Array 1 17666-20869 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCUE01000015.1 Streptococcus oralis subsp. tigurinus strain B_003802_10 s_oralis_RS_003802_10_ID_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 17666 36 100.0 30 .................................... GATGCTATACACAGCATTTGTATTTTTCCT 17732 36 100.0 30 .................................... TCTGGACCTTGCTGATTACAAACGTTTATT 17798 36 100.0 30 .................................... AGTTACCTCAAGCCAGAGAGTTCAAGCGTT 17864 36 100.0 30 .................................... TCCAGTTATCAAGCGTGTCAGCGCTAGCCT 17930 36 100.0 30 .................................... TATTGAAATCCATGACATCCAACGAGATAT 17996 36 100.0 30 .................................... TGATTAGTTCTGTTTCATTTTTTAATGGGA 18062 36 100.0 30 .................................... CTCCGTGACGGTCTAAAAGCTGGGAAACCT 18128 36 100.0 30 .................................... TACCTAGATGGTCTAAATATTTACGGATAT 18194 36 100.0 30 .................................... AATTTCATTTTCTTATCTGTTTCACCACGT 18260 36 100.0 30 .................................... TCCATCTATCGGATAATTCTCCAAGGTCTT 18326 36 100.0 30 .................................... TGTGCAAAGAAATAATAAAAAAGAGCAACA 18392 36 100.0 30 .................................... CTTTGAACAATGCCCATGATGTCAGCAGTA 18458 36 100.0 30 .................................... TCACGGTGGTTCTCACGGGGGGTCTAAAGG 18524 36 100.0 30 .................................... ACTAGAAGAATCAACCTTGACAATCAGGCT 18590 36 100.0 30 .................................... CCAACTTCTACGATACTTTCCGTACCGTTT 18656 36 100.0 30 .................................... CCATTTAGGACTTGAGAGCAAACCAGCCTC 18722 36 100.0 30 .................................... TTTTCACAATCATTGAGTCTCTGTTGAGCA 18788 36 100.0 30 .................................... CAAAAAAGTTGTTGTTTGGGTACTCACCGT 18854 36 100.0 30 .................................... ACAGAAAAAGATCTACAACGTGAAGCATGA 18920 36 100.0 30 .................................... ACATCAAGGATAGTTTAGTCGGCGAACCTA 18986 36 100.0 30 .................................... TCAAACTTTAAACAACTTTCACAATCGTCT 19052 36 100.0 30 .................................... ATGAAGTTGAAGAAGCTCAACGTCATGCTA 19118 36 100.0 30 .................................... ATGGCGAGAATGCCCGCAAGCGTCAGAACT 19184 36 100.0 29 .................................... TCACGAACACGACGATACACACCAAGGGG 19249 36 100.0 30 .................................... TATATCAATGATGAGGGAGAATCTCCGTCT 19315 36 100.0 31 .................................... CCAGTTATTATTAGTTTAGTTTCTGCTTTGG 19382 36 100.0 30 .................................... GAAGAATTTCAATGTTTAGCGCTGGTGTCG 19448 36 100.0 30 .................................... ACCACATAGTTATTCAAGAGGGTGAATACT 19514 36 100.0 30 .................................... AGACTCTAGAAGCTAACCATACGCGAACTA 19580 36 100.0 30 .................................... AGTTGGTAAAATTACAGTCTGGCAAGCATT 19646 36 100.0 30 .................................... CGGTATTTCTCAGGTAGTTTTGAAGGTGCT 19712 36 100.0 30 .................................... TCACTTGGACTTTATGTATGGTTTTCTCTG 19778 36 100.0 30 .................................... AAATGCTATAATTAAGTCAGAAAGGTAAAT 19844 36 100.0 30 .................................... CGCAGTTGGTGGACTTGCTAAAACGGGAGT 19910 36 100.0 30 .................................... ATTAAAGATGATAATTTGTTAGGAAGTAAC 19976 36 100.0 30 .................................... TTTTGGAATTTTGTATTGTTTTTGATGTCA 20042 36 100.0 30 .................................... GCTACACGCATTATTTATGAAGTGGACGTT 20108 36 100.0 30 .................................... TTTAATTTGGTTGGCTAGTTTGTTTATCTA 20174 36 100.0 30 .................................... TCTTCTTCTGTCACGTTTCCTTGCGTCATG 20240 36 100.0 30 .................................... CTTGATATTCTTCCTTAACCATAACTTCGT 20306 36 100.0 30 .................................... AGACCCAGAACACATAGAGGTCAACGGTGA 20372 36 100.0 30 .................................... TGGGCAAGAAGTTTGATATCAACAACTTTG 20438 36 100.0 30 .................................... TCGCTCGTGATTGCATCAAAATAGAACGGA 20504 36 100.0 30 .................................... AAGTGGTAAATGGGAATGGTCAGCAATTTG 20570 36 100.0 30 .................................... TTCTTCATTTTCTTTATCTGTTTTGCTTGG 20636 36 100.0 30 .................................... TTCTTCATTTTCTTTATCTGTTTTGCTTGG 20702 36 100.0 30 .................................... TGATATTTCACTTAATGAGAGTGGATACCT 20768 36 100.0 30 .................................... TCTCTTGTGCATTAGAGATAATAAAGTGAC 20834 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 49 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTCAATGACAAGCCCGAAGTCAAATCTATGATTGAAAAGCTGGTAGCTACGATAACAGAATTGCTGGCATTTGAGTGTTTAGAAAACGAATTAGACCTAGAGTACGACGAAATCACCATTCTAGAGTTGATTGATGCGCTAGGGGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTGTTCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTCTTCATCAATGCGATCGCCTATCTATCAAAGGATGAGTTGGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAAGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCCGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AAAGCTACTCATTTTTTGAGTAGCTTTTTAACTATTCCATCCCTTACACATAGCTCATTCCCTTATAGCAAAAGAAAACGGCTAGTGCAATAAAAAGTACGGTTGCTCCAATTCGCTGGCTGGTACTATACATCCTTTTTTCCCATTTGACTGGAAAGATGATCGCTAGAAAAGCCCCGCCTACTGCGCCACCAATATGCCCTGCTAGGCTGATTCCTGGGATCAGAACACTTCCAATGATATTTATCACGAAAAGTGTCAGATAGGATTGCCCCAACTGCTGAATATAGGGGTTGCGAGTTGCGTAACGCAAGACGATAATCGCAGCAAATAGTCCGTAAAGAGAAGTGGAGGCCCCTGCTGCTACAACTTTCGGTGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCTGATAAGAGATAGAGAAAGAAGAACTGCTTAGAACCGAAAATCTCCTCCACTTGTCGTCCAAGAAAGTAGAGCGAAATCATATTGACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //