Array 1 109526-105476 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICB01000002.1 Slackia faecicanis strain DSM 17537 DSM17537T_contig_002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =============================================================================================== ================== 109525 33 100.0 33 ................................. CTCCATGGTCGCGAGGTCGGCTTTCGCCTTTTC 109459 33 100.0 35 ................................. ATCTCGCGGCTTTGCAGAGTGTTGATCTCGCGCGC 109391 33 100.0 33 ................................. TGTTGGTCTGCGAACGTGTTGATATAATCGTCG 109325 33 100.0 34 ................................. ACCAGGGCGGGACGCTGCTACACCCCGAAAGCCA 109258 33 100.0 36 ................................. ATTTATCTTTGGGGTGGCTATGAAACCGACTAAAAC 109189 33 100.0 33 ................................. CCAGTCTGGGCGCTTGATGTGCGTAGCGCGGTG 109123 33 100.0 34 ................................. TGAGTACTTCACCGACGCGCGACCGCGATTCGGT 109056 33 100.0 36 ................................. CGTTAACGGGGTCGATCACCGACACCGATGCGCCGG 108987 33 100.0 32 ................................. TGGGCGCCCTGCGCGAGCGCCCTCCGTCGGAC 108922 33 100.0 34 ................................. CCGTCGGCGCGGCCGTCGTGATAATACTCGTCCA 108855 33 100.0 34 ................................. TTATCGACCACATAGGCAACGGCGGTAATTTCGT 108788 33 100.0 33 ................................. GAAAACGCCGTGTTCGGCAACGACCTGAAAGCC 108722 33 100.0 33 ................................. CTCTTGGCACTTCACGCACTGCATAAGCGCGGC 108656 33 100.0 34 ................................. ATCGATCCTAACGATGAGGTTCGCGATTCCCTCG 108589 33 100.0 35 ................................. TTCTTTTCGACCAGCACCGCACCCGGCACCTCTTG 108521 33 100.0 36 ................................. CAGTTCATCGAGGTTCGTTTCATCGAAGATTACCTC 108452 33 100.0 33 ................................. ATCGACCCAAAGGAACGGGACCTGCTCGAGCTT 108386 33 100.0 35 ................................. CACTTCATCGCGAAACGTCTTTTTGACCATGCCAA 108318 33 100.0 34 ................................. TTGCTAAGCGATGGCTTCTACCTGCGAAAATCCG 108251 33 100.0 36 ................................. TGAATGATGCCCATTTCAGGGCGATCGTCCGCATAG 108182 33 100.0 35 ................................. TGCCTCGTGTCTTCTACGAGCACCGCCATTTACAG 108114 33 100.0 34 ................................. TGCAAGGATTGATGGACACCGACGGCACGATTGG 108047 33 100.0 34 ................................. ACAATCGACGGCGAAAGCATCGGCGATAAAAATA 107980 33 100.0 33 ................................. CGGCACATCGTCGAAGAGCGTTTGGACGAGATG 107914 33 100.0 34 ................................. TGTGCAGTTCTGCGTGTCGCGGAGAAAGCGCACG 107847 33 100.0 33 ................................. GCTATCGTGGGCGTTCCGCCCTGGAACCCCGCA 107781 33 100.0 34 ................................. TGCATCGCTCCACTCGAAACGGCATGTTTCAGGC 107714 33 100.0 36 ................................. CCAGTCTGGCCGCTTGACGTGCGTAGCGCGGTGGTT 107645 33 100.0 34 ................................. AGGTACAACAAGTTTATTTTGTCCGTGTACCGAG 107578 33 100.0 36 ................................. TCGACGAGGAAGTGCAGCTCGATGCCGCACTCCCTC 107509 33 100.0 34 ................................. ATGCTCACGGGCGTAGGCTTCGGCGAATCCCTGC 107442 33 100.0 34 ................................. TTCGAAAAACGGCTTCTTGCCCTTCACGTACACC 107375 33 100.0 34 ................................. TTCGAAAAACGGCTTCTTGCCCTTCACGTACACC 107308 33 100.0 35 ................................. ATCACCGAGGGCGACGTGCTCCGCCTGATCGTGTC 107240 33 100.0 35 ................................. CTGATGCGCTTGCAGGAGTCCAACCCCGGCCGCTT 107172 33 100.0 33 ................................. TTGACCTGGTAGCCAAGCGTTTTCCAATGCGCG 107106 33 100.0 35 ................................. ACGCCGGAGCTTCGGTTGAAAGCCCGCGTCGGCTC 107038 33 100.0 34 ................................. ACGGTCGAAGAGTTGGAAGAGTTCGGCCGCGTCG 106971 33 100.0 33 ................................. TACGCGGACAACACCGCGTATTACACCAGCAAC 106905 33 100.0 35 ................................. TGCAAGGCGAACAGCTGCTCGTCCGACAGCTTGCG 106837 33 100.0 34 ................................. CGCGAAGATAACGCAGGGCGGCGCACCGTCCGAG 106770 33 100.0 33 ................................. CATCGATTCGGCTCCATCTTTTGAGGGCATGAA 106704 33 100.0 33 ................................. ATCCTAGGGCAGCCGCTCCCGATCTCCCGTGCG 106638 33 100.0 33 ................................. GTTTCGACAACACGGACGATTGGCGTTGCATCC 106572 33 100.0 34 ................................. GTGTTCTGCTCGCCCGAAGAAGCGGGCGAGAGGG 106505 33 100.0 34 ................................. ATTGACCGTAATGACTTCTTCACGCAAAACACCA 106438 33 100.0 33 ................................. CCGACCTCCAGGACCTCATGATGCGGTGCCTTG 106372 33 100.0 35 ................................. GCGCTGTGCGTGCTGCTCGCCTCCCGTTTCGTCGG 106304 33 100.0 35 ................................. CGCCTATCGCCGGCCTGCCTTCGCCGGCCGATATC 106236 33 100.0 34 ................................. TGGGCGGGCCTCGCGAAGTCCATCGCCGGCAGCT 106169 33 100.0 33 ................................. GCGAACCTCGCGCACAACGTGCAGACCAGCGCA 106103 33 100.0 33 ................................. ATTGCCTAAAAAAATACGATGACGGCCACGGCT 106037 33 100.0 34 ................................. AAAACGTCGGCGAGTTGCCAATATTTGATTTTCA 105970 33 100.0 35 ................................. ATAAATCGCGGATGCAACCACGATTGCGTTTGCTA 105902 33 100.0 33 ................................. ATGATCGCGAAGTCGCAATCGATCGCGGCGAGG 105836 33 100.0 33 ................................. ATCGTCTATGACGCGCTGCGCGTTCCTGCGCTT 105770 33 100.0 34 ................................. TGATAGCCCATGTATTCGGACGCGATGTCGCGGC 105703 33 100.0 34 ................................. AAACGCTGGGTCACCCACGAGGTCTTGCTGGCCA 105636 33 100.0 95 ................................. CCCGTGCAGACGGGGACGGCGGACCGCGCTCGCGTCGCCCTCTTCGGGGTGTGGATTGAAGTCGGCCGCATTTTCGATGCCGTCAGCCGCTTGTC 105508 33 72.7 0 .C......T.C.....T.G.T.CA.....G... | ========== ====== ====== ====== ================================= =============================================================================================== ================== 60 33 99.5 35 GTCGCTCCCTTCGCGGGGAGCGTGGATTGAAAT # Left flank : GTGTTGACTGACAGCTTGCGTCGCGATTTGAAGAACCTGCGCGGCTTCGAATTCGACAGGTCTTTGCTGCCCGGTCTTCCCGAGAGTCGCATCCGCTTGATGGAGCGACTGATCGAATGCCAGATCGAAGCGATTCTCAAGGGCGACCCGGTGGGTTCGGTGCGTGGCTGCGGAACCGATGACGGTCTGGATTCGTTCGCATCGCTGCGGCTCTGATATGGCTTGGCGACAGCGAAAGTCATTGCAACGAGTTGCCCCGGGGCTTCTATACAATATGCGTAGGCTTCGTCATGGTGTCGATGATCTGGGGAATCTTTTGGTGCGGCGTTGTCCAGCGAGGCTGGTGAATAGGTGCGAAGCGAGAGTGGCCGGATTTCATGTGCGGGGTTCGCACCTCGAAAAGTTCGATTTAACTGCTCCAGGAGTCGCGGGGTATCGATTCCGAATTGCCACCTGCCCTTCAGGTTGATTGGGTTGAATGTTTGCTACTATATGTAGCG # Right flank : ATGATTCATCGAGACGCTATGCCGAGTCGCGAAGTCGCCACTATATGGTGGCGGGGGGTTGAAACGACGATGGGCGCGAGAGCGCAGAAGTCGCCCTTTTGCAGGGTGTGGATTGAGGCGTCCGACATTGGGATTGTTTGGGCTGTGTTCGGCATGCTTTATTTCAAGGAGGCGGAGGGCGCAGTCTTTTCTGGCGCTCGATGCTGCTCGGGGTAATCTTGCCGGGCCTTTTCGGGTGCCCCGCTCGTCAGCCTCCAGTCTTTCCTCTTGTAGCTGGCGGCTAATGATTCTCTAGATGGTACGTGCTAAAATAATTAAAGTATGTACGAAAAGAGGTACAGTTATGCCTGATGACCGTTTGTATTATTCGCATCGAAGCGAAGACGGAAGGATCGAACTCCTGAAAGATCATCTCCGGGAGGTTTCCGAGATGTCTGCGGAGTTTGCGAGTGCTTTTGGGGCGGAATCCTGGGGTCGCGCGGTCGGCTTGCTTCATGACG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 3294-4585 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICB01000006.1 Slackia faecicanis strain DSM 17537 DSM17537T_contig_006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3294 36 100.0 30 .................................... GCTGTGGCAATGTTGAGTGATGCTGATATG 3360 36 100.0 30 .................................... CCAAGATTTGTCGTCAAACTCGCGCGTTTC 3426 36 100.0 30 .................................... TACTATCGTCGTCGAGAAGGCGTCGTGGTT 3492 36 100.0 30 .................................... CGGCGTTCTGCGTGGTTTCGATGGCTTCGT 3558 36 100.0 31 .................................... TAGTACGGATCGCGTCTATCTCGGTGCCGTG 3625 36 100.0 30 .................................... ACTATGACTTTACTTGTATACGTCGAGCGG 3691 36 100.0 31 .................................... TTGCCCGAATCGTCAAAGATGGCCGAGATCA 3758 36 100.0 30 .................................... TAGGCGGTTTGGGCAGAAAGATATGCACCG 3824 36 100.0 30 .................................... CAAAGACGCATTGATGCCGCGCGAGGTGCA 3890 36 100.0 30 .................................... CTACACGAAGCCGCGAGTGTTGCCGATAGG 3956 36 97.2 30 .......................A............ ACGGCCTATTACGACTACGCCGTGGGCAAC 4022 36 100.0 30 .................................... TATCCAGTACGCGGGCTATATGTGTCTCTC 4088 36 100.0 30 .................................... TGCGCAGCCTGAACTCTTTCAGCGTTTGCA 4154 36 97.2 30 .............................C...... TCGAAGCCGACTGCCAGCAGGTGCGCGGCG 4220 36 100.0 30 .................................... TTCCGATGCGTGCTGCTTCATCAGCGCAGC 4286 36 100.0 30 .................................... GAAGACGAGTCTGTCGTCGGCGTCGCATGC 4352 36 100.0 30 .................................... AAACGTGATGGGGATTACGCGGCGCCTAGC 4418 36 100.0 30 .................................... CTGTGGGGATTCGTAGACGGGCGCGTCCTG 4484 36 100.0 30 .................................... ACGAAATAGCCTTCGGCGTCGCGCAACGGC 4550 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.7 30 ATTGTATCAGCTTGGGGAAAAGTGCGAGCTCAAGAC # Left flank : ATGTCTTCAAGAGGAATAGCCAGGCTTTTATCGTCCGTTTCGATCTGGAGCAATCCGTTCCGGACGCATAAATGCGCCTTACTCTGAATAAGGATAGTCCTCTGAGCCATTTTTCACGCACCTTCCCTGTGAATGCGCTACAATAAGGCAATGTCAAACGTCTCACCTTGGGGAAAAGTGCGAGACTCCAGACAAGGGGAACCTACAACGGTAGGTTCACCCGTAGGGTTACCCCCGCGTCATCTTCGGAAGGCGCGGGGCGAACTCTTTTCTGGGCAAAATAGCAGCCGTAAATTCTTACGCCATTCTTCCATGACTCCATAAAGCTAACACATTATGAGGGTATTTTTCACCCCTCATCTGGGTGTTTTTTGGCCCAATGACAGCTGGAATAGCAAAATAAAATCGAATAAAACACTCTCACATGCAGTCGTTTTCGGTTGGATTTTATTTGAGAGAAAATGCAAATCCCCTGATGACAGGGGATTTTTTCGATACAT # Right flank : CGTACTCGATGGCAACCAGTATCAAGAACCACACGGAAGCTTATTGGAATCAAAGCAATTCGGACCTCGTAAAACCAAGACGAGGCCCGAATCGATTAGGCTAACCGACAATGCCCCCACGAACCACCTTGGGAGCATCCTTGCCCGTAAGACTTCCAATGGTCGGCGCAGATATCGACTCACGCGTCATTGGGTCAACGAACTTCCATGCAACACCACCCATGTCAAAACCAGAAAGGCACCCAACCATCTCTTTCACCCTGACAACATCACCAAGATACAACTCAACCGGACGCTGGAGCAAAAGCCGTTCGGGAACAGGCGCCCACGCCGAACGGCCGCAGTGGGCCTTTGCGATTCGCGGCACATACGTGCCATCCTTAAGAGCGGGAATATCAGACTTGTACACCGGGTCGGCATACCAGCCGCCAACGACCTTCCCCTTCTTTTTAATCTCTGGATCGTGCCACAAACGCAGGCACAGCATCTCGCTCACCTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTATCAGCTTGGGGAAAAGTGCGAGCTCAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 66922-67939 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICB01000007.1 Slackia faecicanis strain DSM 17537 DSM17537T_contig_007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 66922 36 100.0 30 .................................... TGAGTTCGTGACGAACAAACCAGAGGGTTG 66988 36 100.0 29 .................................... AAAAACGGAATCATAGCGGCCGTTCCGGT 67053 36 100.0 29 .................................... TATCCACCTCCCGCCGCGTCGGAAAAGCC 67118 36 100.0 30 .................................... AAAGCGGTTGGCTCGAACCCCGACTTCGCT 67184 36 100.0 29 .................................... CGAGGCCTACGACTGCGACGGGATCCCGT 67249 36 100.0 30 .................................... CTTCGAAGCGGGGGTCACCGTGTTCAACAA 67315 36 100.0 30 .................................... CGTGCGCCGTCGCTGCATCGCCGAAGAGTA 67381 36 100.0 29 .................................... GGCGGGGGCGGCGCGGCTGCGCAAGACCC 67446 36 100.0 30 .................................... CTCGGGATACGTCAACGCGACCGACCGCGA 67512 36 100.0 29 .................................... TATCCGGACGAAAACGCGCCGAAGCCCGC 67577 36 100.0 30 .................................... CATAATCAATGAGTCTTGACAGGCTTTTAG 67643 36 100.0 30 .................................... GCGGATCTCGTACATTTCAACGGTCTGTTT 67709 36 100.0 29 .................................... GGCTTAACGGCCGTTACCTCGCATCCCTT 67774 36 100.0 30 .................................... CATCGTCGCCGATAACGCTCTTGATGATCT 67840 36 100.0 28 .................................... CGGCGAGGCTGCGAACCTCGGCCATGCC 67904 35 88.9 0 ............................-.A.G..G | G [67936] ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.3 30 GTTTTGGTGCAGCGTCATTCTGGGTAACAGCACAAC # Left flank : GCGGATCGTTGCGGCTGCGATGAAGAAGGTTCTCGCTCGGGTAGTTTCTGAGGGAGACTGCGTCGGGCTTATGGAAGAAATGAATTGCCGCATTGAAGAGGTGTTCGAGGGGCAATTCGAGCAGATGAATGCCGACTATTATTTTTCGGAATCATGGGATGCCGCGAAATATATCAAAATGGCAGGGTTTGCAATTGATGACGCAGGCGATCGGACCGTTTTCGATAGGCTAACGCACTTCATCAGGATATGTGCCGACCTTTTTCCTGAGAGTGTTATCGCTTTCGTGAATGCCCCAGTGTATCTCACCGACGAGCAATACAATGAGTTCTGTGGATTGGTCGTCGCTCAGCAATTGTGCGTTTTGTCGTACGAGCAGGGCGGCGGTAATAAGTTCGGGAACCTTGAAAATGGATTGCATATTGACGCAGACTATATTGAAGAATAGTCGATTTACCCAGAATACCGTCCCTTGCAGCAGGGAATTTGCCCGATTTGAG # Right flank : GGGGCGGCCTATAGGCCGCCCCTTCCTTCGCTGGGAACCGTTTGATGTAGTACGAAACCAGCTGGCCATCAGTCGAAGTACTCGTAGCGCCAACGGCTGCGCGGCGACGGCTTTTCCTCGCCGTTTCTTTTCAGCAGGCTTTCTTCGCGTCTACGCTTGCGTCGCATCATCGCGGTGAACTTGCCGTGGGCGCCGTGGTTGGCCGCGACCATCCACTTGTGCCTGTCGCCGCCGAGGCGCCAGGGCCTGTCTTTGCGCGTTCTCGACATAGCGGCTCCTTTCTCGTTTCCACGTTTCCGCCGCTGCGGTCTTTCGTCTGTTTGCGTCAGACGGCGCGTCAGCGCGAAACGTGCTCTTTCAAGAACTCGATGGGGTGCGTGTCGGCCACGCGATAGATCGCGGCCGCCAAAAGCGGCATGATCAGCATGGTGAGCGCGCCAGCCGAAACGAACACCGAGGCCGTGTCGGCATCCATGGCTCCCGCGCCCACGGCCACCGAC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGTGCAGCGTCATTCTGGGTAACAGCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //