Array 1 111785-115778 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVNE010000005.1 Roseomonas sp. BU-1 NODE_5_length_169095_cov_176.877185_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 111785 29 100.0 32 ............................. GCACGCGCCCTTCCGTCAGCCCCTGGATGCCC 111846 29 100.0 32 ............................. GGTCGGCAAGCTATGCCGACGATCCCGGTTCC 111907 29 100.0 32 ............................. CAGGACCTGACGAAGTTGTCGGACGTTGCGCA 111968 29 100.0 32 ............................. CGGGATCATCACCCCGGAGTTGATTGCCGAGC 112029 29 100.0 32 ............................. GCCATCGTCACGAAATACCACGGTCCTACGGG 112090 29 100.0 32 ............................. CGGCCCTGCCAGCGTCGATGAGCCGTCTTCGG 112151 29 100.0 32 ............................. TGCGGAGCACGATGGAGGCGGAGGGGCTGAAG 112212 29 100.0 32 ............................. CCGGGTGGATCAGAACGGGATGCCCGTGTTAT 112273 29 100.0 32 ............................. GGGGGTGACCGGGGATTGCCGGGACCGGGCTG 112334 29 100.0 32 ............................. GGGGTAACGTGTCTCGGGCCGGTCCATACAAT 112395 29 100.0 32 ............................. GCGCCGGCCGCGCCACGCATGTGCGCCTCGCA 112456 29 100.0 32 ............................. CACAACCTGCCGGACGCGGTCACGCGCGACAT 112517 29 100.0 32 ............................. GCGCCACGGCAGCCACCAGAATGGCGGAGGCC 112578 29 100.0 32 ............................. GCGGGCGAGTCCGATCCCGCCGCCGCCACGGG 112639 29 100.0 32 ............................. TCGGATGGATCAGAACGGGAGGCCCGTGTTAT 112700 29 100.0 32 ............................. CCAGCCCAAGACCCGCCACCCAAACCCAAGAC 112761 29 100.0 32 ............................. ATGCGGCCGGGCTTCAGGATGCGCAGCAGGTT 112822 29 100.0 32 ............................. GAGCACGGCGGGCCACTGCGCTACATGGCGGC 112883 29 100.0 32 ............................. CTCGACCAGCGAGCCCGGGTCCTCCCGGTCGC 112944 29 100.0 32 ............................. GCGGGGAACCTCGCCTTCCAGCAATGCACGTT 113005 29 100.0 32 ............................. CTGCGCATTGTCCGCAATCAACTTGACGGTCC 113066 29 100.0 32 ............................. CGGCCTTTTCGACACGGCTCATGCGCGCTTCA 113127 29 100.0 32 ............................. CCGGCGAATGCCAGCAGCAGACGATCGACAAA 113188 29 100.0 32 ............................. GCGGCTGTGATTATCCCCAAAAGCGACCAGAT 113249 29 100.0 32 ............................. GCGTTGTGGGTGGCGAGGCCGACGCATGGGTT 113310 29 100.0 32 ............................. TCTCAGAATGATTTTGACATTGCCAATGGCAG 113371 29 100.0 32 ............................. CCGCCGCAACTCGTGTTCATGGCGCAGGCCGT 113432 29 100.0 32 ............................. CTTTCTCGACGGAGAAAGACGGGATGTTTGCC 113493 29 100.0 32 ............................. CGGAAAAGGCTGGCCAAGCGCACGCAAGCGCG 113554 29 100.0 32 ............................. GCACGCGCCCTTCCGTCAGCCCCTGGATGCCC 113615 29 100.0 32 ............................. TTGTTGCCGTCGTAGGCGAACCCGTAGGCGTT 113676 29 100.0 32 ............................. TCGCGTGTGTAGGGCGACTGTCTGGCTACGCG 113737 29 100.0 32 ............................. GCAATCGCTGGACTGCGCTTCCCGGGTGGAGG 113798 29 100.0 32 ............................. TTGCCGCCGGTGAAGCTGTTGCCGGACACGGC 113859 29 100.0 32 ............................. GCGTTCCCCGGCGTGAAATTCAGCGTCCGGTC 113920 29 100.0 32 ............................. CGTTGCGTTTGGCGACGCGCGATGTGTCCGCC 113981 29 100.0 32 ............................. GATTAACCCGTTACGCTAACTCGTTAGGGCCT 114042 29 100.0 32 ............................. TGCCACTCTGATTTTGACAAGAGGGATAGTCA 114103 29 89.7 32 ..........................GGC AGACGGAACGGTAAGCGGCGAGGCTTGGCCCA 114164 29 96.6 32 .....A....................... ACCCATTTGTTGGTCGGGTCGCCATTGGGCAC 114225 29 100.0 32 ............................. CGGTCGGTGTAGGTGGTGCTGGTCATGGTTTT 114286 29 100.0 32 ............................. CTCGGCGGGGTGGAAAGCGCGAAGCTGGTCTT 114347 29 100.0 32 ............................. AGCGCCCTGGCATGCCATGGGATGTGGCGCTT 114408 29 100.0 32 ............................. GCCGCGTTCACGCTCTGGGGCAAGGCGTTTCT 114469 29 100.0 32 ............................. ATGTCGGACCAGAACGTGGCGCTTGCGTTCCG 114530 29 100.0 32 ............................. AAGTTGATGGACTGCGCAATGCCGCCGGGGCC 114591 29 100.0 32 ............................. TACTGAACCCCGCCGTTTACCCTTGCGATGGA 114652 29 100.0 32 ............................. GCCGCTACGGTGCCTTCAAAGCCCGCCGCCGT 114713 29 100.0 32 ............................. TCCACGCGGTTGGCGCTGATCGTGTTGTTGGC 114774 29 100.0 32 ............................. GCGGACTGCGTCATGGGGGTGCCATCCACCTC 114835 29 100.0 32 ............................. ACGAAGCGGGGGCGGTTCACGGGGCGTGGTCC 114896 29 100.0 32 ............................. CGATATGTTGGCTTACCCAACAAGCACGAAAC 114957 29 100.0 32 ............................. CGGCCTTCGGCAGGCGGGCTTCCACCCAGCCG 115018 29 100.0 32 ............................. CGCGAGGCGCTGATCCTTCTGTGGTGCCGCGT 115079 29 100.0 32 ............................. CTGGCGTCGTGCAGCGTCACAATCCGCTGGTT 115140 29 100.0 32 ............................. ACCGGGCAGTTGCTGGTGCGGGTGAACGACCT 115201 29 100.0 32 ............................. CAGGTCGCCAACCATCTCGGCGGCCCGTGTCA 115262 29 100.0 32 ............................. GCGGCAAAGCAGGTCCACCTGCACCTGGGCAG 115323 29 100.0 32 ............................. GTGGCGGTGAAGGTGCCCTCCGCCGCGTTGAA 115384 29 100.0 32 ............................. CTGGCGGACTGGTCCGCGGAGTTGACGCCGGT 115445 29 100.0 32 ............................. GTCGCGCGGCCCAGCGTGCCGGCATCCACCTG 115506 29 100.0 32 ............................. ATCGGCCTGCGCGGTTCGGTGCGGGTGCGCGC 115567 29 100.0 32 ............................. GTCGGGGTTCCGACGACCGTCGCCGCGACATT 115628 29 100.0 32 ............................. CTGGTGGGCCTGAGATGAGCGTCGATAGCTCC 115689 29 100.0 32 ............................. CGGCCGGAAGGCCTGCTGCTCATCACGACGAC 115750 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 66 29 99.8 32 GTGTTCCCCGCCCGCGCGGGGATGAGCCG # Left flank : TTCTCTCCGCCGGCGGTCTTCCCCTGCCGACAGCCACGTCCGAAGCGATGCCAATCGCCTTCGATGGCCCTGGAGGAACGGGCGATGCTGGTCATCGTGGTTGAGAATGCCCCACCGCGGCTGCGGGGGCGCCTGGCCGTCTGGCTGCTGGAGGTGCGCGCGGGCGTCTACATCGGCGACTATGGGCGTCGGGTGCGGGAGATGATCTGGGGCGATGTGACCGCCTATATCGAGGACGGCAACGCCGTCATGGCTTGGTCGGCACCCAACGAAATCGGTTTTCATTTCGACACCTGTGGCCGCAATCGACGGGTTCCGGCAGACTTCGACGGGATGCGCTTGGTCAGCTTCACCGCAGAGGCCGCCTTGCCAGCCGAACCCGGCCCAGCGTCCGCACCCCAGCGTCGCCGGGGGGGCGGGGGCACCTGAGAACAGGCGTTCTAACCGGTGCGTTCATTGACTGTTGAATCTGGCAGGATATTCAATTGCCTCTGTGAAGA # Right flank : GTAGGCCCCAGAAATGGCGGCGCCGCTTACTTCAACCTGCGATTCACGGCGCTACCTGGATAGAGGAAATTTCAGGTTGAACAACTGACTGGCGCAACGCTGGTGCGTTCGCGCACGCAGCTGATCGCTAGGCCCGGCCATCAAGGTCCTCGTCGCCGCGCTTACCGCCGATCCGCATCTGCCGTCAGGATGACGGCCTCACGCCAGATCTGGACAATCCGTAACAAACTGCCACACCATTAGAGCGCCCGAGGCTGCTTGGCCAAACCTGAAGCTGGCTCCTTCAAGCGTTCACGAGCAGGAATATTATATCATGTCGCTCATCTATGGTACGCCTGGATCAGACACACTGGTCGGCACCGGCGGGGATGACACGATCATCGGCGGAAGCGAAGACGCCCAAACCTACGCCACCGGCAATGACATGATTTCAGGCGGGGAGGGCAATGACCTCCTGTTCGGCGGCGACGGCGACGATGCCTTGTTCGGCAATTCAGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCCCGCGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCCGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //