Array 1 5866-4996 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLCN01000583.1 Acinetobacter baumannii strain ABBL007 contig-5000053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 5865 30 96.7 30 .............................A CGAAAACAAAAGATACTCATGCACCAGAGA 5805 30 90.0 30 ...............T............AA CAGCATTTACACCAGCAACCTTTAAAGCAG 5745 30 96.7 30 .............................G TTACATGCCCAATTGGTTGGCGCATGTCAT 5685 30 100.0 30 .............................. CTAAGCGAAGGCTAACGCTCACATTCAAAA 5625 30 96.7 30 .............................G TAAAACCGAATCCCAAGCTGAATAGGTTTT 5565 30 100.0 30 .............................. GTTGCGGCTCTCGCATGATGTGGTTTGATC 5505 30 93.3 30 ............................AA CTGAAAAGATGTTGAGTGCAGGTTGTTCTT 5445 30 100.0 30 .............................. GATGCTGAAAACTTCACAGCAGGCAATCCA 5385 30 96.7 30 .............................G TAAAGGATGTGAGGAACGTCGTGAGTGGAT 5325 30 93.3 30 ............................AA CTGACTAGTGATTTGAGGAATGTGCTCACC 5265 30 93.3 30 ............................CA AACACAGCATTATTGGGCCTTCAATACGAT 5205 30 93.3 30 ............................GA TGCAGGCGGAGTCTGCTATGCGACTGGTAC 5145 30 90.0 30 .................T..........AA ATAACCACGGTTATGGTAAGTCACTTTTAC 5085 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 5025 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== ============================== ================== 15 30 92.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : | # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAATAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1049-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLCN01000107.1 Acinetobacter baumannii strain ABBL007 contig-1000062, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 1048 30 93.3 30 ............................GA CTCATATGGATGAAATAAAGCAGCAGCAGA 988 30 93.3 30 ............................TC CCCAATAGACTGAACTGTCGAAACGCTTAT 928 30 93.3 30 ............................GA GCTTTGTAATAAAACAAGATGTAATCGGTG 868 30 93.3 30 ............................CA TGGTTTTTCCCCTTTATTTGAGCAATCGAC 808 30 96.7 30 .............................A AGGCTTTGCTTATCGATGCGGATGCCGGTG 748 30 96.7 30 ............................T. TACGTCAAATTACTTCTTATTGTAGTTGGG 688 30 93.3 30 ............................TT CATCATCAAATAAATCTTCGTATTTAGTGA 628 30 96.7 30 ............................T. CTGCTTGAACAACATGAATTGCCCATTCAG 568 30 96.7 30 .............................A AAATATTGATACGATGGATTAACAACAGAA 508 30 100.0 30 .............................. AAGCGTCATGAATATTTGGTTTGGCTTGAA 448 30 96.7 30 ............................T. ATCATTAGTGCCTCTTCGGAAATCAACTTT 388 30 96.7 30 .............................A AGAGTATGTATTAGAGGGCTATGCACTTAC 328 30 96.7 30 ............................T. AAAATAATTAAATGGTCTATCACCGTCTTC 268 30 100.0 30 .............................. TAGATGCAGCACACAGCAATCAGGGCGCTC 208 30 100.0 30 .............................. CGCGGAAGAGCATTCGGGTGAGTTGGATTA 148 30 100.0 30 .............................. GCAAAAGGAACGGCTGGCTAACGCCACTAT 88 30 96.7 30 .............................C ATTCCAGCAAACAACAGTGTAGATCCAATT 28 28 93.3 0 ............................-- | ========== ====== ====== ====== ============================== ============================== ================== 18 30 96.3 30 GTTCATGGCGGCATACGCCATTTAGAAAAG # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACTAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : A # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //