Array 1 61666-60198 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWFN01000071.1 Vibrio cholerae strain CISM_300055 NODE_7_length_205182_cov_65.1195_ID_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 61665 28 100.0 32 ............................ TATTGAGCTAACGGCACTTGAATTAAGTGGGC 61605 28 100.0 32 ............................ TGAAGAGATATACGACGAGCTTTTTGTTTATG 61545 28 100.0 32 ............................ CAGTGGATATAGTAGGGATGTGCACATAAATA 61485 28 100.0 32 ............................ TTTTCAACTTGTGTCGCCGTAATCCACACGCC 61425 28 100.0 32 ............................ TGTATATGTGATTAGTAAAGGTCGTAGTGATT 61365 28 100.0 32 ............................ GGCAATATCTATAGACGCAGTGCAGCGCTCGG 61305 28 100.0 32 ............................ TAAACCCATTGAGGCGTGTAGCACTCGGCCAC 61245 28 100.0 32 ............................ AAAATGAGTTGCCCTTGCCCGCAACGGGGATC 61185 28 100.0 32 ............................ GTGCTGCGCCGAGTCTTGGTGATTTGTCTTGA 61125 28 100.0 32 ............................ GTAACAACAATCCCCGCACTAGTGATCGAGCC 61065 28 100.0 32 ............................ CCACGGAAGTTATCAATTAGCTCTATTCCTAC 61005 28 100.0 32 ............................ TGACTTGGCGCCAACAAACGCAAAGTTAGCGA 60945 28 100.0 32 ............................ ATTGAGTACCGCCCCCGTCCACGCAAGCAAGT 60885 28 100.0 32 ............................ TTCCGCACGACACATGCCGAGGAACATTTCTT 60825 28 100.0 32 ............................ ATAAAAATTCGCACTGCCAGATACTTGGATAC 60765 28 100.0 32 ............................ TTGGTACATTCACGGCCGCTATACAGTCCCCT 60705 28 100.0 32 ............................ GTCCTCACCAAATTGCATCGTAACCAAATACG 60645 28 100.0 32 ............................ TTGAACATTCTTACACAATCGTCATAACGAGT 60585 28 100.0 32 ............................ CTGCCCCGCTTTATCTGACTCACTAACAAAAT 60525 28 100.0 32 ............................ GTCACCAAATACTCAGACGCGCCAGCATGGAA 60465 28 100.0 32 ............................ AAGACTCTGCTTAGACGCAGAGCATCGGTCTA 60405 28 100.0 32 ............................ TGCAACAAACCGAGCGTGCAAGGCACATGGCC 60345 28 100.0 32 ............................ CCAATGATGTTGATTATTGATAGTGCCGTTGG 60285 28 100.0 32 ............................ CATAAATTCAAGTTGCCGCGCTTTGTCTGGTA 60225 28 89.3 0 ...........C.............TT. | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGTAACTTACGTAAGCTTTGTACGCAAGCATGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGTAAATCGCTGGTGGAATGTTTAGTGGATTTACAACAAAGCAAGCCGACAGCGTTGTGCTCCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGTTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCTCAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACTGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTAACCCTTTATTTTTGATCTTTAAAAATACGCTTTTAAAACAAATAGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATTG # Right flank : GAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTACGTATATTTATTAGGGTTTTCTTAAATGGTCTTTTCCCAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGTTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATCGTTGGTTGTGTTAATATCAAATCCAAGTATATCGATCGAACATGTCAGATGGTCTCGTAAGCCAAGTTTTACTCAGGGCGAGTTTTGCGTCAATAAAAATCCTTTTAGAATCATAACGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGTCCGCTCCACCAGCTCATCATTGGCTTTCTGCGTTCTAAGTAGTCAGTGCGGTTATAGGCGCTACGCACTTGGTTGTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //