Array 1 12683-13180 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKAD010000019.1 Campylobacter coli strain 703452 703452_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12683 36 100.0 30 .................................... CAAAATATTGATACTTGGCAAGTTGAATGG 12749 36 100.0 30 .................................... TCGGTCCGACTTGTCAAAATGTTTTTAAAG 12815 36 100.0 30 .................................... ACCGCAGAATAAATATTATGCTTAAGTAGG 12881 36 100.0 30 .................................... CTTATAAGCTTTCTAATGACAGCGCTTTGA 12947 36 97.2 30 ..........G......................... TATTCTACCCAAATACGCATTAAACTCATC 13013 36 91.7 30 .....G....GC........................ CAAATCCAAAGAGTGTGAAATGGAAAATTA 13079 36 97.2 30 ..........G......................... CTTTCAAAATCAATTTTGCAAACTTTAAAA 13145 36 86.1 0 ......T.....GG.T...................A | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 96.5 30 ATTTTACCATATAAACAATTAATAATAGGCTAAAAC # Left flank : GTGAGATCTGATTTATTTATAGATAAAAAAAACAAATTCCATGCAGTGCCTATTTATAAAGCAGATTTTTCTACAAAAAAACTTCCAAATAAAACCCCTGCAACTACATCAAATGGAGAAACCAAAGAAGGCATTGAAATGAATGAAAATTATAACTTTTGTATGTCATTGTATAAAAATACTCCAATTAGCGTAAAAATAAAGGGTATGAAAGAGCCTATTATTTGTTATTATCATGGTTTTAATACTTCAGGAAGTAAAATAACTTATAAAAAACACGACAACAATTATCACAACCTTAGTGAAGATGAAATGGTTGTTTTTAGAAAAAATGATAAAGAATCTATAGTGGTAGGAAAAATACTTGAAATTAAAAAATACAGTATAAGTCCTTCAGGTGAATTAAGCTTAATTGAAAACGAAGAGCGTAAATGGTTTTAGATATTTTTGCTCAAAAAATAAGAAAAAACATTGATAAAATAGGCTTTTTAGATAAGTCT # Right flank : ATAGCTTTTAAATATTTAAATTCATAAGAAAATATTTCTTAATCTACTTTCATCACAACTTTTCAAAAAATCATAGATTTTCTTTCTATAAGTTGATTTATCCTTTTTCCAAGTATTTAGCGTTGGCAATGGAATCGTTGTAATTTTGGCAATTTTAGAATCACTTAAGCCTGTATTAGAAGAATTAATAGAATTTGAAAATATTTCTTTTAATTCTTCTTGATTAGTGTTTTTTAAAAAAAGATATATTTTTTCCCTCCAATTATCTTTTTTTTGTTTCCAGTCTCTAATAGTGAAATAAGGGATATTAGTAATTTGTGAAATTTGGACATCATTGTTCATCAGGCTTGAAACCACTATCTAAAATTATTTTTGTCATTACACCCTTAAGTTTATCAAAATGATTTAAAGCTTGCACATTGCTAACTCTAAGCAATCTTATTTTCCCATCTTTTTTATAAAACACCTGAAAAACTTCATCGCTTTGTTTGCATTTCACC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTACCATATAAACAATTAATAATAGGCTAAAAC # Alternate repeat : ATTTTACCATGTAAACAATTAATAATAGGCTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //