Array 1 1233832-1230759 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035054.1 Limosilactobacillus fermentum strain SRCM103285 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1233831 36 100.0 30 .................................... ATCGTGATAAGGCTGCAATGATTCATCGCA 1233765 36 100.0 30 .................................... AGAACGAATTGAACAGATTGAAAAAGTCGC 1233699 36 100.0 30 .................................... TCTTAACTTTGCTCTTATCAACCAGGTTAG 1233633 36 100.0 30 .................................... ACATGGTTTTATTTTTGACTATGATTTTGA 1233567 36 100.0 30 .................................... TGTTGGGGATATCAACTGCATCTTATCGCA 1233501 36 100.0 30 .................................... TGTTGGGGATATCAACTGCATCTTATCGCA 1233435 36 100.0 30 .................................... ACTTAGTCTGAAGCATTGATCGTACGTGCA 1233369 36 100.0 30 .................................... TAAAAATACTCAGCGCTTGCAGCTTGAGCA 1233303 36 100.0 30 .................................... AGGATTATGAGTATATGGTCGGAAAGGATA 1233237 36 100.0 30 .................................... TGAGGTGCTACCGTCTTTCGATATCTCGCT 1233171 36 100.0 30 .................................... TATCCCTAGCAAAATACCACCTCCTTAGTA 1233105 36 100.0 30 .................................... ACATCCCCAGCCGAACGGGATATGGATCAT 1233039 36 100.0 30 .................................... CGTCAGCGTTTAGCAAATTGTGGCTGCAGG 1232973 36 100.0 30 .................................... TACTTGCCTAAAGTTGGTGTCAACTGGTTT 1232907 36 100.0 30 .................................... CAACTGGACGCGCGCTACTGAATTGGGCGA 1232841 36 100.0 30 .................................... GAGGAGACACACTAGACACACTAAGACACA 1232775 36 100.0 30 .................................... AAGTCACTCATACGTTGTAGCCTGACCTCG 1232709 36 100.0 30 .................................... CACCAGTGGCGATTTGATACAAATGTACAA 1232643 36 100.0 30 .................................... TCGCCGTGGCCGTTGCCAATCGTATCGGTG 1232577 36 100.0 30 .................................... GGTTGGCCTGTTGGACGTCAACTTATTGGG 1232511 36 97.2 30 ...................................T GAGGAAAACATGAAAGGATTAAATTTGCCA 1232445 36 100.0 30 .................................... CAGAGCCATACAGAATCAGCGTGCGTACGA 1232379 36 100.0 30 .................................... TCGAACCGCCTTCATGCGCTGAGAAACGTT 1232313 36 100.0 30 .................................... ATAATTATTCAATTGGGATTGACAAGCTGA 1232247 36 100.0 30 .................................... TTGTGGATCATCAGCATGGAGTTTGACGGC 1232181 36 100.0 30 .................................... CAACTCTGGGGTCAGGTGGCCAGTGAATAC 1232115 36 100.0 30 .................................... CAGATAGTCATAGCGGTGACCATAGTCTTT 1232049 36 100.0 30 .................................... AAATAGGTGTATTTGCTGAAAATGGGACAA 1231983 36 97.2 30 ..........................A......... GTAGTCAAGCGGTATTGCTGACCGTTAACC 1231917 36 100.0 30 .................................... TTATGCAGAGGAGGTGTTATTGAACTAATG 1231851 36 100.0 30 .................................... GCAAGCTAGGCGGCATTCTGAAAAAGATCG 1231785 36 100.0 30 .................................... TAAAGGATTATCAGATCAAATACATTCTAT 1231719 36 100.0 30 .................................... CGGTATCGCACAGCAAACGTGGACAGACTT 1231653 36 100.0 30 .................................... GATCGTACTTCAACAAATTCATTATTGGTT 1231587 36 100.0 30 .................................... CGCAAGGAATTCGTCCGGGCATCGCTTGCT 1231521 36 100.0 30 .................................... GTCAAATTGTTAAAAGATACATCAGGATGG 1231455 36 100.0 30 .................................... ATATTAATTGACAGCAACATTATAGACTAA 1231389 36 100.0 31 .................................... GCACGAACACCATGATGACATTGACTGGACG 1231322 36 97.2 30 ...................................A GACATGATCGATCTATTAACGGTCTTACAT 1231256 36 100.0 30 .................................... TTTTTTCGCCAAGCCAAAAGAGCGAATCAC 1231190 36 100.0 30 .................................... GGTTGGCCTGTTGGACGTCAACTTATTGGG 1231124 36 100.0 30 .................................... ATTGCCAACTTGTAAAACTGTGGCTCAGTG 1231058 36 100.0 30 .................................... TCCTCAAGATCATTAGGGGATAATTAAATG 1230992 36 100.0 30 .................................... TTTACGACAGCAACATACCGTATTTACGTT 1230926 36 100.0 30 .................................... GGTTTATAAGCTAGACCGATTAAGCAGGTC 1230860 36 100.0 31 .................................... AACCGAATATCGAGTTAGAGTTCCTGGTTCT 1230793 35 83.3 0 ....................T......-.TT..A.T | ========== ====== ====== ====== ==================================== =============================== ================== 47 36 99.5 30 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Left flank : TAATCCAACCAAACTTGATAGTTACCAAACGTCACTCGATAAGATGATTGTCAAAAATCTTAGTATCGAGAAGCGAGATAGGATGAATGACCTTGCTCGTGAGATTTACTCAGAAATGCAAGATTCCCTGTTCGAATTCGATTTGCCATTGGAAGTCAGATATGACGAAAGTCTTTTGAGATTATACAAATATGCGAAAATCAAGTATTTGACGCAATTAATAAGGCAACCTTATGGTATAATTGAGACCGATCTAAAATTACATCTCGAATTAAAGGACTGTCAAGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTACCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTAGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGACCGTTAGTTTTTAATGAGAAAACAACG # Right flank : TATAGACTAAGGGCGTTGCTGTTTTTAGCAATGCCTTTTTTAGAAGTGATGGGGGAAAGATAAATATTCCCACGTTGGTAATCTGACGGGAACTTTAGTGGGCGATGTGCTAGGATAGGGCCAGAACGATTGGAAGTGTTTGCCATGCAAATTGATCCCGAACGGATTCGCCCCGAACTGCGCCGAATCGGCAAGGTAGGGTACGCAATCAACCTGATGGCCAGCCCACACGCCTGCAACGAATGGGACGAATAACGGCGAAGGCGAAAATGCCCATTCACTCGCGGCGGGTGATCAAACAAGACGTTTGGATTGAACGCCCTGACCATAGCAAGCTTCGGCTGGCTATTTTCCGGGCCAAGCAAGTTGCTACCAAGCACCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTACGCCTTGGAAACCGCCGAAAATGCCTTGGTTTATGCTGAACAGTTGGTGGCTGACGGACGGTCCGTGATGGTGGCGCCGGAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //