCAGTTGCGGCTTCTCATCTTTCAATCTCTCCTCTCAAGCCGTCAGTAACCTTCCTCCTTAGGTCGTCCATTCTTTGCCCATTCAAACTTTTAAGGAGGACAAGAAATGGACAAGGCAGCGGTAACACTACAAGTATTTTTCGAAGATTCTTTTTGGGTAGGAATTTTTGAGCGGGTGAGTGCCGGGAAGTTAGAGGCATGTAAAGTGACGTTCGGTCCGGAACCCAAGGACTACGAGGTTTTGGACTTCATCCGGAAAGGTTACTTCGGGCTGCGGTTTAGTCCGGCTGTGGAAGCAACTGTAAAGAGCCGTCCGGCAAGCCCCAAGCGAATGCAGCGGGAAGCCAGGCGCCAGGTTCAGAATGTGGGAATTGG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:0, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGTCTGCGAAGGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 1 407-36 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHH010000247.1 Enterocloster asparagiformis isolate MGYG-HGUT-02328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================== ================== 406 34 97.1 34 T................................. CCATTCCTGCCACTTCTGACGGCCCGGTTTTTTC 338 34 97.1 34 G................................. GCCACAGTGCCACCTCCTGCTAACTGTAGATAGC 270 34 100.0 34 .................................. ATAACTGGTTTATTGGCTGCTGCGGCTGCTGCGG 202 34 100.0 32 .................................. AATGACACCAGGCACAAGCATATCATCCTGAC 136 34 100.0 33 .................................. AAAATAGTCTGTGTGCAGCTTCTGGGCGTTCAT 69 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ================================== ================== 6 34 99.0 34 CGTCGAGGTCTGCGAAGGCCTCGTGGATTGAAAT # Left flank : AAGAGGTTGACAGCCTGCGCTTTTATCATTTGGGAAACAGCCATAAAGCAAAAGTGGAGCATGTGGGACTTTGCAAAGGGATTAATGTGGAAGAGCCATTGCTTTTTTGAGAGTATTTGATGGATGTTTTTCAGGGGAGCCAGCTTAAATGAATGGGACGAAGAGGGGATTTCAAGAGAAATGTAAATAAATGGTGAGTATTTCAGGGGATATTGGGCGTGGCTGGGTCGAAGCGATTGAGGAGATGAGTATGTATCGCTTAAAGTCGTACCGGATTGAGTGGATATTCCTTTAGGGCGGCTATAGGAATCAGCCGATCAATACGTTCAGGTGCGAAACCCAAGTGAACATAAATCCCCCAGCAGATTCGCACCAAGATAATAGACGAGTGTCGATAAAATGGAAGGTTATTTAATAAAGGACTTGGGGGAATGTAGTGAAATAAAATGATATTTGTGTAAATGTGCTGAAATGATATGCTTTTTATTGAGCATTTTTGC # Right flank : TAAAGGACCACGGAGAGTCCATTGCTGATTTGATGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCGAGGTCTGCGAAGGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : NA //