Array 1 208220-209896 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAQV010000004.1 Bombella apis strain MRM1 seq4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 208220 29 100.0 32 ............................. TCGTTGCGGCACTGAAGAATCAGGTTACCCTA 208281 29 100.0 32 ............................. GCATCCCACGTTGCCCTGTTGGCATGAGGCGG 208342 29 100.0 32 ............................. CTAGCCGACCTTGCCCCTGATCCAAAAGAAAG 208403 29 100.0 32 ............................. TAGGTTTTGCCATCCGGGGCCAGGGTCGGGAC 208464 29 100.0 32 ............................. TACATCCCCACAGTGGACTCTCATTACGGCAA 208525 29 100.0 32 ............................. AGCCAGAACCCACTTCGCTTCGGTTTCACCTT 208586 29 100.0 32 ............................. CTGTTATCACCACCGTGGACGTGGACCTCCAG 208647 29 100.0 32 ............................. CATGCAGGTACTGGGAGACGCTGGAAGTGGGG 208708 29 100.0 32 ............................. CTGACTTTCCCATCGTCAGACCATTCCGGCTG 208769 29 100.0 32 ............................. GCGATAGCACGACAGTGACCCCGGAGGGCTAC 208830 29 100.0 32 ............................. GACACGCCTGATCAGATCTGCGATAGACCGCC 208891 29 100.0 32 ............................. ATCATCGGCTTCATCGGGTTCTGTGTGTTGAA 208952 29 100.0 32 ............................. TCGCCATTCAGAACACTGGCTGCCGGGGAGTT 209013 29 100.0 32 ............................. AGCGGGCCGCCAGAGACCGGGAGAACCAGCGG 209074 29 100.0 32 ............................. TACGACTTCATATTTTAATTTTTCCATTGACT 209135 29 100.0 32 ............................. TTTGCATATATCATGCACATATGAGCAAAATC 209196 29 100.0 32 ............................. GCGAGCGAGGCCGAGCCATCAGGGAAAATCGG 209257 29 100.0 32 ............................. CCGCCCATGCTCTCCCGCTCGTATTCCTCGTC 209318 29 100.0 32 ............................. CGGGGCGGTGGCGTGACCTCGCACTGGCGACT 209379 29 100.0 32 ............................. GGGGTCAAATTTCGGCTCCCGGGCGTCAAAAA 209440 29 100.0 32 ............................. ACAGGTCCTTACAAATAACCTTGTTCACGATA 209501 29 100.0 32 ............................. AAACAGCCCCCAGCCCCGCCTCCACCTCAAAA 209562 29 100.0 32 ............................. GGGGCAGAGTTGGGTCTGGCCCCCATGCAGAG 209623 29 100.0 32 ............................. AGGCTGACCGCATTGCCTGCTCCCGTGCCGAA 209684 29 100.0 32 ............................. TTGTGCAGGGACGGCTCGAGGTCTGAAAAGAC 209745 29 100.0 32 ............................. CGGCGATCAGGTACCGGGATCGTGACGAAAGA 209806 29 100.0 32 ............................. GTGCGTAGTGTCTGACTGTTTCACGATAGATG 209867 29 93.1 0 ......................CA..... | T [209894] ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.8 32 CTGTTCCCCGCCTACGCGGGGATGAACCG # Left flank : TCGTGTACTGCATGGCCCTCCTGCTGGAGCTGCTGCGGGGCAGGAATGAAAAAGGCGAGAAAATTGCGCTTCAGGAGCCGTTCCTGACGGCAGAACAGTTGAACATTGCTGCTTCTGATGATTTTGAGGCTTCCATCGGTCTGCCTGCTTTCGACAGCTGGCGTGATCTTCTGACTCCAGAGATTAAGCAGGAGATTGTGCGTGATCGGGAGCTGATCCGTCAGAAGGGTGTTCTGGCCAGCCTGCCCGTGTGATGAGGCGATGAGCCGTTGAAAATTGATTGTGTGTAGAGAAAGGGAGGCTCCGGCCTCCCTTTTTCATGTTTGCTGTCAATCTTGTGGATAAAATTTTCTGGAGTGGTTTTTGGCTGTTCAGCGTCTCAACTTTCTTCTGTAAGGGCCGGAGAGGACTTGCCTCGGCGAGGTCATTAAAATTATATTTAATTCGGTAAGTTCTTTGACAATTAAAAAAGACTTATAATACAAATTGTTACATGAAGT # Right flank : GGTGCCAGACCGCCATCACTGGCCTGTACCGAACTGTTCGCCGGTGGGTCATGGGGTGGTTGGTGGCATATGTGGTCGCCAGAGCCATTCCAGAGCTTCGGGAAGGGTCTGTTCGATGGTGGGGCCATCCACATGCCGGGCATTGCGGGCAAAGACAAATTGGTAATCATAGCCCTTGTCGGCCAGCACGCGGGCCATGTTTTCCCCAGCCAGCACCCAGTCATGCATGCCATCAGGCATGGACGGAACGGGGTAGAACAGGTCCTGGTCGCCTACTTCGTACCAGATGTGCAGCGGGGCCAGTGGTGCCGCCGGGATGAGCGCCGCACCGGGATGGGGTGGTACGGCTTCCGGTGTTCCGGCCCATGGGGAGTGAAGCTGCCATCCCCCGCCGGGCAGGGCGGGGTCGTGCGGCCATTGCTGGTTGACCAGCGAAGGAGAGTAGGCCAGCACCCGGTGATAGAGGTTGGGCCGGAACCAGGCCATGGCAAAGGCCGCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCTACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //