Array 1 28-2564 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBBX01000049.1 Lacticaseibacillus saniviri JCM 17471 = DSM 24301 strain JCM 17471, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 28 36 100.0 29 .................................... CGACGGCTTGGTAAATGACCCTACATTTC 93 36 100.0 30 .................................... TGGTCAATCTCGGCATGCTTTCCACAGATT 159 36 100.0 30 .................................... TTTGGGCTTTGATTATCGTAGGAGGACTTC 225 36 100.0 29 .................................... CAACCCGGTGATTGGAATCCTACAACAGG 290 36 97.2 28 .G.................................. ACTGAGATAACCCGTCATACTTGTTTGG 354 36 100.0 30 .................................... AATGGTACGCGGATACCAAGCTGCTGTTAC 420 36 100.0 30 .................................... GCCAGAAATCGGTGGCCGCTTATCGGTTTC 486 36 100.0 30 .................................... CAAGCGCCAGCCATCTTGGCTCCCGTGACA 552 36 100.0 30 .................................... GTCAGGCTTTGATGGGTCCTTTGCTTCCTG 618 36 100.0 30 .................................... CAACCACTTTGCCAAATATCGTTAAGCCAT 684 36 100.0 30 .................................... AGCAGGTTGTCAGGTGCGAATCCTGACCAG 750 36 100.0 30 .................................... CTGCATCACGAAGTCGTCGCCATTCAGGTG 816 36 100.0 30 .................................... TAGCGCCTTTGTTGATGTTGTAGTACAAGA 882 36 100.0 30 .................................... AACGTTGTTCCGATACACGTCGCGGCCTAT 948 36 100.0 30 .................................... CTGTTGTTAGATACTTGTCGCGTCGCTGCA 1014 36 100.0 30 .................................... ACATCCAGTGGCCCTGCATCTTCTCATACG 1080 36 100.0 30 .................................... GGCAGAGCTGATGCAGATTGAAGAAGTGCC 1146 36 100.0 30 .................................... AGCACGGAAGAGATTTGGATTATCACTGAT 1212 36 100.0 30 .................................... TATCATTTAGGTCAATAGACAACTGATTAT 1278 36 100.0 30 .................................... TGCGATAAACAAAATGGCCACCTTTGGCAG 1344 36 100.0 30 .................................... GCCGCCACTAGATTGTTGTCCCTTGCTTTC 1410 36 100.0 30 .................................... TACATTCGCGTCAGTCCAAACGAAGGACTG 1476 36 100.0 30 .................................... TTGATAGATGACTGAATAGCCATCATCACC 1542 36 100.0 30 .................................... CCCCACAATTTTAACAATGTCAAACTATTT 1608 36 100.0 28 .................................... TCTGATTTTTATTCGCTGTCTTTTCTAG 1672 36 100.0 31 .................................... GTAGTCACCGCGGTTACTATCAAATTGAGCG 1739 36 97.2 30 T................................... CACGCGCTAAACCTTCCTTCAAAGCATTCA 1805 36 100.0 29 .................................... TGTGATGCTCGCAATATTCGTCATTTTGC 1870 36 100.0 30 .................................... GACGCCTTGGGTAATCGCTGAGTACCATCG 1936 36 100.0 30 .................................... CGGTCAAAGTCGGAATAATCATCGTCATGT 2002 36 100.0 30 .................................... ACGCCACGGCACACGATTACAAGTCTGGCT 2068 36 100.0 29 .................................... CCTGTATCCCGTACTTATGCTTAAATTAG 2133 36 94.4 30 TG.................................. GATAAAGTTCAATCGTGTTGGCCACGTCAT 2199 36 100.0 30 .................................... GCTATCAGCTTCAAAGTAGGCTGGCATATC 2265 36 100.0 30 .................................... TGTTGCTGGTGATGGTGGAGTACAACCGGT 2331 36 100.0 30 .................................... GCCGCCAGATTCTGATTGGATAACGCCTTG 2397 36 100.0 30 .................................... CTTTATCCAACGCCTTCACCCATGCCGGTG 2463 36 97.2 30 ....................T............... TGAAGTCTGTGTAAGTGATTTGGTCGTTGA 2529 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 39 36 99.6 30 GTTTTAGTTGGATGTCAGATCAAATAGGTTAAGCAC # Left flank : CCATGATAGTTTCGGCCTGGATTGTTTG # Right flank : | # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTGGATGTCAGATCAAATAGGTTAAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [25.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 826-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBBX01000014.1 Lacticaseibacillus saniviri JCM 17471 = DSM 24301 strain JCM 17471, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 825 36 100.0 30 .................................... CTGTCGGTAAGGTTGTTGGTGCATTAGTAA 759 36 100.0 30 .................................... CCGCTAAGTTTGATGATCAGTATGAGCGTT 693 36 100.0 30 .................................... ATATTATGGACCGGGTGCATTTGAATCACA 627 36 100.0 29 .................................... ATTGGTGCCTCTCTATTTAATAAACTATC 562 36 100.0 29 .................................... TACGGTTTTGGGCTGTCGAACCATCAACA 497 36 94.4 30 CG.................................. CATACGAATTGAAGAATGAACGCTACTGGT 431 36 100.0 30 .................................... TCAAAACTGAGTGCATGAGCTTTTCTTGTA 365 36 100.0 30 .................................... GACAGCAGCAAGTAAAACAGTGCAAGCAAG 299 36 100.0 29 .................................... TGCGATTAACCAAAATTAGTGAAGCTCGA 234 36 100.0 30 .................................... ATGTTCCTTCAATGCCATAAAACTCACGCA 168 36 100.0 30 .................................... GTAAATTTTCAAAGCCCACGAAAATTTCCG 102 36 100.0 30 .................................... TGACCATGATAGTTTCGGCCTGGATTGTTT 36 35 97.2 0 ...................................- | T [27] ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.4 30 GTTTTAGTTGGATGTCAGATCAAATAGGTTAAGCAC # Left flank : GAGATTGACCTCGACAGAACGTTTCAACGTGTTGTCCAGAAACAGCTAATCAAGCTAATGACTGATCAGGAGAAACAGCGTCTCGTCGACCTGTCTCAGCAGTTGGCAATGGAGGTTTTGTCCCGATCGTTCTTACTCGACTTACCACTCAATGTTTCGCCAGAGAATTCAATCCCGGCAATCATGAAGATGGTCAAACTGAGTTATGACGAAGAGATAAAGCAGCATCCCTATGATATAATTGAAACCGTATTGAAGACACTAACGGAAGTTGATGATCATCAACTTTCAGTATTTACTAACCTGAGTCATTACTTGGATGTCAGCCAGATTAATAATTTGGTCGAAGTAGTGGCAGATGTTGACATTGAAGTTCTTATCATCGAATTCTCAAAAGTGAGTCGACAGGATATGTTTGCAAATTGCGACTATATCTACATTGACGAGGATTTTGTGGCGTTCGATGATGAGCATAATTAGAACCCAATGATAAAAATGCG # Right flank : A # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTGGATGTCAGATCAAATAGGTTAAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //