Array 1 1-1523 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFT01000250.1 Acinetobacter baumannii strain ABBL067h contig-37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 61 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 121 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 181 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 241 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 301 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 361 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 421 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 481 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 541 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 601 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 661 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 721 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 781 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 841 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 901 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 961 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 1021 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1081 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1141 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1201 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1261 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1321 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1376 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1436 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1497 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.8 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 88-955 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFT01000410.1 Acinetobacter baumannii strain ABBL067h contig-6000070, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 88 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 148 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 208 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 268 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 328 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 388 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 448 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 508 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 568 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 628 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 688 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 748 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 808 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 868 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 928 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 15 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : ATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTAG # Right flank : AA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 509-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFT01000476.1 Acinetobacter baumannii strain ABBL067h contig-9000058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 508 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 448 29 96.6 31 ............................T GCAGCTACTCGACATGTTGGTAGGGCAGATG 388 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 328 29 100.0 31 ............................. GATTGAGGCGATTTTTATCGCGGACATTGCC 268 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 208 29 96.6 31 ............................T CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 148 29 93.1 31 A...........................T TATTATTAAACGGGAAAAGTATATTCTTGCT 88 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 28 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= =============================== ================== 9 29 97.3 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : A # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3814-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFT01000063.1 Acinetobacter baumannii strain ABBL067h contig-1000057, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3813 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 3753 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 3693 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 3633 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 3573 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 3513 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 3453 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 3393 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 3333 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 3273 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 3213 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 3153 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 3093 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 3033 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 2973 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 2913 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 2853 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 2791 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 2731 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 2671 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 2611 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 2551 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 2491 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 2431 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 2371 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 2311 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 2251 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 2191 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 2131 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 2071 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 2011 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 1951 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 1891 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 1831 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 1771 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 1711 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 1651 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 1591 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 1531 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 1471 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 1411 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 1351 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 1291 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 1231 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 1171 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 1111 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 1051 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 991 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 931 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 871 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 811 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 751 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 691 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 631 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 571 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 511 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 451 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 391 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 331 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 271 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 211 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 151 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 91 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 31 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 64 28 95.0 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AATA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //