Array 1 233312-233698 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFN010000002.1 Deinococcus budaensis strain DSM 101791 Ga0416733_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 233312 37 100.0 33 ..................................... CACCTCGGCAGCCGACCATTGCCGGGTGTCGGT 233382 37 97.3 33 ..........C.......................... TGGCGCAGGCTGTCCGGCAGGGCATCGTTCGTG 233452 37 100.0 35 ..................................... CAGCATGGTCCCGTCTCCCTGGTCCGCGATGCCCT 233524 37 100.0 33 ..................................... TGGACCGGGACCGACACTGGACGCCCCACCCGC 233594 37 100.0 31 ..................................... AGCCTGGAGATGCCCGCTGTGGAGATCAGCG 233662 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 6 37 99.5 33 GTTGCAGCCTGCTTTCGGGTGGGCTGAGGATTGAAAC # Left flank : AAGCGCTGGCCGGTGCCCACGCCGCCGTGCTCGGGGTCGTTGCCGCTCTCGTAGGCCATCAGCTTGGCACGGGTGGCCTTTTTCGGCCCCAGCAGCGCGCTGACCAGCACGGCCAGAATGCCGATGCCCAGGGCGATGACCAGCATGATCACGAAATTCGCGTACTCGATAGGAGTCTCCCTTCCGCCCGCTCCTCTTCTCCTCTGCTCGTGAAAAATCGCACGAAGTCATCGAAAAAAGAGAGTGGGCCTGACGAACTGAAACCTAAACCGACTTGTGGTACGCCTCATGTTCTAGCACGAAAACCGCGTTCAGATCGTGCGCGAACCCCACGTGGCGGCCGGATGAGACGACGTTCGCGCGATCCGCAAACGGACGTTCAGAAACCTCAATTTCGCCCACCGCGCCACCCACCGAGGGGAGCTGCCGGTCTGCTCGCCCGGACGTTCGCGTTTCGGCCCCCGGAGCTTGCCGCTGGGACGCCTGGAGGCGACACTCCC # Right flank : CGACCGCGACGGCGACGGAGTGGCAGGCGAATGCCAGCTGCGGCACCCACTCACCAGCAGCGTGCCCGGATACGTCCCCGGTTGGCCCCAGTACGGCCCACAGGGAGGCAGGCTGCGCGGCTCGCTCCTCCCCTAACTCAGCAGTTCCACGAAGTCGTCGTCGTCGTTGTCCTGCGCCAGCGGCAGGGTCAGGGTGAAGGCGGCGCCCTGGCCGCGCTCGGACTCGACCCAGATGCGCCCGCCGTGTTCCTCGACCGCCAGCTTGCAAAACGCCAGACCCATGCCGGTGTCGAAGCGGCCATGCAGGGTCAGGCGCGACTGCTCGAAGGCGGCGAACAGGTTGGGGATGTCCTCGGTGGGGATGCCCTCGCCGTCGTCGCGGACCCGGAGGTGGGTGGCGCCCTCCGTCTGCCAGACCTCGACCGAGATCAGGCCGCCCGTGACGGTGTGCTTCATGGCATTGCTGATCAGGTTCGCCAGCACCCGGCGCAGGATTTCCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCTGCTTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.10,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : NA // Array 1 179890-180622 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFN010000004.1 Deinococcus budaensis strain DSM 101791 Ga0416733_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 179890 37 100.0 35 ..................................... TTTGATGGTTGCCTCTCCGCTATAGCAATGACGAC 179962 37 100.0 36 ..................................... TCGGCGCTGAAGGTGTCGAACTGCACGCCCCGGTTG 180035 37 100.0 37 ..................................... GTCGCTATGCCGAGACGGCGGGCTTTCATCTGGCCGC 180109 37 100.0 34 ..................................... CATCCGTACATCGGCGGTGGCATTGAAGTCCTGC 180180 37 100.0 35 ..................................... ACGCCTCTGATATCGGGCCGATAGACCCCGACAGC 180252 37 100.0 34 ..................................... CGTGTGTGTCTGGCGCGGCCGCGAGTACGAACAC 180323 37 97.3 31 .................G................... GCTCTGCCCTCCTACACCCCGCCTGAGGGCG 180391 37 97.3 31 .................G................... CGCAAGTAGCCCGCGCCCTTCATGTCCCAGG 180459 37 97.3 32 .................G................... CTCGGAGCCGTCCCAGGCCAGCAGCGCGGCGG 180528 37 97.3 21 .................G................... CAGGTGCAGGTGGGGGCCGGT Deletion [180586] 180586 37 97.3 0 .................................C... | ========== ====== ====== ====== ===================================== ===================================== ================== 11 37 98.8 33 GTTGCAGCCGTCTTTCGAGGCGGCTGAGGATTGAAAC # Left flank : TGCGCCACGAACTCGCCCCGCAGGGCATCGGCCTGAGCGTGGTGCACCCGGGCGGCGTGAGGACCGGCATCGCCCGCAACGCCCGGATCGGCCAGGGCGTGCCTGCGGGCGAGGTCGCCGCTGCCCAGCGCGACTTCGAGCGGCTGCTGAGGCTCGACCCCGCCGAGGCCGCCCGGCTGATCCTGCGCGGTGTGGAGACCCGCGCCCCCCGCGTGATCGTCGGCCCGGACGCGCGGGTGCTCGACCTGCTCGCGCGCCTGCTGCCGGGCACCTACTGGCCGGTCGTGCAGACGCTGATGCGGGTGCAGCGCTGAGCGCAGGCCAGCACCCCCCGGCGCGAACCCCGCGTGACGAAAGAAGCTGGGGAGGTTCGCGCCGCCCGAGAAATCTGCCTAGGACGCAGCAGCTGGAGCTGTGGCGGCGCCTGGCTGGACACCACCTGCCGGGTTCGCGCAGAATGCGAGACGGAACGCGTGCTGGACGACCTCTGGCACACGAAC # Right flank : CTACACCAAGCAGGAGCATGCCAAAGACGGCCTGGTTGCAGCCGCCCTTCAAGGACCGGGCCGGTAACTCCCCGGTAACGCTGACGGCCTAGGGTACGGCTGACGGGCCGAGGTGCCCCGCGACGCCGCGCTCTGGCGGTAGCGGCTGGCCCGTCAGGGGGTGTCTATGAGCACCGCACGTTGGATTGATCTGGTGATGGGCCTGCTCTTCGTGGTGCTGGGCGTCTGGGGACTGGTTCCGGCAGCGGGCGGAATGATTCTGGGCGTCTTGCCCATGACCACCGGCCTGAGCATCGCGGCCCTGATCGCGGGCGCGGTCTTGCTGTTCGGCACGGTCTCGACGGAAGTCGCCCACGGCAGCGCGGCCCTGATGAGCGTCACGTTCGCGCTGGTGGCGCTGCTGGGTCTGGTCTCGCCGACCCTCTTTGGCCTGACCGTGCTCAACGGCTGGTCCATCGGCCTGCTGGCGGTCTCGGCGGCGCTGCTGTTCTACGACTGGC # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCTTTCGAGGCGGCTGAGGATTGAAAC # Alternate repeat : GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 11480-11300 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFN010000010.1 Deinococcus budaensis strain DSM 101791 Ga0416733_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 11479 37 100.0 35 ..................................... ACGACCCTGGCCCGGACTTTTGACAGGCTTCGCCC 11407 37 100.0 34 ..................................... CTCCTCCAGTCCCCACGCCTCATCAGGCCGCAGA 11336 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 100.0 35 GTTGCAGCCTGCCTTCGGGTGGGCTGGGGATTGAAAC # Left flank : GCGGTGGTTGTCGGCCTTCACCCCCCGATTGTAGAAGCCGGCGCGGCGAGAGGCCGCCTGGGGCCGCGCCGCCTAGCCACCGACGGGCCAGATCACCTCGTTGAGCGGACGTTCTTCCCCGGATCCCCCGGCCAGTGCCCCCGGGGTCGGGGGCCATCCTGCACCCAGGATCAGCAGCACCAGCAACACCCATTTGCCCATCGCACCCTCCATGCCAGGCACGGAAAAATCCGCCCTGGGACGCTGTGAACGCGACCGCCGCGTTCTGGGCCGGAGCATGGGGGGCCAGCCCGACACCTCATGTCGGCGTCGGGAACGTGCGCGAAGGCCCGGCGACCTGAACTTCGCCGGGCGATCCGCGCGAGGCGCCAAAGGCTGTTTTGCGCGGCAAAAGCCTTGAGGCGAGGCCGCAGGTGGTGAGGGCCGCGCCCCCGTCAGCGAGTGGGTTCGCGCCTCGCGGCCATCAGGTTGCGTGCCACACGCGAAACAAGCACACTACC # Right flank : CTGCGGCGCTCGGGCATACGGCTGGGCAGCATCAAGGTTGCAGCCTGCCTTCGGGTGGGGATTGAAACTCCTCAGGGTGGGCTTTGACCTCGCTGGGGCTGCTTGTTCCGGAGGCACCCACCCGCGCCTCCCTCCCCCCCATCCCGTACACTGGCGGAGTTGCCGCGCCGCACCGGAAGCCGAGCGCGGAAAGAGGTGGAGTATGGGCCTGGGAATTGGAATCGTTGGCTTGCCCAACGTCGGAAAAAGCACGCTGTTCAACGCCATCACGCGCGCGGGGGCGCTCGCCGCGAACTATCCTTTCGCCACCATCGAACCCAACGTGGGGCGGGTCACGGTGCCCGACGAGCGCCTCACGGCCCTGGCCAGGGTCTTTACCAAGGGCGAGCGGGTGCCGCCGATCATCCCCACCTTCGTCGAGTTCGTGGACATCGCCGGGCTGGTCAAGGGCGCCTCGCAGGGTGAGGGCCTGGGCAACCAGTTTCTCGCCAACATCCGCG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCTGCCTTCGGGTGGGCTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 2 22760-24019 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFN010000010.1 Deinococcus budaensis strain DSM 101791 Ga0416733_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 22760 37 100.0 34 ..................................... CGCCCGCCCGCTGCCTCAGCCCCTGCGGCACGGC 22831 37 100.0 34 ..................................... ATCCAGCGCCGCCTCGGTCACCGTCACGTTCTGG 22902 37 100.0 36 ..................................... GCGGCGGCGGCCCACATCCGCGCAACGCTCTACCGG 22975 37 100.0 34 ..................................... ACCCCGATGACCCGAAATACGCTGTCATCGAAGG 23046 37 100.0 36 ..................................... CTGCGCCTTGAACAGCATCTGATAGATGCTCTCCAC 23119 37 100.0 35 ..................................... TCAGGCATCAGCCCCTCGAAATAAGGCATAAATCA 23191 37 100.0 36 ..................................... CAGTCCATGCCGGGCGCGGTGGTCGGCTGGGACGTG 23264 37 100.0 34 ..................................... AAGGGGAACCGGGTGCTGGAAACTGACCGTCACC 23335 37 100.0 34 ..................................... TGGGCGCCGCCCACAGCCACGGGCGCGCGGCTGG 23406 37 100.0 32 ..................................... TACACCCTGACCCCGGCCCGGCCCGTGCTCAC 23475 37 100.0 36 ..................................... AGCTCTTCCTGAATGGCGAGGTTGTAGGCCGTCGCG 23548 37 100.0 34 ..................................... CGGCGTGAGTGTGGACGGTGCGAACGGGGCTGCC 23619 37 100.0 36 ..................................... AACACCTACGACCAGAACATCGAGAGCAGGCCCAGC 23692 37 100.0 35 ..................................... CTGAATGACACGCTGCTGAAAGAGATCATCGGCCC 23764 37 100.0 37 ..................................... GACGCGCAGCATGGGGGCCGTGGGGCCGATGCCCTCC 23838 37 100.0 36 ..................................... GTCGAGCGCCGCATAAAACTGCGCGTCCGTCATGCT 23911 37 100.0 35 ..................................... AACCCCAGCTACGCGCCCGGCAGTCCCCGCGCGCG 23983 37 94.6 0 ..........................G........G. | ========== ====== ====== ====== ===================================== ===================================== ================== 18 37 99.7 35 GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Left flank : GCGACCGGCCCCACTACCCGCCCTACCTGCACCGATGATCGACCTGCTGATCTGTTACGACGTGAACACCGAGACCAGCGCCGGACGCAAACGCCTGCGCCGCGTCGCCAAAGTCTGCGTGGCGCACGGCCAGCGCGTGCAAAACAGTGTCTTCGAAGTCAGCGTCAATGACGTGCAACTGCTCGCCCTGCGCGACCAACTGCTGCGGGAAATGGACCCGTCGGAAGACAGCGTCCGCATCTACCGCTTACGTCAACCGCGTGACAAGTTCGTGGAGGCCTTCGGGCGTGACGGGTACCGCGACCTCAGCGCGCCGCTGATCTTGTAAGGGCCGCGCGAACCTGTCGTGACGGACTGAAGCCGGGGGGTCCGCGTTGCCGAAAAATTCCTGCCCAGACGCGGGAGACGCCCCTCTGCCAAGGCGTCCTTCTGGAGGCGGAACAGGGGTTCGCGCATAATCTGGGGCGAAACACGCGCCAGACAGTTCTGACGCGCGAACC # Right flank : CGTCATGTCGGGGCGCCCACCCGTGTTAGCCTCCTTCCCGTGATCCCACAATGACCCTCGCCGTAATTGCCGTCGGCCTGCTCGCCGGGGTGCTGGGCGCGATCCTGGGCCTGGGCGGGGGCGTGGTGGTCGTGCCTGCGCTGGAATTCGTGCTGCCGCTCTTCGGGCGCGAGATCAGCATCAGCCAGGCGGTGGCGGTGTCGCAGATCGGGGTGCTGGCGGTGGGCCTCAGCGGGGCAGCCAGCTACCTGCAACAGGGGCTGGTGCGGGCGCGGACGGGCTACCTGCTCTCGCCGTACACCATCCTGGGCGGGGCGGCGGGCAGTTTTCTGGGGCTGGTGCTGCCTGCCCGCGCGGTGGCGACGGTGTTCGCCCTCCTGCTGCTGTACTCGGCGTACAACCTGCTGCGGGGCCTGAAGCGGGTGGAGGTCGAGCGGCCCCCCAGCCGCCTTGTGCCCCCGGCCATGACCTTCGCGGGCGTGATGAGCGGTCTGCTGGGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //