Array 1 5959-6647 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051115.1 Vibrio fluvialis strain 2013V-1197 chromosome 2 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5959 28 100.0 32 ............................ AAGCTCGGGTTCTCTGGTCTTAAAGCTCTCGA 6019 28 100.0 32 ............................ TACAGCAGCCGCACCAGATACACGGGCGAGTT 6079 28 100.0 32 ............................ ATTAACAGATTCGGTAAGCTCTCCTACCTTAT 6139 28 100.0 32 ............................ AAAAAGGTCCGTATCGGCGCGACCACTGAGGT 6199 28 100.0 32 ............................ GCTTTGAGTATGGGTTACATCAACGTATATAC 6259 28 100.0 32 ............................ TAGCGCATCCAGTACACACTTAGCGCGTGTGT 6319 28 100.0 32 ............................ TCTTGAACTGTTCCAAGTGAAATCGATACCTA 6379 28 100.0 33 ............................ TTGGTCATGTGCTCGGTGAGTGATGAGTTTTTT 6440 28 100.0 32 ............................ TACCGTGAGTAACCCGGCCAAGCAGGAAGCGA 6500 28 96.4 32 .............G.............. TTTGACGTAAATGCGCAGAAGATGACGATATT 6560 28 100.0 32 ............................ TCGACGAAGTACTTTACCCCAACTGCCCGCTA 6620 28 71.4 0 .C.......TAC.......AGG.....T | ========== ====== ====== ====== ============================ ================================= ================== 12 28 97.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGCAAACCGCTGGTGGAATGTCTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAATAGCAAGTTTCCGCTGTTTATTCAGATGCAGCAGCAAAGTACATCACAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGCCAATCAGCATTGGCTACCGTACCGAACTTTTAAATTGAACGAAAAAGGGTATTTTTTACCCTTTATTTTTGCTATTTAAAAATATGCTTAAATACAAATGGTTGCAAATGGTGGTTTTTAACAGGGCAAAAATGCATTTTTCATCCTAACTACTTGTTGCAGCATTCTTTTATAGAATTATTTTATT # Right flank : TTAAAACGGGATTCATGGCAAACGGTCGTGGAAGTTGTATCTTACATAAAAACCTAACAACGTCGATATCAATAGGTTTTTTGTGTACTTATTGGTATGTGTAGTGTGTTATTCTGAATTGGTTGCAAGAGACCAACATTAAATTTTTCATAATTGTTTATTGATTTAGTTAAATCATACGTTATTTTCGATAACAACAATGACATTTTAGGTTCGAAAGTATCCAATGATGTTTGATTTCCAGCATTACTATTTCTTACATTGCCACAAAGCATCCTTGTTCATATTACCCAACTAGTGACAGTGTCTCCGTCATTACTTGATACCCAATCTTCTCGCTAGGCGGTGTAGGTTTCCACTATCCAGTTCCAATTGTCGAGCCGTCGCTGCCCAGTTGCCTTGGTTATGATTGAGCGTTTGAACAATGATTTTTTTTTGATACCTATCCGTTGCTTCTTTAAGCCCCATACCTGATTCACTAATCGGCGAAATGTTGGTTG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //