Array 1 70582-71898 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDOE01000003.1 Bifidobacterium bifidum strain BIOML-A2 scaffold3_size335967, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 70582 36 100.0 28 .................................... GTGCCGGGCACCTCGCGGTGCAGCACGA 70646 36 100.0 28 .................................... ACAAACACATTCGTTCGCCCTTGCGGTT 70710 36 100.0 28 .................................... CAATAGGCGACCGTACGGACGCAATCAG 70774 36 100.0 28 .................................... AAGGTGTTCGAGCAGCATTACGTCTATA 70838 36 100.0 28 .................................... GTTTCATAACGGTAATCGGCGCGTTTTT 70902 36 100.0 28 .................................... AGATAAAGCGCCTACACGGGATGTCCAC 70966 36 100.0 29 .................................... CAACGTTAGCACATGGCTACGAAGTACGA 71031 36 100.0 28 .................................... CTTTGCGGCTGGCTTCCATGCTGCATTT 71095 36 100.0 28 .................................... TTGTGTGGTGTATTTGTATTTGTATGTC 71159 36 100.0 28 .................................... CCATTTCACCGCCTGATATTTGCTTGAT 71223 36 100.0 28 .................................... TTAACGATGTTGTGAGCATGATCGGTAG 71287 36 100.0 28 .................................... TCATCCATGCGACACCGTTGACCATGAC 71351 36 100.0 28 .................................... AATAGTGATATCTTGTCTGGCAGTCCGA 71415 36 100.0 28 .................................... CCAAGGACGCGACGTTATCCACGACAAC 71479 36 100.0 28 .................................... TCAACTCGGTCAACCATTATCTGCATGT 71543 36 100.0 28 .................................... ACCGCTTCGACATCACCGTCAACGGCAC 71607 36 100.0 28 .................................... TCGGCAACCAGTGGGCGCTGACCCTGAA 71671 36 100.0 28 .................................... ATGGACTGACTATATCAATACAACCACG 71735 36 100.0 28 .................................... TTCCTGCGACGGCGCTGGCGCGTCGTCT 71799 36 100.0 28 .................................... CCGTTTGGAAACCCTCGTGTGCGAAACT 71863 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 21 36 100.0 28 CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Left flank : AGTTTAATTCATCCGGTTTGACGATACCAAGTTCGGTAAGCGATTTCGCGCAACAGTTTGGTCTGTACTGTGAGAAGAGGATCGATTCATTGGTGGTACCGGAATATCAGGGTCCTTATGAAAAAAGATGAGGACAGTGGTGGCATGTGGTGCTTGGTGATGTTCGATTTACCGGTGAAAACGAAATCGCAACGCCGTGAGGCAACGAAGTTTAGGAACATGCTTTTGGATATGGGCTATAGCATGGTGCAGTATTCCGTATACGTAAGATACACACCGACTCAGGCAGGCAACAGATCGACAGTAATCGCGATAAAGGAGAATCTTCCAGCTGAAGGCATCATACGGGTCCTCCATATCGGTGACCATCAATGGTCGACCTCATTGCGTTTTTCCAGCTCGAAACGGGTCACAGTCGATGAGACGCCGGATTATTTTACGCTTTTTTGAATAGAAGAAATCTAATAAAAGGCGGAAAATAGCCCTTCTTGATAAGAATA # Right flank : TTTATTTATCGTGGTTGGCAGCATCTCTCGGTAGTGCCCGAAAGGTTGCGCACTTTGGATCATGCCCGCCCATGGCGCGATGACCGGTTCGCTTCCTGCAGATTGTCACCGAGCCGGGACATGTCGAGGTAACGCCGGTTGGACCATTCGTTCGCGGTGACGTACCTGATGCGCGCACAGACGAGCATGAGCGCGCCGTTCCCGTCCGGGAAGCTTCCCACGACGCGAGTGCGCCGCCTGATCTCGCGTTTGAGCCGTTCGATCATGTTGTTCTATTCTTCCCGCCTATCTTTTTCTTGTGGGGGCGTTGGAAAACCGCCGTTTTCGCGGGCCGGTCGCGCTGGTGGTCTGACTTGTGGTGCAACTATGGCGCGACTCGGGCCGCGATATGGTTCGGGAAGGTTTTCGCTTCGCGCAACCTCGTCGCGGGTGGAGGGTGATGGGCTGGCGGGGACGGGCGCAGCGCCCATGGTGTCGTTCCCCGTGTGTGCTCCGCGCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //