Array 1 73718-71416 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJJC01000005.1 Campylobacter lanienae strain P0007 .11822_4_13.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 73717 37 100.0 34 ..................................... TATTAATCTTCCTTTTAATTTAACTATCACGCTT 73646 37 100.0 38 ..................................... GCGAAAATATATCAAGAATAATTATGAGAGAATAAAGC 73571 37 100.0 34 ..................................... TGTATCACTCTCATATGCTCTATTAGCATATTAA 73500 37 100.0 37 ..................................... GGCTGGAGTTGGCTCTAAGATTATTGAAAGAATAGTT 73426 37 100.0 36 ..................................... TTATAAACAGGGTGATAATGTTACCATTCTCAATGC 73353 37 100.0 36 ..................................... TTACCGATGCTTTAGGTATAATGCCACGCCAACCGA 73280 37 100.0 36 ..................................... TATTTAAAAGCTCTCACTTCGCTATCCACCACCTTT 73207 37 100.0 36 ..................................... ATCACTTCGGTATTCTGCTTTGTCTATAGGGAATTG 73134 37 100.0 37 ..................................... TTATGAAGCGTTGATTTTGGGGTTTTTAATTGACAAG 73060 37 100.0 37 ..................................... ACTTAGGTGGCGTGAGTGTAGATATTAGCGTTAATTT 72986 37 100.0 35 ..................................... TTAAAATAAGCATAATTGTTGCTATCACTTTCGCT 72914 37 100.0 36 ..................................... AGGGCGTTCAAGTTGATTAATTTCTAATAATTGCGA 72841 37 100.0 35 ..................................... CGCAACAAAATATCAAATACAAGCAATTACCGAAA 72769 37 100.0 36 ..................................... TATACCACTTGCCTTTTTTTCTATGATGATATTCTG 72696 37 100.0 36 ..................................... CAAATTTAAAGTCTATTTTATCATAGTAGCCAAATA 72623 37 100.0 36 ..................................... TTGATGGGGAAGAATGGAATTGGCGTGATGGCGAAT 72550 37 100.0 37 ..................................... TAAATTGTGCTCTATCAATATAAAGCCCACCTTCTTC 72476 37 100.0 34 ..................................... TAATAAACAAAAGAAAGAAGCCGAGAGCAAAAAA 72405 37 100.0 34 ..................................... GAATGCCTTAAATAATTTTGCGGATACCGCTAAA 72334 37 100.0 39 ..................................... TTGGTAAAGCATTTAACACTATGACGTGGCAAGATATAA 72258 37 100.0 36 ..................................... CTAAAATTAAGTGGACAGCTTTATGCTATATTTTGC 72185 37 100.0 36 ..................................... TTGAAGTTGTGCTATCAATTTATCTAAGCCACTTAA 72112 37 100.0 38 ..................................... TCTACTAGCTCGTTTGTCTCTATAGCTTCAATTAGCTT 72037 37 100.0 34 ..................................... TGAAATTATTAGCTAGATATAAAACTGGTCAAGA 71966 37 100.0 38 ..................................... CTTAAAATAGAATTTGATATTAATAATGCTGTTTATGG 71891 37 100.0 34 ..................................... TTTATGTCGCTGAAGTTGCTAGAGATAATGAATA 71820 37 100.0 37 ..................................... TGATAGGGCTTTCACATTATCAAAGAGCTAAAATATT 71746 37 100.0 35 ..................................... TAGTTTTAACACAAAAATAGCTAAAAAATTGGGAA 71674 37 100.0 38 ..................................... CTAAATAGTGGCGTAACTCAAGCTTATGAAGGCTATAA 71599 37 100.0 36 ..................................... CTTTGTGTCCAAGCACTTGGTGATGCTAGTAAGACG 71526 37 100.0 37 ..................................... CTAGAGCTAATAGTGCTAAAAGCATAGATGAGCTTAA 71452 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 32 37 100.0 36 GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Left flank : GCGTTATAAGAGAGAAAACTTCTCTTACTCTAAATCTAAAATAAGAGAAAATGAAGTTAAAGATAAAGAGATTTATTTGGGGAGATGATTAATAGCAATAATACATTATCATAATAATTATTTATAAATCTAAAAATTTTTTAAATTTTTGATATTTTTAAATAATTCTATTATTTATAGTTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTATTTAAAAACTTCTCTACATTATCACGCTCAAAATATTTATAATATTGTGTAGAGATACGCATTAAAATCATCTCTCTCTCTTAAACTTATCAGCTCTGGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGACAATCTCATCATAAAATAGCTCTATTTGCTCCCCTTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTGT # Right flank : TGCGCACAAAATGCCCTGTTTTAGGGATTTTGTGCTTAGTTAATTGTAAAATTTTTTCCACTTAGAAAAAAATCGCAAAAAGTGGCGAATTTGTGGAAAAATATGTTATAATCCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGTCTTTGACACCCCCGGTTATTCTCTATCATCACAATAATTTTTAAACTCACATTGCGCACAAGCTGTAATGCTAGCTGAGCTTTGGGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGCGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAACATAAAATCACCCTATGAAAAGGCTTTTTAAAATATTTGCTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //