Array 1 5587-5009 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGOU010000107.1 Streptomyces sp. ISL-44 ISL44_108, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5586 29 100.0 32 ............................. GCGATCCGCGACATGCTCCAGTCCGGCAACAT 5525 29 100.0 32 ............................. GGCACGAAGAACGACCTGCCGTTTTCGGTGTA 5464 29 100.0 32 ............................. TCTCCGCCCGCCCGCGGGCTGTCACACCCTGA 5403 29 100.0 32 ............................. GGCGCGGGTGGCACGCTGGAACCGGTCAGCCA 5342 29 100.0 32 ............................. GAGCATGGGTGCGGCAAGCGGGCTGGTCAGGT 5281 29 96.6 32 ..............C.............. ACGTGGCACCAGGCCTGTCCCTGGGACCCCTC 5220 29 96.6 32 ..............C.............. CCGCCGGACTGGCTGCCACCGGGGCCGATCGA 5159 29 96.6 32 ..............C.............. ATGCTCACCTCGAGCATGGCGCTGGCGTCGAA 5098 29 96.6 32 ..............C.............. TGCCCGCGCCGTATCGAGGTGCCTCGCCGACG 5037 29 93.1 0 ...C..........C.............. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.0 32 CTGTTCCCCGCGCAGGCGGGGATGACCCC # Left flank : CGAGCGGCGGGTGTGAGGCTCGCACTCCAGTGCGGCCTGCTGTCCTTCATCGAATCCCCCAAAGACCGCGAGCAGCGATCAGCACCTTGCCAGTTGGTCGGCATGGCATCCACAGGCGCCCGCCCGGAGAGGCGGGGCCATACGTTGCCCCGAACACGGCTTCTACGCGATCCCTGCCGGGGTGAACCGCGGACGATCACCAAGGCACTTTCATCCCCACAGAGGCGGGAGCAAGGCCAGCTATCAGAGGCACAAGGATCATCCCGGTATGTGCGGGGAGCAGAGCCGACGGCCTCGACCAGCGACGGCGGGTACCGTTACAACGTACTGGGTCGGACCCACCGACCACAGCAATATCGCTGAGTGCAGGCGGGCAACTCGCAACCAGGCTCGCACTACTGCCTACTTGGGGAGAATATCCCGATACATCCCGGAAGTCGGTTTCTGTGAAACTACGTCAGAATCAGGCTAAGTAAACAAAGACTCCCAGGTCGTTGAGT # Right flank : GCACCTCCTAGTCACCACAGGACAATGCAAGATCAAGCCGTCGGCCGGAGCGGCACCGACCGCGGCAGTGCGGCCCTCGTCCCGCCCGCCCGCCCGCCCGCGCCCGGCGCACGGCGGCGGCCTCGGTCGCTGCGGCCTCGCGGTGGCGCTGCACACGGGCCTGCTCGATCGGCGCCGACGCATCCTCCGCCACCGGATCCGGCTCAGGGAACGCCCTACGGCTGAGCTCACGCATCACCCTGGTCTGCCACTCCACCACCTCCGCGATCCCCGGATCCACCCGGCGGGCCGAGGCGACGGCCTGGTGCGCGGCGAGCGCCTGGTGGTAGCCGGGCGACGCCATCTCGCGCGTCTTCACCGGCGCCTGCGGAGCACACAGTGCGGCCGGAGCCTCCGGTGCGGGCCGTGCGGGCCGGGGCGCGGACGCAGCGCCGACCGCCAGGACCTGGACGGTGCGCACGGCATCGTTGCCAGACCACTCGTTGGCCGCGGCAACGATG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCAGGCGGGGATGACCCC # Alternate repeat : CTGTTCCCCGCGCACGCGGGGATGACCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCAGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 15331-16641 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGOU010000107.1 Streptomyces sp. ISL-44 ISL44_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 15331 29 100.0 32 ............................. GGGCAGCAGCTCGAACAAGACCTCGACAGGCT 15392 29 100.0 32 ............................. GACCTGACCGCCGCCTGGAAGGAGTACAGCCC 15453 29 100.0 32 ............................. CGGCAAGTCAGGGCCTACGAGATCCACCCAAG 15514 29 100.0 32 ............................. TCGCCCCAGTCGCTGGCGCTCACGACGCCGTC 15575 29 100.0 32 ............................. CCGTCGCCCGCGCCGTCCGTGATCTGGCTCCT 15636 29 100.0 32 ............................. GTGATGCTGACCGGCATCCCAGGCTCGGGCAA 15697 29 100.0 32 ............................. CGCTTGAACTGGCTTGCGGCTTCGTCGGCGAA 15758 29 100.0 32 ............................. CGGATCGGGCACGACGAGATTCGTGCCTGGCT 15819 29 100.0 32 ............................. AGCGCATGCGGGAGCGGATGCCGCAGACACGG 15880 29 100.0 32 ............................. CCGAAGCGCTCCGATGTGCAGCTCCTCGTACA 15941 29 100.0 32 ............................. GGCCCCAGCGCCGGGACTCCACTCCCAGGCCA 16002 29 100.0 32 ............................. CCGTGTGCAGGGCTACCGCTGGTACGAGCACC 16063 29 100.0 32 ............................. GAGGCTGTGTCGGCTGCTTTCGTGGCGATGTT 16124 29 100.0 32 ............................. TGGTACTTGACTCCGATGCCGGCCAGCTTCTC 16185 29 100.0 32 ............................. GACTGGGAGTACAAGATGATCCAGGCCGACGC 16246 29 96.6 32 ............................T GCGGCGCAGGGCCCCGTAGGACTGGTGAGTTT 16307 29 100.0 32 ............................. GTCTCCGTCTCGGCCTGCCTCGACGTCTCCAA 16368 29 100.0 32 ............................. CACCTGTCCGGGCCGAAGACTGCGGAGTTACT 16429 29 96.6 33 ............................G GAACTGAAGGCCGCTGAAGGAACCAGCGAGCAG 16491 29 100.0 32 ............................. TTCAGGGCCTCGCCGCACTCTGGGCCGGCGTC 16552 29 93.1 32 .................CT.......... ACGGGCCCACCGGCCAGCACCACGTCCGTGGC 16613 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 22 29 99.4 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : CGTCATGCTCCAGTCCGATCGCGATGTCGCCGTGCCCGCAGGCCGTAACTACGCGGAGGAGGTCAGCTGGTGACAGTGATCGTCCTGACGCAGTGCCCTGTCGGACTGCGAGGGTTCCTCACCCGCTGGCTGCTGGAGATCTCACCCGGCGTTTTCATCGGCGGACCGTCGGCCCGGATCCGGGAGACGCTGTGGGCGGAGGTACGGCAATACGCAGGCAACGGCCGCGCCTTGCTGGCGTACAGCTCGGACAACGAGCAGGGCTTCGCCTTCGAGACCCACGACCACAAGTGGAATCCAACGGACCGCGAGGGCGTCACCCTGATCCACCGTCCGAACGAACGCGCGACTGTCTCGCCGCCAGTAACCAAGGGCTGGAGCAAGGCAGCCAAGCGACGGCGCTTCGGGGAAAGATAGGAGATGAATTAACCGTGATGTCCGAGTCGAGAGAAGTAAGTCGAAGCTGCTGTTACCGCTGACGAAACCCCAGGTCAGTCAGT # Right flank : CCTACGTGCGGATCGAGCAGGGCCAGCGAGCCTCCGAGCTCGAACCGCTGCGCGGGAAGCTGGTCCGACTCGTCGATCGCGGCTGGCTGCGGAAACTGCCCGGCGGCCGGTTCACCACCCGCCTGTGACCAGGAACGCCGACGGTGAAGAAGGCCGCGGCGGCTCCTGTGGCTGCCGTGCCAAGGGCACCGACGGTGGCGCCGAGCACGGCGGCGAGTCCTGCATCCATCGCGCCACTGTGACGGTTGGTACACGAGCAGCGCGAGATGCTGATCAGCTATGCGTGATCGGAACGTCCAAGGGGAGGTAGGTGGCAAGGCCGGCAACGGCTCTCCGTGAGAGAACTTGGTGATTCCCTCTGAGAAGCGACTGTCAGCGCCCCCTGCTATCTGGTGTCCTGTCAGATACGCCGCGAAATACGCCCGGATCGCCAGGAGATGCGATTCATGCCCTTCACTGCGCTGCACGCCGACTTCGGCCGCCTGAACGCCACCCTCCAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //