Array 1 15529-12319 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUKO01000026.1 Clostridium sp. TF08-15 TF08-15.Scaf26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 15528 32 100.0 33 ................................ CTGCTGGACAGATGCATTACTAAGCAGAACATC 15463 32 100.0 36 ................................ GTCCGGTGTTGTTGCAATCGTAAAAGGTGCAGGATA 15395 32 100.0 34 ................................ ATAGTTGGATGACAGGTTTTCGGTGACTTTTTAA 15329 32 100.0 33 ................................ CTCCGGTACTTATGGCAACAACGGCCAATTATA 15264 32 100.0 33 ................................ AATACATCTCGTTGCAAAAGTATGTCTTAATAT 15199 32 100.0 35 ................................ ACATTTTGGCGTTGAGCAAGTAGCAACCACATTAC 15132 32 100.0 33 ................................ CAAGAATCACGGTAACCTTGTTACAACAGGAAC 15067 32 100.0 33 ................................ GTGCTCGTAGACACCCATAAAATAATCTTTACC 15002 32 100.0 34 ................................ TATGAAATCTGCACTGGGCGGCATAATATGCACC 14936 32 100.0 35 ................................ TATAAGATTGTCTGTCTCGTATTCGATCGGTTTGT 14869 32 100.0 33 ................................ TGAGACGGCTGCAGGTGGTGGCACCGGTAATAT 14804 32 100.0 33 ................................ TGAGCAGAGGCACTATTAAGCAAAACATCAATA 14739 32 100.0 34 ................................ GGGATCCGGAGTGTCCGCTTACATTTAACACGGT 14673 32 100.0 33 ................................ AACAGAATGCGACATCAAACTACCTCACTTTCT 14608 32 100.0 35 ................................ AGTTATATGTGGAACGGAATGTTCCAGGGAAAGTC 14541 32 100.0 35 ................................ CTTTTTCAGCATCTTTGAGCAGAAATGAAAATACT 14474 32 100.0 34 ................................ ATCCATCTCTCCCTGGCAATGATCAAAGCAGTTT 14408 32 100.0 34 ................................ TTCTGAAGCTCCTCCGATAATATCTTTTCCTCCA G [14407] 14341 32 100.0 36 ................................ ATGCAGTGTATTCCCGGAATGGGAGTACTGACAGGG 14273 32 100.0 33 ................................ ATTTACCTGATAGATGTTGATTCGGTCTTCGGA 14208 32 100.0 37 ................................ CTACCATGGCTTACACTACTGCTCTACGCGTGCGATC 14139 32 100.0 35 ................................ AAAAAGAGCAGGCAGAATGTTTATCTGCACAGGAA 14072 32 100.0 34 ................................ TTCTGTCGCCACAATACCGGATAAGTTGATATCT 14006 32 100.0 36 ................................ TTTGCATTTACGTTTGTTTTTGCACGATATTGCTTT 13938 32 100.0 35 ................................ AATTCCTTTTCTTGCTTGGATGGAATCGGCGGCTT 13871 32 100.0 32 ................................ GATTTTTGACACGTCGACGCCGATTGCCTTAG 13807 32 100.0 35 ................................ ATACATCCACATTTTCTGTCGCGCTTTGGGCGTAT 13740 32 100.0 34 ................................ CTTGTGACTTTTCTGCATCTCGTTAGTCTGCCAA 13674 32 100.0 34 ................................ ACAAAATCGTTAATATCGATTGCGTACTTGTCTG 13608 32 100.0 35 ................................ TAGATGTTGCTACGGGTAACAGCAAGACAGCAGAA 13541 32 100.0 33 ................................ TACGGTACTCAGAAGTTGCAGAAGCATATTACC 13476 32 96.9 33 A............................... TACGGTACTCAGAAGTTGCAGAAGCATATTACC 13411 32 96.9 33 A............................... ACACAATACTGTGGATAATCGTCCGGTACTGCG 13346 32 100.0 35 ................................ CTGCGCAATGAATAAAATATTTTGCCCCGTTGTAC 13279 32 100.0 34 ................................ TACCGGGGTAGCGTAAATGGCGTGCAAGCCAATT 13213 32 100.0 34 ................................ ATGTCAATACAGCGTGTGCTGCGAAGAGCTTTCC 13147 32 100.0 34 ................................ CGGTTTCCGGCTGTACCTTAGTTGCAGCATCGGC 13081 32 100.0 34 ................................ GATGCTATCACCGAAGAGGTTTCCGGAGCCGGTG 13015 32 100.0 34 ................................ ATGTATGAGCCGGTATTTATCAAGACACAGGCAA 12949 32 100.0 33 ................................ CCTGGAGTTAAAGAGCAGCTGTGCCTCATCTAT 12884 32 100.0 34 ................................ AAAGTAAGCCTTGACTGGTTAGTAACTGGAAAAG 12818 32 100.0 35 ................................ TCCGGAAAATAAAGGTAAATCGTCCGGGTCAGGAC 12751 32 100.0 34 ................................ ATCAAATTCACATCAACGCATCTGTCCAACTGCG 12685 32 100.0 35 ................................ CGCGGGGTTCCAATAGAGGTCTAACTTGCTTACGC 12618 32 100.0 34 ................................ GCTTCCAAGATCTAAGTACTGTATGGATGAGGCT 12552 32 100.0 35 ................................ ATCTGATGTTAGACTGCGGACTCCGGCGTCAGGAA 12485 32 100.0 35 ................................ ATTTCTGTCTTCATCCGGACTGCCTCCAATCTGTT 12418 32 93.8 36 .............C.......C.......... GCACGGACGATGGGGATAATCTGTTTTTTCAACATG 12350 32 84.4 0 ...........T.C.......ACC........ | ========== ====== ====== ====== ================================ ===================================== ================== 49 32 99.4 34 GTCGCTCCCCTCGTGGGAGCGTGGATTGAAAT # Left flank : GGTTATCCTGCATTCCTGTGGAAGTGAGGTGCGATATGTTAGTATTGATCACATACGATGTCAACACAGAAAATGCGACCGGAAAAGCGAGATTACGCAAAGTGGCAAAACAATGCGTTAATTATGGCAGAAGAGTTCAGAATTCTGTGTTTGAATGTATTTTGGATAATGCTCAGAGCATTGCATTGAAGGCAACACTTGAGGATATTATTGATACAGAAAAGGACAGTCTTCGATTCTACTATCTGGGTAATAAATATCAGACCAAGATTGAACATATCGGGGTAGACAGAGGAATCGCCCCGGATCAGACACTGATTTTGTAACTGATGCGAAAGCCAAGCATACATAAAATGCCTGGGGGATTCGCACCTTATAAATTATGCGATTTATTGAAATAACATACAAAGATATTTTTAATTAAAATAATTTGTTGTTAAGATTAAATATTTTAGACAATTTTTGCTGAGAGAAAAGAGAACTTTTTGGCGAAAATTGCT # Right flank : AGAAAAGACAATCGTATATCATGTACTATGTGATTACATAGAAGGAGGATATCTAATTGAGTAAGACGGTTAGGCAAAGTGATTGGGCAACGGAAACGCATATGGAAGCCCTATTTTGGAGAAACGGAATGACACCGGAAGAATACGAGATGGAAAACAGATATTTGAGTAAAAATTTTTATAAGCAAAAAGATGGAAACTATATGCCACTTTGGATGCAAGAAGAGAACATGAAAGCATAATTAGTTCTTTGGATTTTTTTATTTACAGACAAGAAATACTTTATATTGAAATCAAAACAGATTGTAATAATTTCTTATACTATTCTATTTTATGTCTGATATTGTACAACATGTTGATAATTACAATATCTTTTAAAGTCAGTTTTAAGAAAATCTATTTATATTTCCTACGTAACAATTTGAATTTTTAATGTTATGTCGCATGGCTTTGTGTAAATTTGTGTATTTCGCTATTGATTTTGTGTAAGATTGTGTATA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCGTGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-5.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //