Array 1 56410-64368 **** Predicted by CRISPRDetect 2.4 *** >NZ_QHGD01000039.1 Acinetobacter baumannii strain ABAY10003 contig_39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 56410 30 93.3 30 ............................CA CCATGCATCATCCCGCTTAAAATCCATAAG 56470 30 93.3 30 ............................GG GAAGAGTTATTGATATTGCAGATCCATTGT 56530 30 93.3 30 ............................CG CATGATTAGGATGCTCGGTACGCCCAACAC 56590 30 93.3 30 ............................CG GCATGGATCTATTACGATATATGCACAGTA 56650 30 96.7 30 .............................G ATGCATCAAGAACGAACTGTTGAAGATGTG 56710 30 100.0 30 .............................. TCACTAAAATATCTAACTCAGTTCTTAAAG 56770 30 96.7 30 .............................A TCGGTTAAAGATGCAAATGGTGAACAATCT 56830 30 93.3 30 ............................GC TTTGATCAGTAACTCAATGTATGAGTCATC 56890 30 100.0 30 .............................. ATCGAAAAATGGGAGTATAACCATGCATGA 56950 30 100.0 30 .............................. CGCAAAGATCATTAATCAAGGTCATGATGC 57010 30 96.7 30 .............................A AGAAATCAAAGACTTATCTGGTCAGGTTGA 57070 30 100.0 30 .............................. TGGTCAAAATCATTCACACAACCATTCACA 57130 30 96.7 30 .............................A TCGAAGAAAAGGACCGTCGGTTCTTAGTGC 57190 30 96.7 30 ............................T. CAGAATCACCGCATCGAGAACGTGTAATTA 57250 30 96.7 30 .............................A CATTCAATTTGATCAAACGGAATTCATGTT 57310 30 100.0 30 .............................. TAGATAATCATCACCCAGTATTAAATGTGG 57370 30 100.0 30 .............................. TGCGTTTTTGAAAGGTCGCCATTGTTTAAA 57430 30 93.3 30 ............................TC AAATGAACATTATTTGTGGTGAAAATGGGG 57490 30 96.7 30 ............................T. CTAAAAATTCAGGCTCATTACTAACGCCCT 57550 30 100.0 30 .............................. CTGCATTCTGAAGTGGAGTTTCTTCTAAAT 57610 30 96.7 30 ............................G. GAGTGTCGGTAGGAATTTCAATCCACCATC 57670 30 96.7 30 ............................T. GCCGCAATATCTCAGAAAAGCAAGATCAGT 57730 30 100.0 30 .............................. GATAGTATCTTGGGCGCAGGCAAAAGGAGC 57790 30 93.3 30 ............................GC CTTGTCGCTGCTCTTGCCGGATAATCGTTC 57850 30 96.7 30 ............................C. GCATGGATCTATTACGACATCTGTACAGTT 57910 30 93.3 30 ............................TC TTCCGTGTTAACAATTGCTTGAGCTATTGA 57970 30 93.3 30 ............................TA ATTGAAAATGCTCAATATGTAAAAGATTTT 58030 30 100.0 30 .............................. GGTGTAAACGACAATCTCTTAACCTTCCCC 58090 30 93.3 30 ............................TA AAGGTTCCTACTAACTACAATCCAGCAACA 58150 30 93.3 30 ............................TA ACGGTGCACGAACTGTTATTAGCGGCAAAA 58210 30 93.3 30 ............................TA CAGACCGAACACTTCTAAATAACTATGCCG 58270 30 96.7 30 ............................G. TACGTCTACGGTACGTGGTTAGCATGATTT 58330 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 58390 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 58450 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 58510 30 96.7 30 ............................T. GCTCTAAGCATTCCGAAGCAAGGAAATGTG 58570 30 100.0 31 .............................. CACATTTTGGGATGGCAATAGCATTATTTGT 58631 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 58691 30 96.7 31 .............................A TTTCATGCTTATGTGCTAAATTCATATTTCA 58752 30 96.7 30 ............................G. GTATTACCGTCATTTTTATGATGGTACATG 58812 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 58872 30 96.7 30 ............................G. GTTGTAATTTCGCTTGTATTGATCATTGCC 58932 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 58992 30 93.3 30 ............................TA TGATCTATACATTACAACAAGCAACACAAA 59052 30 93.3 30 ............................TC AATGTTATATCACATTAGATTAACAAAACA 59112 30 93.3 30 A............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 59172 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 59232 30 96.7 30 ............................G. CGGTCGAATGTCTGGGACTTTTTTGTTATA 59292 30 96.7 30 .............................A AGGCATACACCCAGTAGAAGATAAACAAAA 59352 30 100.0 30 .............................. ATATGTGCGTAACCGAGCAAGCTTGTCACG 59412 30 100.0 30 .............................. ACCGAAAGATGACAAAAAGCACCCTAAGGT 59472 30 96.7 30 .............................A GTGAAAAAAGCTGACAGCAAAATAAACTCA 59532 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 59592 30 96.7 30 ............................G. CCAAGTCTTAAAGATGTTCAATGGGCAATG 59652 30 96.7 30 .............................A TCGAATCAAAATATTAAAGAGTTACGTCAT 59712 30 96.7 30 .............................A TTCGTGTTGACCAGGAATTAAAAGACACTT 59772 30 96.7 30 ............................C. CAAAGTATTTAACACGGTTGTTAGCAGGAT 59832 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 59892 30 96.7 31 ............................T. GGTGTTGAACAATGCTTAAGTGAAATCACAA 59953 30 93.3 30 ............................TA TATCAATCTTGTTAAGAGAAGCCGCATCAT 60013 30 96.7 30 ............................G. GATGTGTATGTTCTATTAGTGGTGTAAATC 60073 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 60133 30 93.3 30 ............................TA GTCCCGAAATTTCAGTAGGTGGCTCATAGC 60193 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 60253 30 93.3 30 ............................TA ATACACCAATCCCGCTTAGAACTTGTAAAT 60313 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 60373 30 100.0 30 .............................. CATCATTGCAGTCTTATAAGAGCCAGGCTG 60433 30 96.7 30 .............................A ACTGCATAGATGACCATTAGAGACATCCCC 60493 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 60553 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 60613 30 93.3 30 ............................TA CTAACTGTAAAACAGAAGACTTGCCAACTT 60673 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 60733 30 96.7 30 .............................A TGGCATTTGCTGCTGACGGGGATTTCGACT 60793 30 96.7 30 .............................A ATCAAAATCGTGGCAGATAACAAAGCGATC 60853 30 93.3 31 ............................TA ATCTCGGTATTTACGCCAAGGGCGCTATTCA 60914 30 100.0 30 .............................. GATCTACCCTTTGAGCTAGATAAAACTTTT 60974 30 96.7 30 ............................T. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 61034 30 93.3 30 ............................TG AGTATCGCAAATCAAACATTGCCAAGCTTT 61094 30 96.7 30 ............................T. AGATAAAGCAGGGGATAAAGGGACGTTAGC 61154 30 93.3 30 ............................TG TAATACTAGAATCTGTATATGCCAGCTCTT 61214 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 61274 30 96.7 30 ............................G. GTCGGGTAAAACAAGGGTAATGACTTGTGT 61334 30 93.3 30 ............................TC TACAAAGGCAATCTGGCTCTTCAATTCGTG 61394 30 93.3 30 ............................TG ATTGCGGACATTTAGTCTGCTGTATTTCTT 61454 30 100.0 30 .............................. CGTGATCAAACCACATGCCTTCATCTTCAT 61514 30 96.7 30 .............................C TTTAAGCGCAAACGAACAGCATCAAGATCA 61574 30 93.3 30 ............................TG TTTCATCTGTCTTGATAGCTTCCCCCATAA 61634 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 61694 30 96.7 30 ............................T. GTGCGAGTGTCTACGAGCCAAGCCGAAATA 61754 30 96.7 30 .............................G TTGCTACTGAATTAGTTGTTATTGCTAAAA 61814 30 96.7 30 ............................T. AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 61874 30 100.0 30 .............................. TAATATAGCTTCTTCCAACTACAATATATT 61934 30 93.3 30 ............................TA TTTGCTACGCCACCAGCCATACCTAGAAGC 61994 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 62054 30 96.7 30 .............................A CGTCAATTCAAACGTAAAAAGCTACTGAAG 62114 30 96.7 30 ............................G. CAGTATTACTCCACACTTTTTATATTTCAC 62174 30 93.3 30 ............................TG TACCTCATCAATAAAAATAACTGATGTTTC 62234 30 100.0 30 .............................. AAAATCAACCCGTATTAATACCGAATGCAC 62294 30 93.3 30 ............................TA ATAAAGAGGTTTTTAACTGGTATGAATCGA 62354 30 96.7 30 ............................C. CATGACGATGCTTTTCTAACAAAGTCATCC 62414 30 93.3 30 ............................TG AAAAACGTAACGCTGAATTGCAGGCTAAAA 62474 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 62534 30 96.7 30 .............................A CTGAAGTGAAAATTGTTCATTAATGGTTAT 62594 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 62654 30 96.7 30 ............................T. AGCCGTTTGGACTTTACCAATCTATATTTA 62714 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 62774 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 62834 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 62894 30 93.3 30 ............................TG ATGCGGGTTGTCCACCAGTTATGACTACTT 62954 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 63014 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 63074 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 63134 30 96.7 31 .............................A AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 63195 30 93.3 31 ............................TG CATCGAAGTCATAGAACGCTTTGAGTTTCCA 63256 30 96.7 31 .............................G CGACTTTGAATTGATGCCATCTCCGCCTTTA 63317 30 93.3 30 ............................TA TTCAGATTGGCTGCGGCCTCACCTGTAGCA 63377 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 63437 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 63497 30 96.7 30 ............................T. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 63557 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 63617 30 100.0 30 .............................. CATCGAAATTTAGTTCTAATTCTTTAATTT 63677 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 63737 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 63798 30 100.0 30 .............................. TGAATTAATACGGCTTACTGCAATTGGTTG 63858 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 63918 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 63979 30 96.7 30 ............................T. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 64039 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 64099 30 96.7 30 ............................T. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 64159 30 93.3 30 .......T.....................A CGTGAACAATTGTTTTAGCTTTGAACATTA 64219 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 64279 30 90.0 30 A......A.........T............ TTTGATCTTTACTTATTCTCGCTTCAAACA 64339 30 70.0 0 .......A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 133 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //