Array 1 18977-15589 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZGU010000040.1 Shewanella algae strain A97 A97_40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 18976 28 100.0 32 ............................ ATCCACATAACAGGCGACAGCCCGCTAGAAGA 18916 28 100.0 32 ............................ GACCAGAAACCGCCGCCGGGGCGGTTTTTTAC 18856 28 100.0 32 ............................ TCATTACCGTAGATCACGCCACCGGAAATAAA 18796 28 100.0 32 ............................ TTTTGTATTGGCTACGCCCTCAGCGCATTGAC 18736 28 100.0 32 ............................ TATATGCTTTGGTCTCAGGGAATTGATGTTCG 18676 28 100.0 32 ............................ ACCTGAGCCGAACCCGAAATTCACACTCCCGC 18616 28 100.0 32 ............................ ACCACCCTATGAGGAAGAAAGTAGGCAAAGTC 18556 28 100.0 32 ............................ TCGGGCTGCCGATATTCTCGACGGCTTCGATT 18496 28 100.0 32 ............................ TTCGTCGTAGGGGTCGTTAAGCTCATACGCTT 18436 28 100.0 32 ............................ GAACGCCGCGAGAAGGACGAAAAGTTCGTCTA 18376 28 100.0 32 ............................ AATTAGGCGCCCCCACTCGATAAGCGGGGATA 18316 28 100.0 32 ............................ TGCCCCGGGCATTCGCTGGTATACGGGTATAC 18256 28 100.0 32 ............................ GTACGTGCTAGATACCCGGGTCGCCGGAAACC 18196 28 100.0 32 ............................ ACCACCCTATGAGGAAGAAAGTAGGCAAAGTC 18136 28 100.0 32 ............................ ATAAGGAAGAAACCGGCGACCACCACCCTATG 18076 28 100.0 32 ............................ TGACTCGATAGTCGAGTAGTAAGCGGGTTCGA 18016 28 100.0 32 ............................ TGCCATTGCTGGTCTAAAAGATTTGGACGATC 17956 28 100.0 32 ............................ ACCTGTCCCCGGCCGCGGCCAATTAGCTTGAA 17896 28 100.0 32 ............................ TGTAGGCCTGGCCTGGTTCTCACCTGACTGCA 17836 28 100.0 32 ............................ ATCAACCATGCCAGCGCCCTGGCTGAACAGTT 17776 28 100.0 32 ............................ ATCAAAAACAAACCAGGGCAAACAATAGTTAC 17716 28 100.0 32 ............................ GCCTAAGTCCCCGATATTCGCGGTCAATGCTT 17656 28 100.0 32 ............................ AAAGCGCGTAGGTAGCCTGAAGGGCGCGAGGC 17596 28 100.0 32 ............................ AAGCGCGGCTACAATATCGAAGGCCTCCTCCC 17536 28 100.0 32 ............................ TTTGGCGGACGTATGCCTGCTTCTGCGGCCTC 17476 28 100.0 32 ............................ GGAACGTGCCCTGTAGGGGGCGACTTTTGCAT 17416 28 100.0 32 ............................ ATCCTGCCTGAGCTTTTCGCGACTGATGTAGC 17356 28 100.0 32 ............................ TACCTGCTCGATGGCGAAGTGTCGGCGCTCAC 17296 28 100.0 32 ............................ AAACCAAATCCACATAGGCCGCTTACGGCCAA 17236 28 100.0 32 ............................ TCCTGACCATTGGTGACAATAATCTCAGCCTT 17176 28 100.0 32 ............................ TGAGGCACCTGGAACTGATTAGGGAGATTAAA 17116 28 100.0 32 ............................ TGATAACCTCTTGCGGGGTCAACGGGGCTGGC 17056 28 100.0 32 ............................ AACTGCAGGAGTTTATGGGGTATTCAATGGTG 16996 28 100.0 32 ............................ GCCGCTAAGGTGATGGGCTACTCGGTAAAAGA 16936 28 100.0 32 ............................ GTTGAACTCATAAAATATCTTCTCGCAGCACA 16876 28 100.0 32 ............................ AGCAGATGACATACCTATGCCAGCAGATAGCA 16816 28 100.0 32 ............................ GCTGGGGAAGAATGCGAATACAAATTGTGGAG 16756 28 100.0 32 ............................ TTATTACCCTCGCCTGGATGGCTTTTGCCATT 16696 28 100.0 32 ............................ AGTCAGGCGTTGTCACATCAGCTCAGCTTGAC 16636 28 100.0 32 ............................ GCCGCTAAGGTGATGGGCTACTCGGTAAAAGA 16576 28 100.0 32 ............................ ATACCCAGCTGGATAGATTTAACTGACATGCC 16516 28 100.0 32 ............................ AGAGAGCTTGCTCATGAACGTAGAACAAAGGG 16456 28 100.0 32 ............................ TTGTTGCTCACTATGTTTTTCAGCGCCCGAGT 16396 28 100.0 32 ............................ GAAACCGCTCTTCTACTTCATGGACAAACAGC 16336 28 100.0 32 ............................ TACGAACCCGGAAATCCTGCACGCCTTGCATA 16276 28 100.0 32 ............................ AACCACAGGCAAAGCAGTAGATAGTGCCAAAC 16216 28 100.0 32 ............................ AGATATTACCGATTGGCTCAGTAATGGCTGCT 16156 28 100.0 32 ............................ ATCCATTATGCCAGCACCAGAGAAAAGCGACC 16096 28 96.4 32 ..................G......... GTTTAGCCCGGCGGCTATGTCTGACCAGATAT 16036 28 100.0 32 ............................ GACATAACGATGCAGCACGCCTTGCGCCGTCC 15976 28 100.0 32 ............................ TGAGATGTTTGATGTTGCTTCGTTTGATGACA 15916 28 100.0 32 ............................ TTCCATACCCGTAAATTGTGACACGACATGAA 15856 28 100.0 32 ............................ TATGGATGCTGTAGCGCATATAGCAGCAGATA 15796 28 100.0 32 ............................ GATTACGACAGCCTGTTGTTTGATGATAACAA 15736 28 100.0 32 ............................ GACAATGACGAACTCGAACCACCAAGGCGCGC 15676 28 92.9 32 .............T..A........... AGCGAGGGATTTTAAATCCCTTTTTCAATACA 15616 28 92.9 0 ............T........G...... | ========== ====== ====== ====== ============================ ================================ ================== 57 28 99.7 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTCAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATTGAAAGATATCCGCAAAGCACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTAAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGCTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGATTTATTCTATT # Right flank : GGTTTTCTGGTGAATTACCCTTGAGCCTTGCCGTGCTCCCTCCACAACGGGGATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCATCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTAGCTAACCGCGACTCTTTGGCTGCAGGCGACCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //