Array 1 9411-11238 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDV01000066.1 Moritella viscosa isolate K56, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 9411 28 100.0 32 ............................ AAAATCAACTAGCAAGATTGATTATTCTGGTG 9471 28 100.0 32 ............................ TTTTCAAGTCGATGATAAAACAAGATTTAAAG 9531 28 100.0 32 ............................ CCATTGCAACTAAAAAATGGAAGTTTAAATTT 9591 28 100.0 32 ............................ GCCAACGCTGGCGGCGAAAATGAAAGAGTACA 9651 28 100.0 32 ............................ TTAAGGGTTTTAATCCATGAGTTAAGGCGAGC 9711 28 100.0 32 ............................ TGAGCAAGTACGCAACGTTTGACGAGTGGATC 9771 28 100.0 32 ............................ ACGAAATGTGGGCTAGCCAGGAGGAGAAATAG 9831 28 100.0 32 ............................ AGAGCCTGTATCACCAGTACCGGAACCAGTAC 9891 28 100.0 32 ............................ TAAATTAATTGCTGCATTATTTGTAGCTGTTG 9951 28 100.0 32 ............................ AGCTGAAATTGACAAAGTTGAGTTATTGATTG 10011 28 100.0 32 ............................ CATGGTTAATGTCTTAATGACAACGGTTTTAA 10071 28 100.0 32 ............................ AGAAGCCGCTTAGGTCGCAGGCTACGAGGTGG 10131 28 100.0 32 ............................ AGCAGCAAATGCTGAAAATGATGAAAACATAA 10191 28 100.0 32 ............................ ATAATCAAAATGGTCATACACTTCCTTTAGTA 10251 28 100.0 32 ............................ AACGGCCACGCATGTACTCAGGGAAACTATCG 10311 28 100.0 32 ............................ CCAGACCTGACTTTTTGAGTATATGATTTTGG 10371 28 100.0 32 ............................ AATCAAAAATGACAACGCAACAACAGAAGCAA 10431 28 100.0 32 ............................ AGATGAAACTGATTTGATAATCAAAATATCTT 10491 28 100.0 32 ............................ AAGACGAAAAGATTGCACGGCTTTGCAGTAAA 10551 28 100.0 32 ............................ CTCCGAAATTGGCACGCTAGTAAGAACTGGAA 10611 28 100.0 32 ............................ TCGTTAATCGGGGCTTTTTTTGGATGTTTTTT 10671 28 100.0 32 ............................ AAGTGCAGAAACAGTAACAACACCTGCTGTAA 10731 28 100.0 32 ............................ AAGACAAGGCCGAGTATCAAAAAAAACAAGAG 10791 28 100.0 32 ............................ TAACTTTGACGGGTTGTGAGCACCCATTGGTT 10851 28 100.0 32 ............................ GAAAAAAAAGCCCCGAAAACGAGGCAATTAAT 10911 28 100.0 32 ............................ TCCAAAAATCATAGAACGTGCTTTAACAAGCG 10971 28 100.0 32 ............................ TAGAGGGTGTTAGGTCGTCGTCTTTATCTTGG 11031 28 100.0 32 ............................ AAGGCACAGGTAATGCAAAGAACTTATTTCAA 11091 28 100.0 32 ............................ ACCGCTTGCACCATACACCGATAGCGTTACGC 11151 28 96.4 32 .........T.................. ATGGCGTCTTGCGTAAATAGCTGCTGTCATAA 11211 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 31 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTAAATAAGTTGTTTGAATTAAATTGGCTTAAAGGTTTACGTGATTATTGTACTCAAACATACATTTCATTGGTGCCAGAGAGTTGCCAGTATTGTAGTGTAAAGCGTAAACAAGCTAAAAGTGCTAACAACAAACGTAAACGCTCTATCGCTAAAGGTTGGTTAAATGCTGAAGAGGCAGCATTAAAAATTGGCAATGAGCAGCAAAAAATACTGCGCTTACCGTTTGTTCAATTAAAAAGTACATCTACAGGGCAGGTGATGAAGTTATTCATTGAGCATAGCGTATTGCAAGATGAAGCAGTTGAAGGGACGTTTAATAGCTATGGGTTAAGCTCATCGGCAACAGTTCCTTGGTTTTAACAAAAAATAACCCAAAAACTGTTCTTTAAAAACGAGTCAATGAAATCAGTGGGTTACAATAGGTATAAAAATTAGGTAAAAATAGATATTTTTGCTTATCTGCTTGTTGTAACTTATTTTTATACTGATATTCTATT # Right flank : AGATTGAGACTCTTCTTTAATAGAAACTGTTTTGTTCACTGCCGTACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 49-1096 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDV01000067.1 Moritella viscosa isolate K56, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 49 28 100.0 32 ............................ AATATGGATGTTAAATCAATAGTTGCTGATGA 109 28 100.0 32 ............................ AAATATGTGTGCATTGTAATTATGTAAAAGAT 169 28 100.0 32 ............................ ACAAGAGCTAATCGAGTTACTTACTAAGACTG 229 28 100.0 32 ............................ ACCGCGAATCGTGGTCAATAGCTCTTTTGCTT 289 28 100.0 32 ............................ ACCGCAGCCCGGTTTCGTCCTCTGCGTTCATT 349 28 100.0 32 ............................ TGATGGTACGGTTCTAAACGGCAATGGTGTTT 409 28 100.0 32 ............................ ATTGGTGCAGATTTAGGAAGTGTCCAGATCGC 469 28 100.0 32 ............................ CAGGAGAACGCCATAATAAAATAGATATTACT 529 28 100.0 32 ............................ CAAGGGCCATTCGGCTTAGCCCATGTGATATG 589 28 100.0 32 ............................ TCTGTATGTGCAAGGTTCTATAAAACATACAT 649 28 100.0 32 ............................ GAACAAGTCGAAAAGATTGTAGATTTTAGTAC 709 28 100.0 32 ............................ TTGATTCAACTAAACATTCGCTATGGCTTGGT 769 28 100.0 32 ............................ AAGACCCGCATCACGATAAATTTTAACTAGAG 829 28 100.0 32 ............................ ATGATATTCGATTCGATAAAACCAGAAAGTTA 889 28 100.0 32 ............................ AAGGTTATAGACGTGTAATTACGTGTGCGCCA 949 28 100.0 32 ............................ AAATGTAGCAAGTTAAATCTATTGATTCATTC 1009 28 100.0 32 ............................ TGATGGCGTTGCGTGTGTGTAATCATCAACAA 1069 28 89.3 0 ...........A.T...........T.. | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACAGGCAGCTTAGAAATCTTGACAGTTGACGCCATTTAACTGTTTGCAG # Right flank : ATTGTATATTGTTATGAACATATTCAATCCATTTTTCTGAGTTCTATTAACTGGTTTGATTGGCGCTATTCTTGCGTTCCCTATTTATAATATAATCGGTATTAGCTCAAGCAATTGCTAATGCAGTTGTTGATGAGGTCACTGCTAGTGCGGAAGTTAGCGTGACAGGTGGGAGTTCAAAGGGACTGTATAAGGTAAGTTAAAAGACAGTGTAAACTATCGCCACTCTATCGCCACCTTTAATTTGATCGCCTTTAAGTTGTTGATTTTAAATTGGTTTAATTTGTATTTATATTGAAACCGGTAATATAAACAGTGAAGGGCACTACACTTGGATAGATATTGAATTAGCTTAATTTATCGTGTTGTAACTAACTTGTTCTAACTCAGTTATCGGATACAAGTGAGTTACAACTTAAGCTTCAAAGCTGTCGGTTAGAATGACTGAAGTATGGAAAAATTAACACCGCCAGAACGAACAAAAGTAAACTGTTTACAGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //