Array 1 42529-40408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZTS010000001.1 Bacteroides sp. AN421 scaffold_1_size_463201, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 42528 47 87.2 30 .......A.C.T.....TT.............G.............. TGTCATCGAGCATCTCTTCTATATCGACAT 42451 47 97.9 29 ..........A.................................... GAAAAAGCCAAGAAACTAGCTGAAGAGAA 42375 47 97.9 29 .......................................A....... CTTATTTAAAATCATTCTAAACAGGGTAT 42299 47 100.0 30 ............................................... GACGCAGCCTCCAAAAAGGTAATTGCAATC 42222 47 100.0 30 ............................................... TAGGCGAATTATCTAATAAGGCTGACAATA 42145 47 100.0 30 ............................................... AGGCGCCCCACAAGGTCGTCACTATGCCAT 42068 47 100.0 30 ............................................... ACTTGGTTTGTTAAGCATCACAGCCCAAGT 41991 47 100.0 30 ............................................... AGAAATGAATGCTTGGATAGATAATCTACT 41914 47 100.0 30 ............................................... TTGGCTGCCGCCTTAGCGACCTTGGCTAAT 41837 47 100.0 30 ............................................... AAAGCCATATCAATATAATTTACTTGCGGT 41760 47 100.0 30 ............................................... ACAAAGGTCACGGGGAACATACAACGGAGG 41683 47 100.0 30 ............................................... CATTCTTACGTTCTATCACATGTCCGAACA 41606 47 100.0 30 ............................................... CTTGACAAATTACTGAAAGACGCGGCAAGT 41529 47 100.0 30 ............................................... GTAGGCGAAAAAACTATACGCTACATAACT 41452 47 100.0 30 ............................................... ATCAACTACTTTGAAAGCCAAAATGCCGTT 41375 47 100.0 29 ............................................... CGTGTGCGCGCATGAATGTGGACACCAGC 41299 47 100.0 30 ............................................... TGCGACGCTGTGCATGAACCCACGAAACAG 41222 47 100.0 30 ............................................... ACACGAACGATAGCCTGCTGATTAGTCTGC 41145 47 100.0 30 ............................................... ACTTCTGAGTGTAGCAATTCTCTAAATGTA 41068 47 100.0 29 ............................................... CTGCCTTGGCGACTTTGGCGAACGAGTAC 40992 47 100.0 30 ............................................... GTCGACATCCTAAAGTCGAAGACTTTTGCG 40915 47 100.0 30 ............................................... TTAATTGCGATGATAAAGATAAAAAAAACG 40838 47 100.0 30 ............................................... TTTCAACGGCATTTTGTGTCTCGAAGTAGT 40761 47 100.0 30 ............................................... ACAATGCAAGGACGGTACCAAGATGGGTGT 40684 47 100.0 30 ............................................... CGCTACGCTATGCTGCAACCCGCGAAATAG 40607 47 100.0 30 ............................................... TCGACGTCTACAGTTATCGACGAGTATCTC 40530 47 100.0 29 ............................................... GTGTTCAAATTATCTTCGGTTACTAATCT 40454 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 28 47 99.4 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Left flank : TAATCGTGGAGAATGAATAATGGAGAATTGAAAATTAAGAATGCGGCCGAAATTAATTATCAATTCTCTATTTTCAACTTACGAAGCATCTAATTTTCAATTCTCAATTATCAATTAACGAAATGGACAAGAAAACTATTTGGAAAACCATTATCCAGACGCTGGTCACCATTCTGACCGCCATTGGAACTACGCTGGGCGTCACCAGCTGCATGATGTAGCCCTGCGCTGCATGCGACAACACAAGCACTGAATGAAACACTCGCCGCCTCAGGAACCTTGCAAAACAAAGGAATGAGGGGCGGGTGATTTGCTTCACGCCACTCGTTTCTCTAAACAATCTTTTACACCCAATCAGGCTTCGAAAGCCAGCTATATTGCAATTACAAATTACAATTACAGTAAAACAAATTCTAGCACAACCTTACTATTCGACTTAGAATTAGCAGCTTTAAGACATCAAAGGACAGCTGATATATCAGAATTTGAGGTTTAACTTC # Right flank : TGATTATATATAACAACTTATATAGCAATGATTTATAAAGAAAATCAGAAATAAAAAAGAAAGTCTCCAGAAATGAATAATCCCACTTTGAATGGGATTATTCATTTTCAAAAAAGCTCCAACTGCTGACCAGGAGTGTTTACAGCTTGAGGTTTCTTACCCAAAAACAATTCAAGATTGCCAAATTGCTTGTCGGTAATACAAAGAATGCCAACTTTACCATATTCCGGTAAAAATGACTTTACCCGCTTAATATGTACATCCGCATTCTCGGAACTCGCACAATGACGGATATAAATGGAAAACTGAAACATAGTAAAACCGTCTTTCTGCAATTTGTTCCGAAAATCGGTAGCTGCCTTCCGGTCTTTCTTCGTATCGGTAGGCAAGTCGAACAATACCAATACCCACATAACTCGATATTCACTGATTCGGCTCGTCATCGCTCAGGATAAGCTATCCGCCTCAATTCACCGTCGAAGCACTTATACAACGAAGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //