Array 1 113242-114368 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNLZ01000015.1 Pseudomonas aeruginosa isolate PSA-3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 113242 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 113303 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 113364 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 113425 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 113486 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 113547 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 113608 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 113669 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 113730 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 113791 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 113852 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 113913 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 113974 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 114035 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 114096 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 114157 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 114218 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 114279 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 114340 28 79.3 0 A..........A..C..-.....A....T | C [114344] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 123541-125279 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNLZ01000015.1 Pseudomonas aeruginosa isolate PSA-3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 123541 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 123602 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 123663 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 123725 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 123786 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 123847 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 123908 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 123969 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 124030 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 124091 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 124152 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 124213 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 124274 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 124335 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 124396 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 124457 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 124518 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 124580 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 124641 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 124702 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 124763 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 124824 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 124885 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 124946 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 125007 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 125068 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 125129 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 125190 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 125251 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //