Array 1 73538-74117 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAP01000012.1 Lactobacillus crispatus strain NCK974 NODE_12_length_76821_cov_129.886252, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 73538 29 100.0 32 ............................. TAGAGAAGTTTGGACTTTAAACGACTTAAATT 73599 29 100.0 32 ............................. TGTGCTACCTTTTCCCATGACAAAATAAGTCG 73660 29 100.0 33 ............................. CGTGGCAAAATGATAGCCATGCAGGTACATATG 73722 29 100.0 32 ............................. AAACCGTTATGATGTTAGGTTTTGCCTGAAAC 73783 29 96.6 32 G............................ CAGAGATTGGGCATTCTGGCTTAGAGATATCC 73844 29 100.0 32 ............................. TAAGCAAGAAACAGGCTTCATGCCGCAAGATT 73905 29 100.0 32 ............................. CCCCTTGCGTTACCTAAGTAGTAGCGACCGGC 73966 29 100.0 32 ............................. ATATGGAGGACATATCAACTCCTTAAAATTTT 74027 29 100.0 33 ............................. GTCACCCATGCGGGCTTCACCTTTGGAGATGTG 74089 29 93.1 0 G................T........... | ========== ====== ====== ====== ============================= ================================= ================== 10 29 99.0 32 AGGATCACCTCCACATACGTGGAGAAAAC # Left flank : TTCTTGAATATAAGGCATTTGTTCGAGCAACTCTTCTGGAGTTTTCGCACGTCCACCTTTGTATTCGCCGTACATTTTTGTTCTAAAAGTGACTTTTCCTGCATCAAAAGCTACCAATACGTGGGTCGGATCAACGTCTTTTAAAAGGACATCGAGCATGTTCTTAAAAGCGTAAATGGCATTGGTATGCAGGCCGTCTGGACTCTTGAAAGATTCTAGTTGACGATAAAGAGCGTAAAAGGCTCTGAAAGCTACAGAGTTACCATCGATTAGAAGTAATTTTTTATCTGCCATTTTATTCCCCTTTTATAAAAATTGTTCTCTATACTTACTTATCTATTTTACCAGTTTCAAGGGTAATCTTTTAATAGGAAGTTTAATGGAAAAGAAAAAAGCTCCGATTATAGGACTTTTGCTTGTGATTTTTCTTTCACTGCGTCAATTTAGCTCCACTTTTGTGAAGAAAATAAAGTTTCAAATCGTGTACCAAAGTTATTGTA # Right flank : CTTTATCGAGGTTAGGACATGCTCTCTATACAAAACTAGACAAACTCGCTTTTCTAGTGAGTTATGGAGTCTTGTTAAAAGCGCCCGACTTTAGTCGGGCGTAGGTTGACGGTGTTCAGTTTTTTATGAAATTGTAACGTTATCTTAAAAATTGGTCTAAAATAGTGTTATATTTATGACGATAAGTCATAAAATTACGAAACTGTCAAATCTTTTGTGTAAATAGATCTTTCTCATAGATCGATTTTTTATTCTTTATTTAGTCAAAGTAAGATTCTAAGGTGTCCTGAACCTGACCAAAGCCCGGTCCTAAACAGCCAACTTCAGTTCCTGAACCAAATAAACTAACATCGGAGCCCAACAAACCTAGTGTGAAAACTAATAATGACAATCACGGTAAATCAAAGAAAAATTCAGGTACTACAAAGCATTCAAGCAGAAACACGAATAATAATCCAAAGGCTAGAAGAAACGTAAAACGTCAATATAACTCAAATAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGATCACCTCCACATACGTGGAGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 59-211 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAP01000070.1 Lactobacillus crispatus strain NCK974 NODE_70_length_213_cov_249.835443, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================== ================== 59 31 100.0 30 ............................... TCCATCTCATACATCTGCACTTGTGGCTTC 120 31 100.0 30 ............................... GGAGGATTAGGCTATGACTATTTATGAAAT 181 31 96.8 0 .............................C. | ========== ====== ====== ====== =============================== ============================== ================== 3 31 98.9 30 GTTTTCTCCACGTATGTGGAGGTGATCCTAA # Left flank : TTCTCCACGTATGTGGAGGTGATCCTGGATATCTCTAAGCCAGAATGCCCAATCTCTGG # Right flank : AA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCTCCACGTATGTGGAGGTGATCCTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 5394-5605 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAP01000008.1 Lactobacillus crispatus strain NCK974 NODE_8_length_88218_cov_143.028243, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5394 28 100.0 33 ............................ AAGGTAAGCAACAATGATTTTGGACGTGATTTA 5455 28 100.0 33 ............................ TGAACCAGATCAGTAGTAGCAGGTGTTCCGTTA 5516 28 100.0 34 ............................ GTCACCCATGCGGGCTTCACCTTTGGAGATGTGG 5578 28 96.4 0 ................T........... | ========== ====== ====== ====== ============================ ================================== ================== 4 28 99.1 34 GGATCACCTCCACATACGTGGAGAAAAC # Left flank : TTGTAGTGTATTATTTGCCTGACTAAGCTCTGACATAATTTCTTTGAAGCATTCAGGCTTTAATTTAGCTTTTTGTTGTTCGAAGGCTGAAGCGGTCATTCTAGAATTCATGTCAGGAAAAGCATGAAAAATTTCCGAATTCAGGCTGCCAGCTCCCATGTTAAGAATTAACTTAATCAAATCAGTGGAATTGAGCTTACGACAGCGAGTAAAAGCTTGATCAGATACAGAGAAATCGTGAATGTTGTCAGCGATTTTATTGATAATACTATCCATCAGTTTTAAAATATTTGAGTGAAGGGATTTCATAAGAGGCACAGCTTTCTATGAAAGACCAGATAATATGACGAAAGTGAGCAGAAGGGTAAATAAACTCTGCTCACTTTTTATTTTAAAAAGAAAAAAGACCGAATCAAAATGATTCGATCTTTAAAAGCTGTCGATATAATGTCAATGTCTTAACTTAATGACATTGCAATTTAGGATTTGCTTTTTGTTAT # Right flank : CACTAAAAGAATCCCATCGTTAAGCCATTTAGATTTAATAAAAAGCTGAAATTTATTCAGTTTATATTTTATACAACAATAATTATACCAGTGCATCCCTTATCCTTCACTCCAATAAACAAATCCAAACTAAAAAAGTCCCAAACGGGACTTTCTTCACACATCTAATCTCTCAAAGCACGATTGCCAATATCATGGCGGTAGAAGCAATCTGGCAGATCAAGCTTACTCAAATAAGAATACACATTATCCTGCGCCTGGACTAAATTGTCAGCTTCCGAAATCACCATGAACAGGCGGCCGCCATCACCTATCAGATTATCCAAATCACCTTTGACGTTGGCGTAATCGATATAAGTATTGCTGCCATCAGGCAACTTGCCGATCTTGACGTTAGGTGCCGGATGCGTTGGATAACCTTGGCTGCAGACAACCACGCCCAAGATAGAATTATCATTTTCTTCAATCTCAGGCAATTTTTCATGATTTACTGCTGCGTC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCTCCACATACGTGGAGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1090-756 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAP01000003.1 Lactobacillus crispatus strain NCK974 NODE_3_length_145674_cov_107.498190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1089 29 93.1 32 .............G..............C ATTACTGATGTCTGTAAAATCATAGTTCCTTG 1028 29 96.6 32 .............G............... AATATCATCAAGCTGGCTAATTACTGATTGTT 967 29 89.7 32 T............G..............C CATCACAAAACATAGTGAAGCAGTTACACCCA 906 29 100.0 32 ............................. GTTTCCACATACCTTGCATTCAGCTGATTTAA 845 29 100.0 32 ............................. ATCTCTAGTAGCTCCTACAAAAACATCAATAT 784 29 89.7 0 .......................AT.G.. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 94.9 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : GACGATTATTAGTAATGGTTAGTTCATTTTTGCTTTCACCAATTAGTTCACAAACAGTAGAAGTAGACTTGCTTACATCAATTCCAAAAGTAACTTGCATAATAAAAACCTCCAAAACTTAGTAGTAAAACGTATTTACTTAAGAAATCAGATCTAATTTTCTAAACTCGACATCTAGTGTCCACATTCTTCGAAGAGACTATTGAAAACTTAAGTAAAACTGCCAGTTTATTATGCGACATCAAGTGTCTAAAGACCTCAGGGCATATCGTTTTACTACTACTTTAATTCTACAAAAGAATAAAAATAGTGAATCAATTATCCCGTCGGATAACTAATTCACTATTTAGCTTAGAATGTTTTGTATGTTTAGGGAGACAAGAAAATTCTATTCGTTGGATGACTAATGAGACAGAAATAGATACAATAGTAATTGACAAAGTGATGAAATTTTGGGATCTATTGTTTTGTGATTGTTGTTATATTGGGATTTGTTTACT # Right flank : ATATTGGGATTCCTGAAGAAATCATGAATGTAATTATACGAGACCACAAGGAAAAATTTTAAAATCTCAGGCTTCTAAAAAGCAAAAAGAAATTTTTAATAGTTGGCAGGAAAAATGAAAGAAAATATGTAAAGACAACTAAAATAATCAACAGAGCTGCTCTTGGAATATTTATTGTTGCAGTAGTAATTTTTTATTATAGGGTTAGTGAAGTAAAATGACAGTTAGTGAAGCACAAAAAAAGACGACTAAAAAGTGGGATACCAAAAACAAAACTCGAAAACAGTATTTAAATCGGTTACTAAAAATTTTATTTTGAAAGAAGCCACCACAGAGGACCTTGAACAAATTAAAAAGTATTTTGGGCAAAGAAAACACGGAAAAGATTGATTGTGGTAGAAAACGCTGCATGAATAATTGTAATTTTTAGTAAAAAGTTTTGGAGGTACTTTTTAATGATTGATTTAAATAGTTCAGATATTATGGACGCACAAGAAGCT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : GTATTCTCCACGTGTGTGGAGGTGAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 23687-23107 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAP01000003.1 Lactobacillus crispatus strain NCK974 NODE_3_length_145674_cov_107.498190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 23686 29 100.0 32 ............................. GTGCTGGGGATTGGCGGTAAGACTGTAGCCAA 23625 29 100.0 33 ............................. TTGAAGAATGTTAACGCACAATTGCAACAACAA 23563 29 100.0 32 ............................. ATATTTGCTATTAAGCTACTACGACAATATTG 23502 29 96.6 32 ............................C AAGCCGGCACACTTGACTATCGTATTACTTCA 23441 29 96.6 32 ............................C TACAATGATGAAATACATTCAGCAAGGAAAAA 23380 29 100.0 32 ............................. TAACAATTCTTATATTTCTTTATTATTTAAAA 23319 29 100.0 32 ............................. GAATATGGATCCTCGCTAGCTTCTGTGTCGTC 23258 29 96.6 32 ............................C ATGGACAGTGCTCTCGTTGGGGCAGTTGCTAC 23197 29 100.0 32 ............................. TTGGTGCAGTGAATGAGAAATATGGGAATGCT 23136 29 82.8 0 ...........AC....T......T.A.. | A [23115] ========== ====== ====== ====== ============================= ================================= ================== 10 29 97.3 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : GATAAACCAACGCTTGAAGTTAATAATGCAGTACCTAACAAAGAAATTATTAATTTACGAAATTTCATTATAAAAACAAACCAGATAAGTTCTGATTTTTATCTCCTCTCTTAATTCACCTAAGCTATTGTAGCTCAGCAGTTTTACGAGAAAGTTACAATTAAATTTCGATTAATAACAAAAAGTTAGTATAGGTATATGTGAATATGCTTTTGGTTAGGCTAGTTAAAAGCGGATGATAAAGCAGTGTCATGGCTAAAGTGTTTGGGTGAAATTCTTAATTGTGAGTAAGAAAGATTGGCAGACAAATAATATTTTTGTTTATTTGTTTAGGAGGAATCATAGCAGAATGATATTATGATTCCTCTTTTTATTTGAATATTATGTCCAGCAGATATTGTCTATTTAATAAAAATCGATATACTTGGTAGTAGGATCAAAGTGATGAAAAAATGGTGTTTGCGTATTTTCATTTGGCGCTATAAAGGGATTTGTTTACT # Right flank : GTCCTTGAGCGCACAGATAAATAGCCTATAAACGCTGGTATGCCAGCATTTTTGATAGATGAAAAGTGTACTAATTCCTCTTTTGGTGATTGGAATTAGTACACTTTTTGCTTGTTGAGCTAGAGGGTCGAGTGGATAACGTGCTGGATTTTTAGGTTGTATAGATAAGTGTCCGTTTTGGGGAGTTGAGTTGGTTAAATTGATGAGAGAAGCAGTAATGGTTGATATGACGATAAGATAATGGATGTTAATTATTAAAGATATTTATAATCAAAGATTTAATCAATTTTTGTAAAATGCTTTTATGCTAGATTTATATCGCAATAATCAAATGGAAGGATGAGAAATATGGTTGACTATATTGCAAAAATTAAACCAATAAATGCGGATAAAATTGAAACACAGGCGCATGGAATAGCAACATTCAGTGAAAATGGTAATAGCCTTCATATTCATGTGGAAATGTTTGATACGCCTGCCAATATTAAACATTGGGAACA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 26686-26411 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUAP01000003.1 Lactobacillus crispatus strain NCK974 NODE_3_length_145674_cov_107.498190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26685 29 96.6 32 .............G............... ATGCTGGTCGGATCGCTCGATTTATGCAAGGT 26624 29 100.0 31 ............................. ATGCAGGATATACCTAATAATTTAAAGACTG 26564 29 100.0 32 ............................. GCTATCAATTGGAGTAGGTGAGACTGTTACAG 26503 29 96.6 32 ............C................ TTACGTGACTGACTAAAAAACTGAATCCAGGC 26442 29 86.2 0 ...........AC..........A..A.. | G,A,C [26413,26416,26420] ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.9 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : GGTTTACACCCAACACCAGAAGATGCAAGTAATGATTGTTACTCAGCACCCACAGCATATTATCGATGGTATTCAAAACCGGATGCATAGAGGAATTACCATTTTGCATGATGCTGAAGGTGCATATAGTCATATTGAAAAGACAGTTTTGATTACCATTATTGATCGATATGATATGTATGATATTCGCCAAATCGTGCAAGGAGCAGATCCGTATGCTTTCATGAGTGTTAGTGAAGTTGAAAAAGTATATGGTCGCTTCAAGGAGCAAGAAATCGTTTAATGGATAGCCCTTAAATCTTGATATATAAGGATTTATAAATGAAATTTGAATCCTAGGGGCACTTTGGGAGCAAAACTATTCAAAAAGAAGCAGAAATGCTTCTTTTTTATTTGGAGTGGCTTTTTGTAATTATGGCTTTATTATTGGTCTTTGTTAAAAGTGATTAAAAATGATATTATTTCGATTGAGGGATGTTGATATATCGTGGATCATTTAG # Right flank : GCTCTGAAAAATATGTTCTATAGAGTGACTGTTTTTGTATATTATTTAAAAATATTGTTGATGGTGCACGGAGATTGCGTTCACTTATATAGTGAAAAGATGCTAAGAAATCTAAAATAGAATCGAGATGAATTGGTAATCTGGTAATCGTAAGAAGGACTTAGCTACTAATCGTTGTATTCAATTTTGATAACAAATTAGTTAAAGAGCAAAAAATATGAAGAATTATAAATTTAATAAGTTTATGTAAAAACAGTGTCATTAAGTTAGGCTATTGATTTTGGTGAAAAAACAATTAAAGCATCATTTGGCTTTAGACGGCCAGATTGATGCTTTTTTGGCATATTTTTCTAAATATCATTCGCGTTACACGTAAAAGCGTGTGTTGTATATAGTGAAAGGAGGCTAAGAGAATCGGAGCTAAGAGGTGACAAATATGCCGAAAGCCCAATTGCAAAGTGCAAAAGAAAAAACCATAAATCAAAGTTCACTTCAAGTTA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //