Array 1 130175-130539 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORR01000002.1 Paenibacillus antibioticophila strain J41TS12 sequence002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 130175 32 100.0 33 ................................ TTTTTGCCTTCCAGCTCCCGTAGCTTAAGCTCG 130240 32 100.0 33 ................................ GTCTTAACGCCGCCCTCACCGATTACCTCAACG 130305 32 100.0 37 ................................ TTCCGGAGACAAAGTGTATGGGATTACTGGTCCGCTC 130374 32 100.0 34 ................................ TACCAGCGTCAAGATAAGCTCAATTGCCGCGTCT 130440 32 100.0 36 ................................ TAATGGACTGGAGGTGAAGAGTTGGCTGATAAAAGA 130508 32 96.9 0 .............C.................. | ========== ====== ====== ====== ================================ ===================================== ================== 6 32 99.5 35 GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Left flank : CCCTGCTAGGGTTGAAAGGAGGGGCGTATGACGATTCCTATATGGTTCCTTAATGCAATTCGTCAAAGGCTAGACTTAATTATGCTGGATATTGAACGGCAGTCAGAATGGCGTAAGATTCGGGCCGAAGAGCGAAGCGCCTTTGCAGGGATGTTTCCTGGTGAGGATAAAATGAAGGGGGCAGATTATATGGAATGGGAGGACAAGCATCTATTCAGACGAGCTGTGGAAAATGAATGGCTATATACCCAAGGCGTGAAGGATGGTATTCAACTGATTATTGGTATAATGAAAGAAGGAAATAGTAAGTAAAGGTGGGAATGCTTTGATTGGTGCGAACCCCAAGCTCACATGATTTTCCCGGGAGATTCGCACCACGCGTCCCATAAGGGCTCATCGCATTTTAGCCCCTTTTTTGCTATGCTTAAGACAGCCTTTTTGCGAGATTCGCACTTTTGAAGCCCTGAGCCCTTGCTGGGCGCGGGCTCATTTGGGGCGGA # Right flank : TGATGCCCAGATGCTGATTGACAGTGATTGGGATTATTGCTATACGGGAAGCGATGAACATCCAATCCGCAGAAATTTGGATCCTGCTGGCTCGGCCAGAAATTTGACGATAGATGAACTATCCTTAATTGTGAAAATAGTAGTATTGCAAAGCAAAAGCTTTGAGCAGCTATCCGCCGAGCTTGCCCAATGGCCGCTGGTTGTGTCAACACATGGTAATGAAAGATTGTAGATATTAGCCCAACCGGACTCGACAAATGGTCTGGTTTGCAGAAGCTAGGCATAGTAGCTGGGAGCTATACCGCTTTTGGAAATGATGCCAATGATATTTCAATGTTTCAGCATGCTCGCTCCTCCGTGTGTGTTGGGGAGCATGCAGCGCTCCAGAACGTAGCAACGGAGTGCGTTAGTTCTGATGAAGCAGCAGTTCGCTAAGCTGGATGAAATGTTCGACAAATATCGTCATATCATCAAAAGCTGAGATACTAAAAGATAAAGGC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 132746-133040 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORR01000002.1 Paenibacillus antibioticophila strain J41TS12 sequence002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 132746 32 100.0 33 ................................ GGCCAGACGATGCGCGAACGCGATCCCGACATT 132811 32 100.0 35 ................................ CAACATCCAGCGTAGTTCCGCTATCCGTCTCTCAA 132878 32 100.0 33 ................................ ACATCAGACAAAAAATATACATGCAAGATTATT 132943 32 100.0 34 ................................ TCATCAAAATGACACTGACCTTCAGTGTCCCGTC 133009 32 81.2 0 .............C.A.......AG..A...A | ========== ====== ====== ====== ================================ =================================== ================== 5 32 96.2 34 GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Left flank : TGCACCCGCTGGAACATGCAATCAATAAAGAACATTTGAAGCGAATTAACTTAGAAATTGGTCGACCCTTGAGAAGATATGATAGTATACTGGATTATATCCCAACGCAATATATTGCCAACTATATCCAAAGTATTAGGTATGAAGGTAAGCCGGAGTATGCTGGGATTGAATACAACAGCACGGTTAAGTTGGACGGATATAATCTGGCGATTTTCTATCCGGATATTTTCCAGTGTACCGATGTTGAAGTGTATCTTATTAGCGACTTGAACCTACGGAAAAGAGAGAATATAGACGACGCATCTGTGTAACCTTATAGTAAATACGCTGGTGCGAACCCCAAGCGAACATGATTTTCCTGGGAGATTCGCACCACGCGCCCCGTAAGGGCTCGCGGGATTTAAGCGATTTTTTCGCTAGCTTTTAAAGCGCTATTTTTGAGATTCGCACTTTTGGGCCGCTGAGCCCTTACTGGGTAAGGGCTTATTTATGGCGGA # Right flank : ACCAGAGCAGGGATTATTTTGCGTGCTTCTCTTTTACACTTTGCTTTAAAAAGGATAGAAAGGTTTGTCCCGCTTTCGACAGGTAGGCTGTTTTATTGCTGGCAATGCCTAATTGCAGGAAAATAGGAGGGTTCAGGGGAAATGCCTTGATTCGGGCTGTAATTGGACCGTATATCTCATGGACTTGATTTTACTTACCCAGTAATCAAGTCCATTTTCTTTCTTGGGCAAGTAATCCAGCCTAAATCATCATGTAGCAGATTATTAGGAGTTGCTATCTCTGTTTTCTTTGGGCCTCGTCGATTAACAATTCGGCTGTAAAAAGCGGCAATACGGGTATTTTTTAGAGACTTTTGTTCGTTTTCGAACTCCTCCCAGCGGTTTCCTTACTTCCTGGATAAACGGCTGCTCACGAAGCTAAATGGTTTTCAGCAGGGATTACCGACTTTATACACGTGCTCAGGCAACAATCGGCGGTTCATGAAGTTTTTTTGTACTTC # Questionable array : NO Score: 8.87 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //