Array 1 193019-192438 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMQJ01000006.1 Streptosporangium pseudovulgare strain JCM 3115 sequence06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 193018 29 69.0 32 C..AC.......GG.......AG..CT.. CCGTGCTCACGCAGGATCGCGAGGTTGGCCGG 192957 29 72.4 31 C..AC.......GG.......AG....G. TGTCGGTGGCCATCTTCAGCCCCAGGGTCGG C [192932] 192896 29 89.7 32 C..AC........................ TGCGAGACGTCCGCCGCCAAGCGCGGCCTGGC GCGG [192881] 192831 29 100.0 31 ............................. GTCGAGGCCGCCGGGGTCGAGCTGGCCAACG 192771 29 100.0 32 ............................. CTGAACGTCCCGCTCGGGCTGAGGGAGACTGT 192710 29 96.6 32 ..............T.............. ACCCAGGTGGTCTCCGGCTGGGTGATGTCGTC 192649 29 100.0 32 ............................. GCGTGGAGCTGGGCGGCCTCGTGCGCGGCCTT 192588 29 96.6 32 T............................ ACGGTGCGGCTGCCCGCCCTGACCCCAAGGCC 192527 29 100.0 32 ............................. GGCATCTACACCTGCCCCGGCTGCTCGTCACA 192466 29 86.2 0 ........T....TT............T. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 91.1 32 GTCCTCCCCACGCCCGTGGGGGTGAGCCG # Left flank : GGATACATCAATGTCACTCTACTTGCAGCCCAATCGAGCAATCATCGGCCTGCACCGCGCCATGCACCTAGCTCAGCCAAGTCCTCTTTCTAGGGAGACTCCCGCGCCATGGCCTCCTCGTCGTGACCGAATAGCTCACCCCCACGGGCGTGGGGAGGACGCGGCATCCGCCCTGCTGCACGATCTCGATCGCGGCTCACCCCCACGGGCGTGGGGAGGACTCCAATGGGAACCCCTGAAGGGGGCTGTCACCCGGCTCACCCCCACGGGCGTGGGGAGGACCCCACCCCAGAGCTGTGTCCCTGGATCGGTGGCGGCTCACCCCCACGGGCGTGGGGAGGACGTGGCCGTCGAGATGACGAGGTTGTGGCATGACGGCTCACCCCCACGGGCGTGGGGAGGACTCCTGCCCAGCGGCGATACCACGGGCGAGCTGCGGCTCACCCCCACGGGCGTGGGGAGGACAGCAGCCCGGCCGCGGCGACGATGAGCGTGAGCGG # Right flank : AGCCTCAGTCGACGTCCAGCCAAGGGGCCTCCTGGGCCCTCAGGAGATGGGCGAACGGTTCAAGTCCCCCCTCGGACACATTCGATGGCTCAGGAGTCCTGGTCGCTGGAAGAGCGGCCAGGACTTCGTGCTTTCCGGGTCGTGAACCGGTCGGGGACCCGGGATGTCGTGGGTCATGGTCTTTCCGACGAGGCCCGCCGTCCGGAGCGTTTCCGGCGGCGTCCGGCGGGGCGGGCGCACCGGGAGGGGCGGTCCGTGGTGGGATGCCGCCGGCTCACCGTCCGGTCACATCCTGAGCCGGAAGGGCAGCAGGGCGACGACCACGTCGAGGTGCTCCCGCAGTACGAGGGCCATGAAGAGGCCACGCTGGTTGTGCAGTATCCGGTAGCGGAAATGCCTCGGCTCGATGAGGGGGATGAGGACGATCACCCGCCTGCCCGTGGCGTCCGCCGCGCGGACGTACTCCAGAACGGGATGCACCACCGTGCGGTGGGGGTTCA # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCCCGTGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCCCGTGGGGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.50,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //