Array 1 1-328 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDU01000053.1 Moritella viscosa isolate Vvi-7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1 28 100.0 32 ............................ TAAAGATCATAAAGCAAATATTGAAATTAAAA 61 28 100.0 32 ............................ TATACAAGGTTGCTGTAAACAAATCATCCACA 121 28 100.0 32 ............................ ATTTGACGATTGTCTTGCTTTGAAACTTGTTT 181 28 100.0 32 ............................ ACAAGGTTTACCGTCACGGTCGAACCCGTCAC 241 28 96.4 32 ...T........................ TGATGGCGTTGCGTGTGTGTAATCATCAACAA 301 28 89.3 0 ...........A.T...........T.. | ========== ====== ====== ====== ============================ ================================ ================== 6 28 97.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : | # Right flank : ATTGTATATTGTTATGAACATATTCAATCCATTTTTCTGAGTTCTATTAACTGGTTTGATTGGCGCTATTCTTGCGTTCCCTATTTATAATATAATCGGTATTAGCTCAAGCAATTGCTAATGCAGTTGTTGATGAGGTCACTGCTAGTGCGGAAGTTAGCGTGACAGGTGGGAGTTCAAAGGGACTGTATAAGGTAAGTTAAAAGACAGTGTAAACTATCGCCACTCTATCGCCACCTTTAATTTGATCGCCTTTAAGTTGTTGATTTTAAATTGGTTTAATTTGTATTTATATTGAAACCGGTAATATAAACAGTGAAGGGCACTACACTTGGATAGATATTGAATTAGCTTAATTTATCGTGTTGTAACTAACTTGTTCTAACTCAGTTATCGGATACAAGTGAGTTACAACTTAAGCTTCAAAGCTGTCGGTTAGAATGACTGAAGTATGGAAAAATTAACACCGCCAGAACGAACAAAAGTAAACTGTTTACAGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-807 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDU01000051.1 Moritella viscosa isolate Vvi-7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ CTATTGATGATTTTGAACAAGCCATAACTAAC 61 28 100.0 32 ............................ AGCGACCGTAGCTTATGAAGATCATGACTACA 121 28 100.0 33 ............................ CACTTTAGAGAAAATTATATGTCACCAATTAAT 182 28 100.0 32 ............................ TAGTCGATATATTGGTGTATATACGTGTGCAT 242 28 100.0 32 ............................ GCAGCGGGTGGCGCTTCAAAAATGATGCAAGG 302 28 100.0 32 ............................ AAACAAACCTAATAACAAAATGAAAACGTAAA 362 28 100.0 32 ............................ TCCAGAGCCACCACCTGAGCCACCGCCAGTAC 422 28 100.0 32 ............................ AGATAAGAAACCATCGTGGATAAGAGAGCAAG 482 28 100.0 32 ............................ TGATACTGGAGCAGGGATTGGTTATATTGATG 542 28 100.0 32 ............................ TCAACAATAGAACCGCAGACCTGATACTGGAG 602 28 100.0 32 ............................ GTAACCAGACCTGATACAGCCGCGATTTCATC 662 28 100.0 32 ............................ TGTAAACGTATTTACGCGACATTTCCCTAATT 722 28 100.0 32 ............................ GTGTAGGTGAAACATTAGCAAACACATGCTTA 782 26 92.9 0 ..........................-- | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : | # Right flank : | # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 29889-30216 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDU01000176.1 Moritella viscosa isolate Vvi-7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 29889 28 100.0 32 ............................ TAGAAACAAAGTCGCAAGAGATCGCAAATGTC 29949 28 100.0 32 ............................ ACGATAAAGGTTACAGTCTGATCCGTGGCAAA 30009 28 100.0 32 ............................ TACCTAACAAACCATATTGCGCCCACGATAAA 30069 28 100.0 32 ............................ TTGGCCGTAAGGATCACTGGCGACCAGTCCAA 30129 28 100.0 32 ............................ TGTACTTAATGGCAAAGAAACATAACCAGCCT 30189 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTAAATAAGTTGTTTGAATTAAATTGGCTTAAAGGTTTACGTGATTATTGTACTCAAACATACATTTCATTGGTGCCAGAGAGTTGCCAGTATTGTAGTGTAAAGCGTAAACAAGCTAAAAGTGCTAACAACAAACGTAAACGCTCTATCGCTAAAGGTTGGTTAAATGCTGAAGAGGCAGCATTAAAAATTGGCAATGAGCAGCAAAAAATACTGCGCTTACCGTTTGTTCAATTAAAAAGTACATCTACAGGGCAGGTGATGAAGTTATTCATTGAGCATAGCGTATTGCAAGATGAAGCAGTTGAAGGGACGTTTAATAGCTATGGGTTAAGCTCATCGGCAACAGTTCCTTGGTTTTAACAAAAAATAACCCAAAAACTGTTCTTTAAAAACGAGTCAATGAAATCAGTGGGTTACAATAGGTATAAAAATTAGGTAAAAATAGATATTTTTGCTTATCTGCTTGTTGTAACTTATTTTTATACTGATATTCTATT # Right flank : TAGCGATAGATAGGGCAATGCCTTTGATCTCATGTTCACTGCCGTACAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-928 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRDU01000052.1 Moritella viscosa isolate Vvi-7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1 28 100.0 32 ............................ ATGAATCTTTCGGCGTTTCATATTTCTTTAAT 61 28 100.0 32 ............................ GGTAAAGGAACTTTTGATGGCATTTACGATAA 121 28 100.0 32 ............................ CATATGTACAAATCAGCGTTCTCGCTGTGAGC 181 28 100.0 32 ............................ AAGATGCGGCTGGCATCGGATTTGGCCCTCGC 241 28 100.0 32 ............................ AGCAAGAGCAAACTCTTTAGCAAGCGCATTTG 301 28 100.0 32 ............................ CCACAGCGCATGGATTGTTAATGATGCAGCGT 361 28 100.0 32 ............................ ACCCCCTGTTACAGTGTAAGCCTTTGAAGATG 421 28 100.0 32 ............................ TCTTACCCTGCTCGTCTTTTATGCCGTCACCG 481 28 100.0 32 ............................ GCTAATGGCCTAAGTGCTGAGAAAATTATCAA 541 28 100.0 32 ............................ AACACTCGCACCGCAAGTAGCGCCAAGACCCG 601 28 100.0 32 ............................ AACAGCAACAAGTTCATTAACAAGTTTGTCAC 661 28 100.0 32 ............................ ACTATAGTTACAGCAGATTTCACACACAAAAC 721 28 100.0 32 ............................ CGCAGCGAGAGGGCCCCCGGGCGGAGTACCTA 781 28 100.0 32 ............................ TATCGTAAAAGTCACGAGGGAAATAAGTCATG 841 28 100.0 32 ............................ ACCGCGAATCGTGGTCAATAGCTCTTTTGCTT 901 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : | # Right flank : TCAGGAAGGAAATTAATATGATTTTTAATGTTGTTCACTGCCGTACAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //