Array 1 4783-2618 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYOW01000036.1 Photobacterium angustum strain A2-3 CFSAN065425_35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4782 29 100.0 32 ............................. GTTTGGAACATCCTCACCATCAACAGCATCTG 4721 29 100.0 32 ............................. ACTTGGTAATGAAGAAGCATGACCAAGGAAGA 4660 29 100.0 32 ............................. TTGATTTGAATTAGTTAATGCATTTTTGAAAA 4599 29 100.0 32 ............................. TGTCCTCAATAACCGCGTCAAACTCAACACCG 4538 29 100.0 32 ............................. TGTGGGCGCTTTAGATGGTAATAGTGTCGTAA 4477 29 100.0 32 ............................. CTGTTTGACTGTATGCATTGTACCGTTCCCAT 4416 29 100.0 32 ............................. GTCTGATTTATCCGCACGTGAGTATATAAAGT 4355 29 100.0 32 ............................. TTTACAATGATTTAATTAATCATAATAAAGCA 4294 29 100.0 32 ............................. AACGCGCGAACTATCTTAAAATTATGATTGAA 4233 29 100.0 32 ............................. TTCACCAAGTATATTATGAAATATGCTGAGAT 4172 29 100.0 32 ............................. ATACGATCAAAAACATTATTAATATTGCAAAG 4111 29 100.0 32 ............................. AGGATCACCCTTGATAATAAATCTAGGTTAGA 4050 29 100.0 32 ............................. TTATAAACCTGACGGTCTGTTAAATGCTGAAT 3989 29 100.0 32 ............................. AACATTCACAACAATTTTGAGTGATAGAGATA 3928 29 100.0 32 ............................. CATTTAGTGATAAAAAATAAGGTTGGCTACCA 3867 29 100.0 32 ............................. CGCATTCAGCTTTCAGGCTGCATCAGTGAAGA 3806 29 100.0 32 ............................. ATTCTGATAAACGCCACCGTTGTCATCATTAA 3745 29 100.0 32 ............................. TACAGACTATAACAGCCGAGGATATAGCGAAT 3684 29 100.0 32 ............................. GGATTGCGGAAAATTTCATATCAAAAACGCAA 3623 29 100.0 32 ............................. ATCGTGCGGGTTTTATTAGTCGATACCGTTAT 3562 29 100.0 32 ............................. TAGTGGTACTCAGTATCATTGACAAAACCGAT 3501 29 100.0 32 ............................. TATCTTTTAACGATTGGTTAGCGTTTCGGATA 3440 29 100.0 32 ............................. GGAAATCCCCATGATGAGAATATTGGACCTAA 3379 29 100.0 33 ............................. ACATCGGCACCTAACAGTTCACGCAGCTTTTGA 3317 29 100.0 32 ............................. CTACTAAATAATTCCTGGCTATCTAATTCACC 3256 29 100.0 32 ............................. ATTAAAAACATTTAACTTACGTGACACGAAAT 3195 29 100.0 32 ............................. GTTCGGGCTATTTACGCATTCGTGATATTGCC 3134 29 100.0 32 ............................. GTTAACAAGGCTAATTGTATTGGTGAGATCAT 3073 29 100.0 32 ............................. ACGGCACATTTAGTATTAATCAAACCCCTTCA 3012 29 96.6 32 .............T............... ATCTCGGTATTGTATCCACGTATCGTGACGAT 2951 29 100.0 32 ............................. GGATTTTATACACTTCTATGATTCCGATTTAT 2890 29 82.8 32 ..........T.T.T........G....C TTACCAGGAATCAGCTTGATTGAGGCTTCAGT 2829 29 79.3 32 ..........TG..TA.......G....T ATGCAAATAAAACTTCTATCCAAATCGGCTGG 2768 29 86.2 32 A.........T.T...............T CATGACTCTATAAACAGGATAAAATTCATCAT 2707 29 75.9 32 ........T.TCTT.A.......G..... CAAAAAGCGTAACAAACAAAAGCGAGGCGGAG 2646 29 72.4 0 .C......TTT.T..A...........TA | ========== ====== ====== ====== ============================= ================================= ================== 36 29 97.0 32 GTGTTCCCCGCACCCTCGGGGATAAACCG # Left flank : CACTTATCGATGAAGTACTCAGTGCGGGAGATATTACAGCTCCTGAACCTTATATAGATGCGCAACCTCCTGCTATACCAGAGCCAATTACGATTGGTGATAGTGGCCATAGGAGCAAATAGTTTATGAGTATGCTTGTTGTGGTTACTGAAGTGGTACCGCCTCGATTACGAGGACGTCTTGCAGTTTGGTTATTAGAAGTTAGGGCTGGTGTATATATAGGGAACGTTTCTCGAAAAATCAGAGAAATGATCTGGGAACATATTGAATGCCTTGCTGAAGATGGCAATGTTGTAATGGCGTGGGGAACCAATACCGAATCAGGTTTTGACTTCCAAACTTATGGCAAAAACCGTCGAGAGCCCGTTGATTTAGGCGGGTTACGTTTAGTGAAATTTTTACCTGCAGACATGATTACTGAATGAAAAAATGTTCTTTAAAAAGTTGGTAGATCTTCAATGGTAGTAATTTACCTTTAAAATCAATATATTGTATTTAGA # Right flank : ACCAAATTTACCCATTCAATATCGGGGTTTTGATTAGATGTTTTAGGTTGAAGTCTTATAATTTTTTGTGTGTAAAAAGCACTCATAAAGTGTTGAACAAAATAAGAAGATAAATGGCTTTAAAGCTCAAATTTTATGAGAGCTTATACAAATTTAACATTCATAAATAACTTAATTTTGTTCTATTTCTTTTTTAATTCAATAGCGTGTTGGTTTAAGCCTTAAGTGTATTCTTTTACGTGAAAGTTAGAATACTTATTTGCAAGGTTGTTAAGTGCCCATTGAGCTGTAGGACTATGACGAATAAATATGAAATTATTTGAGACTATTTCTCTGAAATTCCCAGAGATAAACGATGTAAATTGCAAAATTCACTTGGCTGTATGGAACGGAAAAGATAATCCACTTGATATTTTCTTAGCTGGAAATTTTGAAGAATGGCAACGCTGGCAATCTAAGCGTAACTTCGAAAGAGAGTTCATTGTTTCACTGATTCAACT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCTCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.70,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [31-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //