Array 1 631374-633620 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWV01000001.1 Clostridium perfringens NCTC 8239, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 631374 29 100.0 35 ............................. GTTAATACTATTATAGTTATTTCTGAGGCTTGGTT 631438 29 100.0 36 ............................. GTTAAAAAAACCTCTTGATTTATAAATTTCATATAA 631503 29 100.0 36 ............................. GCTAAACCAGCTTTTTTAAAATCTATATCAAAATGA 631568 29 100.0 37 ............................. ACGGCAATGCACCAACATCAGCACCAGAAACAACTTT 631634 29 100.0 36 ............................. AACCAATCTTGAGGAATTATAACTTTAGCATTATAA 631699 29 100.0 35 ............................. TTACCATTAAATTTACCGTTTAACTCTCCCTCCAA 631763 29 100.0 37 ............................. TTATAGAAAAAGTATAAACAAATTTAGGCTCTATAGA 631829 29 100.0 36 ............................. TTCATTATAAAGATAGAAGAAAACTATCTATTTATT 631894 29 100.0 36 ............................. ACCATAATTATAAGACTTACAAGACCTCTCTAACTC 631959 29 100.0 37 ............................. TTGGTAATATCCCACGGAATACAAAATGGAAAAGCTT 632025 29 100.0 37 ............................. TTTAATTGTAGATGCAATCATATCATTTTTATCCATC 632091 29 100.0 36 ............................. TACTATCATGAAGGTAGAAAAGTTCTTGATGAACAA 632156 29 100.0 37 ............................. AAGTACAAAAACATCTTAGATTATAAGCTAGGGGACA 632222 29 100.0 36 ............................. ATATAATAAAGGCAAGTAAATAAAAGATACTTCTTT 632287 29 100.0 36 ............................. TGCATGCTAGGGTTACTATGGATTATATTTATTTAA 632352 29 100.0 36 ............................. GTTTATTCAATTTAACTTTACTATTATAACTACCTA 632417 29 100.0 36 ............................. TTATGATTCTGCAATTCGAGAGCTTTTTGAGTACAA 632482 29 100.0 35 ............................. TTGAATTTACCATCAAGTTCTCCTTCTAAAGCCTT 632546 29 100.0 36 ............................. TTTTCTTAACATCAAATACCTTATTTTCATCACCTT 632611 29 100.0 36 ............................. TTTAAAGGCTACGCTTCGCTATGTCTGCGACGCCAC 632676 29 100.0 36 ............................. CCATTACAACCAATAACAGTCACAACACAATAAGTA 632741 29 100.0 37 ............................. ATACAAACTATAAAAAAATAGCTAAGATTATTATTAT 632807 29 100.0 36 ............................. AGCAAGTAAACTTGCTATATGATGTTTTTTATCTTC 632872 29 100.0 36 ............................. TATCATACATAATATTACCGTCATTATCCAAGTTAC 632937 29 100.0 36 ............................. ACTGTTGAATCAGGAATTTTAGACAATGCTTCTAAA 633002 29 100.0 37 ............................. CTCATATCAGTTGGGTAGGATGGGAATCTATTACAAA 633068 29 100.0 37 ............................. TCAGAATTTTTATTAATTTCACCTGAACTTTCTTCTA 633134 29 100.0 37 ............................. GTTATTATTTCAACTTTTCTTTTTATCTCTTCATCCC 633200 29 100.0 37 ............................. AGAAAGAAATCATTGACCCTATAGGGAAAAGCCAATT 633266 29 100.0 35 ............................. TTATTCCCTAAAGCGTTCTTATTCCCTTTAGGAGC 633330 29 100.0 35 ............................. TTATGTAACTAAGATTACAACTTTTATGAAATGGT 633394 29 100.0 37 ............................. TTTATAATGCTCTCGTTGATCATCTGTTAGTTCAAAC 633460 29 100.0 36 ............................. TTTTGATTTAACTCTACAAGCTTTAAGCAACTCTCT 633525 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 633591 29 86.2 0 .................GAA....C.... | T [633618] ========== ====== ====== ====== ============================= ===================================== ================== 35 29 99.6 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTGAAATTTGGG # Right flank : TATATATAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATAAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTAATACTTAATACTTCCAATATATATGATAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTGATATATACTTATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTACATTTAATAGCTCCCTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //