Array 1 1535177-1534549 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JH815593.1 Staphylococcus massiliensis CCUG 55927 scaffold00001, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1535176	    36	 100.0	    30	....................................	AAATGACAACGAATAACAAACTTATCGACA	
   1535110	    36	 100.0	    30	....................................	GGCATCCGGTTTCTTAACCTTAATAGATGC	
   1535044	    36	 100.0	    30	....................................	TATGAAACAGATGAAAAAGGCGTATCAAGA	
   1534978	    36	 100.0	    30	....................................	TATGAAACAGATGAAAAAGGCGTATCAAGA	
   1534912	    36	 100.0	    30	....................................	TATGAAACAGATGAAAAAGGCGTATCAAGA	
   1534846	    36	 100.0	    29	....................................	TGTAACTGGTCAAACAACTGGTTATTCTG 	
   1534781	    36	 100.0	    29	....................................	AAACACACACTATTAATTTTTTAGATGGC 	
   1534716	    36	  97.2	    30	................T...................	TGGGAAGATTGCACGACTCTATTTGAGCAT	
   1534650	    36	  97.2	    30	.............A......................	ATTGATGTTGCGTAAGTAACTAACCACGTC	
   1534584	    36	  86.1	     0	...............................TCAAG	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	  98.1	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC	                              	       

# Left flank :   CAAATGAACAACCTATCAAATAACAAAGGGCTACTGATTTATCTTTACCCTGAAGCGAATTTAAGCATTAAAGAACGATTGATCTTCAGGGAAGTACTGAATGACTTACCAATTAAAATCATTGTGCTAACACAATCTCGCTATTTTCTAGCAGACTCTATTGATGGATTAAATTATTTACGTAATTCTAAGCAAATGATTACAGTCGATTTTATAGAAAATTGTTATTGGGAAGCACCATTGAATTTTAAGAGGGAAGATATAGTAGTTAGTTTGAAAAATGTTTTTGATCAATATAGTCACTGTTTTGAAATTCATCCAACTATAACGAATTATCACCTGGGTGATATAATGGTATTCAAAGATATAGATATCTATGTAATTGTACGATTTCTTAGATTCTGTAAATTAGATTACATTTTAGATATTGATGATACTAAAATTAGTGAACCACTGGCATTATATTTAGGTTTAAGTACAAGTTAATTGATTTACTAGAG
# Right flank :  ATACTGACTTCAAAAATTTCTTCAATGAAACTCAGTATTCAAATTTTAAATCACTTCATAGCGAGATTGAGGATCTATCCTTAATTCTCGCTTTTTTATTCCCCTAAAACACTTAGGAACCATTTTCAACGAGTTGGGCAAAATGTACCAAAAACCCCACTAAATTTAATAAAATACTTTTTGTTAAAAGTAATCAGGAAACTTAAGCATCCACAAACACAAAAATTTACACGGGGGTTCTAAATGAAAACTTTTGCTTTTAAACGAATTGTATCTTTAACGCTTGCGACAGGGCTATCTTTCACGACGTTCGCATACTCAGCTCATGCGGACGAAACGGTTCCGGAAGCACCTATTAAAGAAGGCTCAAATTACTCAAATCAATTTAATCCAAGTGCAGTACCTGAAGACGCGCAGTTAAGCGACCTTTCATCTAAAGAGAAAGCCAAAGCTCAGGCAGATGATTCTTCTCATAAAAACAAATATCCAGTAGTCTTTCT

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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