Array 1 186221-186949 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMDJ01000007.1 Pedobacter mendelii strain CCM 8939 sequence07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 186221 46 100.0 30 .............................................. GCAATCAGCATCACATGTATATAAAACTCC 186297 46 100.0 30 .............................................. GATGCAAAATTTTCAGCTACTGGTCATACT 186373 46 100.0 30 .............................................. AGCAGCTTTAGCTTTACTTGCAGCTTCTTT 186449 46 100.0 30 .............................................. AATATTTCCAGCTAAAGTTGCAGCACCACT 186525 46 100.0 29 .............................................. AAATCATTATAGTAGATGGGTGCTATGCT 186600 46 100.0 30 .............................................. AAAAGCCACTAATACTTGGTTGCTGATGGG 186676 46 100.0 30 .............................................. CAGCTTCTAATTCATTACGTCTGTTTTTAA 186752 46 100.0 30 .............................................. ATCATCAACTATTAAAATTAATTCTGCACT 186828 46 100.0 30 .............................................. TAAATTAAGTAACATATCCGCAGGCTTCGG 186904 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 10 46 100.0 30 GTTGTGATTTGCTTTCATTCTTTGAGATACTGATATTTACAACAAC # Left flank : TAAGGTTATAAATGGAGGTTTGAGCGGCGAAACATCGGCAGGAGGGAAGGGCAGGATAGATTGGCTTTTGAAACAGAAAGTAGATGTTTTTGTATTGGAACTTGGTTCTAATGATGGTTTACGCGGTGTACCTGTAGCCGAAACCACTAAGAATTTACAAAATATCATTGATAGGGTTAAAACGAAATATCCTGATGTAAAATTGGTGATGGCAGGCATGCAAATGCCACCAAGTATGGGTACGAAGTACGCGGCGGATTTTAAAAATATATTTCCTGAATTGGCAAAGAAAAATAATATGAGTTTAATCCCATTCTTGCTTGATAGAGTTGGAGGCATTCCAAAACTAAACCAGCCAGATGGCATTCATCCAACAGCTGAAGGTGATAAAATTTTAGCCGATAATGTTTGGGTGGTTTTGAAGCCCTTGCTGTAGACGCTTATGCAGTTTCCAACTGCCGTAGGAGCAAAAAAAGAATGAAAGCAAATCACAACCGCAG # Right flank : CATACCGTGGTTTATTTATCTGTATATCATTGATTTATCTCAAAAATTAGAATTAAAAAAATCTGGTCGCTTTTGCGGCCAGATTTTTATTCTAATGTTTATTTAATTGTAATTGCAAAGTAATGATTAAAGAACAGCTGATATTAGTTTATAATTCTCTTATTTAGCTTTAAGATTCCCAATCAGGTTAAGAATGACATTATCTTAATGTATCTGTAGACATAGAAGACGGAGAAATACTAAAACAGTTCTAATTGTTGTGGCGTATCTGGTAGTTCTTTTTCCTTTTTACCATAAAATAATTCCATCATCCCAAATTGTTTATCGGTAACTGTCATAATACCGATATGTCCTTTTTCCGGCAATAATCTTTTAACCCGGTTAATATGTACATCGGCATTTTCGCGGCTGCTGCAATGCCTTAAATAAATTGAAAACTGAAACATAGCAAAGCCATCCCGTAAAATTTCCTTACGAAATTTTGAAGCAATGCTTCGTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTCTTTGAGATACTGATATTTACAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //